- Transcript 'KH2012:KH.C13.179.v1...'
Transcript Model
Transcript Id
KH2012:KH.C13.179.v1.A.nonSL2-1
Possible name(s)
RRP7A
Gene model
Location
KhC13 [1,492,451 / 1,496,866]
Amino acid sequence
Length: 264
>KH.C13.179.v1.A.nonSL2-1
QNSTKMENQDNKVYQIKIKAQASCSSCHTLFITNKSKPNVHVLLVSSIPPYCNQHTLHRL
FGKCGKILEVRLQKHANKPINDDQTTDNFPPPPILGFKVAFITFQSNKGINEFIKKTKST
EPWLISNESTKLITGLKKWCLDYIYEQPDPKKLKLEVDEYMTKYDAKVKQEQEEEIENDG
IPDDEGWVKVSSRGRNAGVSRTETNQKKSKRKEKKKRKQNEMFSIYKYQVRESKRQKIAE
LREKFEEDKLRIQAMKEARKFRPF
Nucleotide sequence
Length: 1,353
>KH2012:KH.C13.179.v1.A.nonSL2-1
AAAAAGCGACAACCCTTGTTGTAACACGCACATGGGATTTTGACAGAATTCAACAAAAAT
GGAAAATCAAGACAATAAAGTTTACCAGATTAAAATAAAAGCCCAAGCCTCATGTTCCAG
TTGTCACACGTTGTTTATTACTAACAAATCAAAGCCGAACGTACACGTTTTACTTGTGTC
CAGCATTCCCCCATATTGTAACCAGCACACGTTACATCGCTTGTTCGGAAAATGCGGCAA
AATTCTTGAAGTTCGACTTCAAAAACACGCAAACAAACCAATAAACGATGATCAAACGAC
TGACAACTTCCCTCCACCACCAATACTGGGGTTTAAAGTAGCTTTCATAACCTTTCAGTC
GAACAAGGGAATCAATGAATTCATAAAGAAAACAAAATCAACAGAACCTTGGTTGATTTC
AAATGAATCGACCAAACTTATAACTGGATTAAAAAAATGGTGTTTGGATTACATTTATGA
ACAACCAGATCCTAAGAAACTTAAACTAGAAGTGGATGAATATATGACCAAGTATGATGC
CAAAGTTAAACAGGAGCAAGAGGAAGAAATTGAAAACGATGGAATTCCGGACGATGAAGG
TTGGGTTAAAGTGTCCAGTAGAGGGCGAAATGCGGGAGTGAGTAGAACGGAAACGAATCA
AAAAAAGTCCAAGAGAAAAGAAAAGAAAAAGCGAAAACAAAACGAAATGTTTAGTATTTA
TAAATACCAGGTCCGGGAATCAAAAAGACAAAAAATCGCGGAACTTCGTGAAAAGTTTGA
AGAAGACAAGTTGAGAATACAGGCCATGAAAGAAGCCAGAAAGTTCCGGCCGTTTTAACA
ATTACTGCCTGTTAAGTTTCTTTTGTCGGCCAAGTCTCATGGCTTTTTGGGCCGTGGCTC
TGACGGTATTTATTTCAACTGTAAGGTTGTCTTTGCAATTCTACAGTTTGTAAATATGAC
GCTTACAGTTGAAACAGGAGTATAAAGACAGGAACATGTTATAACATAATATTCCATTTA
TTACTTGGGGCCGATACATTTAGTACTTGGTACAGGTTTTGCCAAGATAGTTTGTGTTTT
AGATCGCTCCGATATCGAACAAATTATGACAACACAGATTATGAATAGTTATAATTGTTT
CTTTTCTGGGATTCTAAACCTGAGTTTTTGGAAATATAAGTTGATTTACAATCTGGATTT
AAAGTTTTCTAAACTTAAGGAACACTGATGTAAGTTAAACTGTAAAAACAGGAGTCTGGT
AGATTATGTTTGTTCGTATTTTGTTTCATCAATATAAAACACATTCGTCTAAATTTTAAT
TCATGTTCATGTACATTAAAATCTCAAAGAAGT
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[6-122] 1.5E-7 |
| PANTHER |
RRP7 (IPR024326) - T[7-264] 1.3E-55 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[36-112] 2.96E-8 |
| CDD |
Rrp7A_RRM (IPR034890) - T[41-143] 5.96775E-44 |
| Pfam |
RRM_dom (IPR000504) - T[43-75] 2.2E-4 |
| Pfam |
RRP7 (IPR024326) - T[135-264] 2.0E-33 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RRP7A_HUMAN | 36.822 % | 169 | 1.26E-51 |
| RRP7B_HUMAN | 46.154 % | 90.9 | 2.92E-23 |