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TRANSCRIPT CARD

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  1. Clone 'man30g12' > 
  2. Clone 'cicl026g03' > 
  3. Clone 'AHC0AAA151YC07' > 
  4. Transcript 'KH2012:KH.C13.179.v1...'

Transcript Model

Transcript Id

KH2012:KH.C13.179.v1.A.nonSL3-1

Possible name(s)

RRP7A

Gene model

KH2012:KH.C13.179

Location

KhC13 [1,492,505 / 1,496,866]

Sequences

Amino acid sequence

Length: 260

>KH.C13.179.v1.A.nonSL3-1
KMENQDNKVYQIKIKAQASCSSCHTLFITNKSKPNVHVLLVSSIPPYCNQHTLHRLFGKC
GKILEVRLQKHANKPINDDQTTDNFPPPPILGFKVAFITFQSNKGINEFIKKTKSTEPWL
ISNESTKLITGLKKWCLDYIYEQPDPKKLKLEVDEYMTKYDAKVKQEQEEEIENDGIPDD
EGWVKVSSRGRNAGVSRTETNQKKSKRKEKKKRKQNEMFSIYKYQVRESKRQKIAELREK
FEEDKLRIQAMKEARKFRPF

Nucleotide sequence

Length: 1,299

>KH2012:KH.C13.179.v1.A.nonSL3-1
AAAAATGGAAAATCAAGACAATAAAGTTTACCAGATTAAAATAAAAGCCCAAGCCTCATG
TTCCAGTTGTCACACGTTGTTTATTACTAACAAATCAAAGCCGAACGTACACGTTTTACT
TGTGTCCAGCATTCCCCCATATTGTAACCAGCACACGTTACATCGCTTGTTCGGAAAATG
CGGCAAAATTCTTGAAGTTCGACTTCAAAAACACGCAAACAAACCAATAAACGATGATCA
AACGACTGACAACTTCCCTCCACCACCAATACTGGGGTTTAAAGTAGCTTTCATAACCTT
TCAGTCGAACAAGGGAATCAATGAATTCATAAAGAAAACAAAATCAACAGAACCTTGGTT
GATTTCAAATGAATCGACCAAACTTATAACTGGATTAAAAAAATGGTGTTTGGATTACAT
TTATGAACAACCAGATCCTAAGAAACTTAAACTAGAAGTGGATGAATATATGACCAAGTA
TGATGCCAAAGTTAAACAGGAGCAAGAGGAAGAAATTGAAAACGATGGAATTCCGGACGA
TGAAGGTTGGGTTAAAGTGTCCAGTAGAGGGCGAAATGCGGGAGTGAGTAGAACGGAAAC
GAATCAAAAAAAGTCCAAGAGAAAAGAAAAGAAAAAGCGAAAACAAAACGAAATGTTTAG
TATTTATAAATACCAGGTCCGGGAATCAAAAAGACAAAAAATCGCGGAACTTCGTGAAAA
GTTTGAAGAAGACAAGTTGAGAATACAGGCCATGAAAGAAGCCAGAAAGTTCCGGCCGTT
TTAACAATTACTGCCTGTTAAGTTTCTTTTGTCGGCCAAGTCTCATGGCTTTTTGGGCCG
TGGCTCTGACGGTATTTATTTCAACTGTAAGGTTGTCTTTGCAATTCTACAGTTTGTAAA
TATGACGCTTACAGTTGAAACAGGAGTATAAAGACAGGAACATGTTATAACATAATATTC
CATTTATTACTTGGGGCCGATACATTTAGTACTTGGTACAGGTTTTGCCAAGATAGTTTG
TGTTTTAGATCGCTCCGATATCGAACAAATTATGACAACACAGATTATGAATAGTTATAA
TTGTTTCTTTTCTGGGATTCTAAACCTGAGTTTTTGGAAATATAAGTTGATTTACAATCT
GGATTTAAAGTTTTCTAAACTTAAGGAACACTGATGTAAGTTAAACTGTAAAAACAGGAG
TCTGGTAGATTATGTTTGTTCGTATTTTGTTTCATCAATATAAAACACATTCGTCTAAAT
TTTAATTCATGTTCATGTACATTAAAATCTCAAAGAAGT

InterProScan

Gene3D
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[5-119] 1.4E-7
PANTHER
RRP7 (IPR024326) - T[6-260] 1.3E-55
SUPERFAMILY
RBD_domain_sf (IPR035979) - T[32-108] 2.96E-8
CDD
Rrp7A_RRM (IPR034890) - T[37-139] 6.37169E-44
Pfam
RRM_dom (IPR000504) - T[39-71] 2.1E-4
Pfam
RRP7 (IPR024326) - T[131-260] 1.9E-33

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RRP7A_HUMAN 36.822 % 169 1.08E-51
RRP7B_HUMAN 46.154 % 90.5 2.8E-23