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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C5.581.v1....'
  2. Transcript 'KH2012:KH.C13.173.v3...'

Transcript Model

Transcript Id

KH2012:KH.C13.173.v3.B.SL3-2

Possible name(s)

STX10; STX6

Location

KhC13 [577,503 / 585,101]

Sequences

Amino acid sequence

Length: 242

>KH.C13.173.v3.B.SL3-2
SFQGNCDKSAKMSVEDPFFVVKSEVEKSINNCRELHSRWRDMLNETKSMKRGDYDKVSND
LRNGLRSIEWDLEDLDETIGIVECNPAKFRIDGSELSARRDFISATRNRIVEMKNELNDP
QAKAKADKLLRNNLLQNGLNHKKDKDRYSRLHIANENENNAFIDDHQQKQQXXXXXSIGN
ELDEQSVMLDGLGHEMETTQNRMDTLLRKMAKVTKMSSDRRQWCAICVLGSCIFILFLCI
VI

Nucleotide sequence

Length: 1,241

>KH2012:KH.C13.173.v3.B.SL3-2
AGTCGTTTCAAGGAAACTGTGATAAAAGTGCCAAAATGTCAGTAGAAGATCCATTTTTTG
TTGTGAAAAGCGAGGTAGAAAAATCCATAAACAATTGTCGGGAATTGCACTCCCGGTGGC
GAGACATGCTAAACGAGACGAAATCAATGAAGCGTGGAGACTACGATAAAGTTAGCAACG
ATTTACGAAACGGGCTCCGAAGCATTGAGTGGGATTTAGAAGATTTAGACGAAACAATTG
GCATCGTCGAATGCAACCCCGCCAAGTTCCGAATAGACGGATCTGAGTTGTCTGCTCGAC
GAGATTTTATCTCAGCCACCAGAAACCGAATCGTGGAAATGAAAAACGAACTAAATGACC
CCCAGGCTAAAGCAAAAGCTGATAAACTCTTAAGAAATAACCTTCTTCAAAATGGTTTAA
ACCATAAAAAAGACAAAGACAGATATTCTAGACTCCATATTGCCAACGAAAACGAAAACA
ATGCATTTATAGATGACCACCAGCAAAAACAACAGNNNNNNNNNNNNNNATCAATTGGTA
ATGAATTAGATGAACAATCTGTTATGTTGGACGGTCTTGGGCATGAAATGGAAACAACGC
AAAACAGAATGGATACTTTACTCCGAAAAATGGCAAAAGTCACAAAAATGTCAAGTGACC
GCAGGCAATGGTGCGCTATTTGCGTTTTGGGCTCGTGCATTTTTATACTATTTCTATGTA
TTGTCATCTGAAACTACTTCGTTGCCACTCAATATCACGCCTCATGCGCGCCGAGCGAAT
TCTGCCGTCGTGCAATGCTTAACAGCTCTCCTAGTGTTGGAACTATATGATTTCTACTGT
TCCCGCATTCCGCAACTCATTGCTGCCCTCTTGTGCGTAATTTGACGTAAGTTTTTATCG
TGATTTTTGAACTTTTTTTTCATTTCATGCTTGCACCTTTTTTCTTGTACATTTTGAACA
AATGAAATGTTCGTTTTTAAAAAAGGTCAAAAAACTTACATTTTTTGTTACATTGGCAGC
GTAAAATGTGGAAAATTTTACCCCAAATTGGGATATTGTATGAAAGATATTTTGTTTTTA
ATTTCAAATGAAATTTTCAGACACTGCAATTTGCGGTTTAGTGTTTTTTTGTTTTGTGTT
TTTATTCTCTTATGTGATGATGCGAATGTCATGTTCTTTTTGTAAGGTGCTATCAAAATA
GCTGTGTTCAAATAAATCTTACAACAATGAAAAAGGAAAAA

InterProScan

SUPERFAMILY
SNARE (IPR010989) - T[15-119] 2.75E-31
Pfam
Syntaxin-6_N (IPR015260) - T[16-114] 4.8E-33
ProSiteProfiles
T_SNARE_dom (IPR000727) - T[177-213] 9.129
Pfam
T_SNARE_dom (IPR000727) - T[188-238] 6.0E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
STX6_HUMAN 42.678 % 199 4.71E-64
STX10_HUMAN 43.348 % 194 8.56E-62