- Transcript 'KH2012:KH.C13.179.v1...'
Transcript Model
Transcript Id
KH2012:KH.C13.179.v1.A.nonSL3-1
Possible name(s)
RRP7A
Gene model
Location
KhC13 [1,492,505 / 1,496,866]
Amino acid sequence
Length: 260
>KH.C13.179.v1.A.nonSL3-1
KMENQDNKVYQIKIKAQASCSSCHTLFITNKSKPNVHVLLVSSIPPYCNQHTLHRLFGKC
GKILEVRLQKHANKPINDDQTTDNFPPPPILGFKVAFITFQSNKGINEFIKKTKSTEPWL
ISNESTKLITGLKKWCLDYIYEQPDPKKLKLEVDEYMTKYDAKVKQEQEEEIENDGIPDD
EGWVKVSSRGRNAGVSRTETNQKKSKRKEKKKRKQNEMFSIYKYQVRESKRQKIAELREK
FEEDKLRIQAMKEARKFRPF
Nucleotide sequence
Length: 1,299
>KH2012:KH.C13.179.v1.A.nonSL3-1
AAAAATGGAAAATCAAGACAATAAAGTTTACCAGATTAAAATAAAAGCCCAAGCCTCATG
TTCCAGTTGTCACACGTTGTTTATTACTAACAAATCAAAGCCGAACGTACACGTTTTACT
TGTGTCCAGCATTCCCCCATATTGTAACCAGCACACGTTACATCGCTTGTTCGGAAAATG
CGGCAAAATTCTTGAAGTTCGACTTCAAAAACACGCAAACAAACCAATAAACGATGATCA
AACGACTGACAACTTCCCTCCACCACCAATACTGGGGTTTAAAGTAGCTTTCATAACCTT
TCAGTCGAACAAGGGAATCAATGAATTCATAAAGAAAACAAAATCAACAGAACCTTGGTT
GATTTCAAATGAATCGACCAAACTTATAACTGGATTAAAAAAATGGTGTTTGGATTACAT
TTATGAACAACCAGATCCTAAGAAACTTAAACTAGAAGTGGATGAATATATGACCAAGTA
TGATGCCAAAGTTAAACAGGAGCAAGAGGAAGAAATTGAAAACGATGGAATTCCGGACGA
TGAAGGTTGGGTTAAAGTGTCCAGTAGAGGGCGAAATGCGGGAGTGAGTAGAACGGAAAC
GAATCAAAAAAAGTCCAAGAGAAAAGAAAAGAAAAAGCGAAAACAAAACGAAATGTTTAG
TATTTATAAATACCAGGTCCGGGAATCAAAAAGACAAAAAATCGCGGAACTTCGTGAAAA
GTTTGAAGAAGACAAGTTGAGAATACAGGCCATGAAAGAAGCCAGAAAGTTCCGGCCGTT
TTAACAATTACTGCCTGTTAAGTTTCTTTTGTCGGCCAAGTCTCATGGCTTTTTGGGCCG
TGGCTCTGACGGTATTTATTTCAACTGTAAGGTTGTCTTTGCAATTCTACAGTTTGTAAA
TATGACGCTTACAGTTGAAACAGGAGTATAAAGACAGGAACATGTTATAACATAATATTC
CATTTATTACTTGGGGCCGATACATTTAGTACTTGGTACAGGTTTTGCCAAGATAGTTTG
TGTTTTAGATCGCTCCGATATCGAACAAATTATGACAACACAGATTATGAATAGTTATAA
TTGTTTCTTTTCTGGGATTCTAAACCTGAGTTTTTGGAAATATAAGTTGATTTACAATCT
GGATTTAAAGTTTTCTAAACTTAAGGAACACTGATGTAAGTTAAACTGTAAAAACAGGAG
TCTGGTAGATTATGTTTGTTCGTATTTTGTTTCATCAATATAAAACACATTCGTCTAAAT
TTTAATTCATGTTCATGTACATTAAAATCTCAAAGAAGT
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[5-119] 1.4E-7 |
| PANTHER |
RRP7 (IPR024326) - T[6-260] 1.3E-55 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[32-108] 2.96E-8 |
| CDD |
Rrp7A_RRM (IPR034890) - T[37-139] 6.37169E-44 |
| Pfam |
RRM_dom (IPR000504) - T[39-71] 2.1E-4 |
| Pfam |
RRP7 (IPR024326) - T[131-260] 1.9E-33 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RRP7A_HUMAN | 36.822 % | 169 | 1.08E-51 |
| RRP7B_HUMAN | 46.154 % | 90.5 | 2.8E-23 |