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TRANSCRIPT CARD

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  1. EST 'FK176484.1' > 
  2. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  3. Transcript 'KH2012:KH.C13.173.v3...'

Transcript Model

Transcript Id

KH2012:KH.C13.173.v3.B.ND2-2

Possible name(s)

STX10; STX6

Gene model

KH2012:KH.C13.173

Location

KhC13 [577,503 / 585,210]

Sequences

Amino acid sequence

Length: 243

>KH.C13.173.v3.B.ND2-2
ESFQGNCDKSAKMSVEDPFFVVKSEVEKSINNCRELHSRWRDMLNETKSMKRGDYDKVSN
DLRNGLRSIEWDLEDLDETIGIVECNPAKFRIDGSELSARRDFISATRNRIVEMKNELND
PQAKAKADKLLRNNLLQNGLNHKKDKDRYSRLHIANENENNAFIDDHQQKQQXXXXXSIG
NELDEQSVMLDGLGHEMETTQNRMDTLLRKMAKVTKMSSDRRQWCAICVLGSCIFILFLC
IVI

Nucleotide sequence

Length: 1,350

>KH2012:KH.C13.173.v3.B.ND2-2
AGATTTTTAGCCATGTGTTTACTAGGTTTTATTTATTATTGAGTTTTATCGAGAAAAAAA
CATAGAGTGTAACTGCAAGCTGTGACAATTTCTTCTGTGTTGCCATAAGAGTCGTTTCAA
GGAAACTGTGATAAAAGTGCCAAAATGTCAGTAGAAGATCCATTTTTTGTTGTGAAAAGC
GAGGTAGAAAAATCCATAAACAATTGTCGGGAATTGCACTCCCGGTGGCGAGACATGCTA
AACGAGACGAAATCAATGAAGCGTGGAGACTACGATAAAGTTAGCAACGATTTACGAAAC
GGGCTCCGAAGCATTGAGTGGGATTTAGAAGATTTAGACGAAACAATTGGCATCGTCGAA
TGCAACCCCGCCAAGTTCCGAATAGACGGATCTGAGTTGTCTGCTCGACGAGATTTTATC
TCAGCCACCAGAAACCGAATCGTGGAAATGAAAAACGAACTAAATGACCCCCAGGCTAAA
GCAAAAGCTGATAAACTCTTAAGAAATAACCTTCTTCAAAATGGTTTAAACCATAAAAAA
GACAAAGACAGATATTCTAGACTCCATATTGCCAACGAAAACGAAAACAATGCATTTATA
GATGACCACCAGCAAAAACAACAGNNNNNNNNNNNNNNATCAATTGGTAATGAATTAGAT
GAACAATCTGTTATGTTGGACGGTCTTGGGCATGAAATGGAAACAACGCAAAACAGAATG
GATACTTTACTCCGAAAAATGGCAAAAGTCACAAAAATGTCAAGTGACCGCAGGCAATGG
TGCGCTATTTGCGTTTTGGGCTCGTGCATTTTTATACTATTTCTATGTATTGTCATCTGA
AACTACTTCGTTGCCACTCAATATCACGCCTCATGCGCGCCGAGCGAATTCTGCCGTCGT
GCAATGCTTAACAGCTCTCCTAGTGTTGGAACTATATGATTTCTACTGTTCCCGCATTCC
GCAACTCATTGCTGCCCTCTTGTGCGTAATTTGACGTAAGTTTTTATCGTGATTTTTGAA
CTTTTTTTTCATTTCATGCTTGCACCTTTTTTCTTGTACATTTTGAACAAATGAAATGTT
CGTTTTTAAAAAAGGTCAAAAAACTTACATTTTTTGTTACATTGGCAGCGTAAAATGTGG
AAAATTTTACCCCAAATTGGGATATTGTATGAAAGATATTTTGTTTTTAATTTCAAATGA
AATTTTCAGACACTGCAATTTGCGGTTTAGTGTTTTTTTGTTTTGTGTTTTTATTCTCTT
ATGTGATGATGCGAATGTCATGTTCTTTTTGTAAGGTGCTATCAAAATAGCTGTGTTCAA
ATAAATCTTACAACAATGAAAAAGGAAAAA

InterProScan

SUPERFAMILY
SNARE (IPR010989) - T[16-120] 2.75E-31
Pfam
Syntaxin-6_N (IPR015260) - T[17-115] 4.9E-33
ProSiteProfiles
T_SNARE_dom (IPR000727) - T[178-214] 9.129
Pfam
T_SNARE_dom (IPR000727) - T[189-239] 6.0E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
STX6_HUMAN 42.678 % 200 4.19E-64
STX10_HUMAN 43.348 % 193 1.1E-61