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TRANSCRIPT CARD

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  1. Clone 'ciad059k01' > 
  2. Transcript 'Moocul.CG.ELv1_2.S75...' > 
  3. Transcript 'Cisavi.CG.ENS81.R899...' > 
  4. Clone 'AHC0AAA58YI09' > 
  5. Transcript 'KH2012:KH.C13.179.v1...'

Transcript Model

Transcript Id

KH2012:KH.C13.179.v1.A.SL5-1

Possible name(s)

RRP7A

Gene model

KH2012:KH.C13.179

Location

KhC13 [1,492,380 / 1,496,866]

Sequences

Amino acid sequence

Length: 264

>KH.C13.179.v1.A.SL5-1
QNSTKMENQDNKVYQIKIKAQASCSSCHTLFITNKSKPNVHVLLVSSIPPYCNQHTLHRL
FGKCGKILEVRLQKHANKPINDDQTTDNFPPPPILGFKVAFITFQSNKGINEFIKKTKST
EPWLISNESTKLITGLKKWCLDYIYEQPDPKKLKLEVDEYMTKYDAKVKQEQEEEIENDG
IPDDEGWVKVSSRGRNAGVSRTETNQKKSKRKEKKKRKQNEMFSIYKYQVRESKRQKIAE
LREKFEEDKLRIQAMKEARKFRPF

Nucleotide sequence

Length: 1,424

>KH2012:KH.C13.179.v1.A.SL5-1
GTGTTTTACGTAATAAATATTATTATGGGGAGTGCGTGACATTTTGGATTTAAGTTTTAG
TAGCTGTCAATAAAAAGCGACAACCCTTGTTGTAACACGCACATGGGATTTTGACAGAAT
TCAACAAAAATGGAAAATCAAGACAATAAAGTTTACCAGATTAAAATAAAAGCCCAAGCC
TCATGTTCCAGTTGTCACACGTTGTTTATTACTAACAAATCAAAGCCGAACGTACACGTT
TTACTTGTGTCCAGCATTCCCCCATATTGTAACCAGCACACGTTACATCGCTTGTTCGGA
AAATGCGGCAAAATTCTTGAAGTTCGACTTCAAAAACACGCAAACAAACCAATAAACGAT
GATCAAACGACTGACAACTTCCCTCCACCACCAATACTGGGGTTTAAAGTAGCTTTCATA
ACCTTTCAGTCGAACAAGGGAATCAATGAATTCATAAAGAAAACAAAATCAACAGAACCT
TGGTTGATTTCAAATGAATCGACCAAACTTATAACTGGATTAAAAAAATGGTGTTTGGAT
TACATTTATGAACAACCAGATCCTAAGAAACTTAAACTAGAAGTGGATGAATATATGACC
AAGTATGATGCCAAAGTTAAACAGGAGCAAGAGGAAGAAATTGAAAACGATGGAATTCCG
GACGATGAAGGTTGGGTTAAAGTGTCCAGTAGAGGGCGAAATGCGGGAGTGAGTAGAACG
GAAACGAATCAAAAAAAGTCCAAGAGAAAAGAAAAGAAAAAGCGAAAACAAAACGAAATG
TTTAGTATTTATAAATACCAGGTCCGGGAATCAAAAAGACAAAAAATCGCGGAACTTCGT
GAAAAGTTTGAAGAAGACAAGTTGAGAATACAGGCCATGAAAGAAGCCAGAAAGTTCCGG
CCGTTTTAACAATTACTGCCTGTTAAGTTTCTTTTGTCGGCCAAGTCTCATGGCTTTTTG
GGCCGTGGCTCTGACGGTATTTATTTCAACTGTAAGGTTGTCTTTGCAATTCTACAGTTT
GTAAATATGACGCTTACAGTTGAAACAGGAGTATAAAGACAGGAACATGTTATAACATAA
TATTCCATTTATTACTTGGGGCCGATACATTTAGTACTTGGTACAGGTTTTGCCAAGATA
GTTTGTGTTTTAGATCGCTCCGATATCGAACAAATTATGACAACACAGATTATGAATAGT
TATAATTGTTTCTTTTCTGGGATTCTAAACCTGAGTTTTTGGAAATATAAGTTGATTTAC
AATCTGGATTTAAAGTTTTCTAAACTTAAGGAACACTGATGTAAGTTAAACTGTAAAAAC
AGGAGTCTGGTAGATTATGTTTGTTCGTATTTTGTTTCATCAATATAAAACACATTCGTC
TAAATTTTAATTCATGTTCATGTACATTAAAATCTCAAAGAAGT

InterProScan

Gene3D
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[6-122] 1.5E-7
PANTHER
RRP7 (IPR024326) - T[7-264] 1.3E-55
SUPERFAMILY
RBD_domain_sf (IPR035979) - T[36-112] 2.96E-8
CDD
Rrp7A_RRM (IPR034890) - T[41-143] 5.96775E-44
Pfam
RRM_dom (IPR000504) - T[43-75] 2.2E-4
Pfam
RRP7 (IPR024326) - T[135-264] 2.0E-33

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RRP7A_HUMAN 36.822 % 169 1.26E-51
RRP7B_HUMAN 46.154 % 90.9 2.92E-23