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- Transcript 'KH2012:KH.C13.179.v1...'
Transcript Model
Transcript Id
KH2012:KH.C13.179.v1.A.nonSL4-1
Possible name(s)
RRP7A
Gene model
Location
KhC13 [1,492,502 / 1,496,866]
Amino acid sequence
Length: 261
>KH.C13.179.v1.A.nonSL4-1
TKMENQDNKVYQIKIKAQASCSSCHTLFITNKSKPNVHVLLVSSIPPYCNQHTLHRLFGK
CGKILEVRLQKHANKPINDDQTTDNFPPPPILGFKVAFITFQSNKGINEFIKKTKSTEPW
LISNESTKLITGLKKWCLDYIYEQPDPKKLKLEVDEYMTKYDAKVKQEQEEEIENDGIPD
DEGWVKVSSRGRNAGVSRTETNQKKSKRKEKKKRKQNEMFSIYKYQVRESKRQKIAELRE
KFEEDKLRIQAMKEARKFRPF
Nucleotide sequence
Length: 1,302
>KH2012:KH.C13.179.v1.A.nonSL4-1
AACAAAAATGGAAAATCAAGACAATAAAGTTTACCAGATTAAAATAAAAGCCCAAGCCTC
ATGTTCCAGTTGTCACACGTTGTTTATTACTAACAAATCAAAGCCGAACGTACACGTTTT
ACTTGTGTCCAGCATTCCCCCATATTGTAACCAGCACACGTTACATCGCTTGTTCGGAAA
ATGCGGCAAAATTCTTGAAGTTCGACTTCAAAAACACGCAAACAAACCAATAAACGATGA
TCAAACGACTGACAACTTCCCTCCACCACCAATACTGGGGTTTAAAGTAGCTTTCATAAC
CTTTCAGTCGAACAAGGGAATCAATGAATTCATAAAGAAAACAAAATCAACAGAACCTTG
GTTGATTTCAAATGAATCGACCAAACTTATAACTGGATTAAAAAAATGGTGTTTGGATTA
CATTTATGAACAACCAGATCCTAAGAAACTTAAACTAGAAGTGGATGAATATATGACCAA
GTATGATGCCAAAGTTAAACAGGAGCAAGAGGAAGAAATTGAAAACGATGGAATTCCGGA
CGATGAAGGTTGGGTTAAAGTGTCCAGTAGAGGGCGAAATGCGGGAGTGAGTAGAACGGA
AACGAATCAAAAAAAGTCCAAGAGAAAAGAAAAGAAAAAGCGAAAACAAAACGAAATGTT
TAGTATTTATAAATACCAGGTCCGGGAATCAAAAAGACAAAAAATCGCGGAACTTCGTGA
AAAGTTTGAAGAAGACAAGTTGAGAATACAGGCCATGAAAGAAGCCAGAAAGTTCCGGCC
GTTTTAACAATTACTGCCTGTTAAGTTTCTTTTGTCGGCCAAGTCTCATGGCTTTTTGGG
CCGTGGCTCTGACGGTATTTATTTCAACTGTAAGGTTGTCTTTGCAATTCTACAGTTTGT
AAATATGACGCTTACAGTTGAAACAGGAGTATAAAGACAGGAACATGTTATAACATAATA
TTCCATTTATTACTTGGGGCCGATACATTTAGTACTTGGTACAGGTTTTGCCAAGATAGT
TTGTGTTTTAGATCGCTCCGATATCGAACAAATTATGACAACACAGATTATGAATAGTTA
TAATTGTTTCTTTTCTGGGATTCTAAACCTGAGTTTTTGGAAATATAAGTTGATTTACAA
TCTGGATTTAAAGTTTTCTAAACTTAAGGAACACTGATGTAAGTTAAACTGTAAAAACAG
GAGTCTGGTAGATTATGTTTGTTCGTATTTTGTTTCATCAATATAAAACACATTCGTCTA
AATTTTAATTCATGTTCATGTACATTAAAATCTCAAAGAAGT
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[5-119] 1.4E-7 |
| PANTHER |
RRP7 (IPR024326) - T[5-261] 1.2E-55 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[33-109] 2.96E-8 |
| CDD |
Rrp7A_RRM (IPR034890) - T[38-140] 6.35417E-44 |
| Pfam |
RRM_dom (IPR000504) - T[40-72] 2.1E-4 |
| Pfam |
RRP7 (IPR024326) - T[132-261] 1.9E-33 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RRP7A_HUMAN | 36.822 % | 169 | 1.1E-51 |
| RRP7B_HUMAN | 46.154 % | 90.5 | 3.12E-23 |