Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C13.173.v3.B.ND2-2

Possible name(s)

STX10; STX6

Gene model

KH2012:KH.C13.173

Location

KhC13 [577,503 / 585,210]

Sequences

Amino acid sequence

Length: 243

>KH.C13.173.v3.B.ND2-2
ESFQGNCDKSAKMSVEDPFFVVKSEVEKSINNCRELHSRWRDMLNETKSMKRGDYDKVSN
DLRNGLRSIEWDLEDLDETIGIVECNPAKFRIDGSELSARRDFISATRNRIVEMKNELND
PQAKAKADKLLRNNLLQNGLNHKKDKDRYSRLHIANENENNAFIDDHQQKQQXXXXXSIG
NELDEQSVMLDGLGHEMETTQNRMDTLLRKMAKVTKMSSDRRQWCAICVLGSCIFILFLC
IVI

Nucleotide sequence

Length: 1,350

>KH2012:KH.C13.173.v3.B.ND2-2
AGATTTTTAGCCATGTGTTTACTAGGTTTTATTTATTATTGAGTTTTATCGAGAAAAAAA
CATAGAGTGTAACTGCAAGCTGTGACAATTTCTTCTGTGTTGCCATAAGAGTCGTTTCAA
GGAAACTGTGATAAAAGTGCCAAAATGTCAGTAGAAGATCCATTTTTTGTTGTGAAAAGC
GAGGTAGAAAAATCCATAAACAATTGTCGGGAATTGCACTCCCGGTGGCGAGACATGCTA
AACGAGACGAAATCAATGAAGCGTGGAGACTACGATAAAGTTAGCAACGATTTACGAAAC
GGGCTCCGAAGCATTGAGTGGGATTTAGAAGATTTAGACGAAACAATTGGCATCGTCGAA
TGCAACCCCGCCAAGTTCCGAATAGACGGATCTGAGTTGTCTGCTCGACGAGATTTTATC
TCAGCCACCAGAAACCGAATCGTGGAAATGAAAAACGAACTAAATGACCCCCAGGCTAAA
GCAAAAGCTGATAAACTCTTAAGAAATAACCTTCTTCAAAATGGTTTAAACCATAAAAAA
GACAAAGACAGATATTCTAGACTCCATATTGCCAACGAAAACGAAAACAATGCATTTATA
GATGACCACCAGCAAAAACAACAGNNNNNNNNNNNNNNATCAATTGGTAATGAATTAGAT
GAACAATCTGTTATGTTGGACGGTCTTGGGCATGAAATGGAAACAACGCAAAACAGAATG
GATACTTTACTCCGAAAAATGGCAAAAGTCACAAAAATGTCAAGTGACCGCAGGCAATGG
TGCGCTATTTGCGTTTTGGGCTCGTGCATTTTTATACTATTTCTATGTATTGTCATCTGA
AACTACTTCGTTGCCACTCAATATCACGCCTCATGCGCGCCGAGCGAATTCTGCCGTCGT
GCAATGCTTAACAGCTCTCCTAGTGTTGGAACTATATGATTTCTACTGTTCCCGCATTCC
GCAACTCATTGCTGCCCTCTTGTGCGTAATTTGACGTAAGTTTTTATCGTGATTTTTGAA
CTTTTTTTTCATTTCATGCTTGCACCTTTTTTCTTGTACATTTTGAACAAATGAAATGTT
CGTTTTTAAAAAAGGTCAAAAAACTTACATTTTTTGTTACATTGGCAGCGTAAAATGTGG
AAAATTTTACCCCAAATTGGGATATTGTATGAAAGATATTTTGTTTTTAATTTCAAATGA
AATTTTCAGACACTGCAATTTGCGGTTTAGTGTTTTTTTGTTTTGTGTTTTTATTCTCTT
ATGTGATGATGCGAATGTCATGTTCTTTTTGTAAGGTGCTATCAAAATAGCTGTGTTCAA
ATAAATCTTACAACAATGAAAAAGGAAAAA

InterProScan

SUPERFAMILY	SNARE (IPR010989) - T[16-120] 2.75E-31
Pfam	Syntaxin-6_N (IPR015260) - T[17-115] 4.9E-33
ProSiteProfiles	T_SNARE_dom (IPR000727) - T[178-214] 9.129
Pfam	T_SNARE_dom (IPR000727) - T[189-239] 6.0E-8

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
STX6_HUMAN	42.678 %	200	4.19E-64
STX10_HUMAN	43.348 %	193	1.1E-61