Aniseed - Transcript Card

>
Transcript 'KH2012:KH.C13.173.v2...'

Sorry, you are not authorised to access this data

Transcript Model

Transcript Id

KH2012:KH.C13.173.v2.B.SL1-1

Possible name(s)

STX10; STX6

Gene model

KH2012:KH.C13.173

Location

KhC13 [577,515 / 585,208]

Sequences

Amino acid sequence

Length: 188

>KH.C13.173.v2.B.SL1-1
PPPKFNRLSKTIHPYQYIDPLTPSSRIVECNPAKFRIDGSELSARRDFISATRNRIVEMK
NELNDPQAKAKADKLLRNNLLQNGLNHKKDKDRYSRLHIANENENNAFIDDHQQKQQXXX
XXSIGNELDEQSVMLDGLGHEMETTQNRMDTLLRKMAKVTKMSSDRRQWCAICVLGSCIF
ILFLCIVI

Nucleotide sequence

Length: 1,868

>KH2012:KH.C13.173.v2.B.SL1-1
ATTTTTAGCCATGTGTTTACTAGGTTTTATTTATTATTGAGTTTTATCGAGAAAAAAACA
TAGAGTGTAACTGCAAGCTGTGACAATTTCTTCTGTGTTGCCATAAGAGTCGTTTCAAGG
AAACTGTGATAAAAGTGCCAAAATGTCAGTAGAAGATCCATTTTTTGTTGTGAAAAGCGA
GGTAGAAAAATCCATAAACAATTGTCGGGAATTGCACTCCCGGTGGCGAGACATGCTAAA
CGAGACGAAATCAATGAAGCGTGGAGACTACGATAAAGTTAGCAACGATTTACGAAACGG
GCTCCGAAGCATTGAGTGGGATTTAGAAGATTTAGACGAAACAATTGATATCCTTTAAAT
ATTTATTATAATTTTAAACTTAAGCTATTTATTTGTACTAGTTTTTATGTATTTGTACTA
GTACTAGTTGTATTTGTACTGTACTAGTTTTTATGTATTTGTACTAGTTTTTTAGTATTT
GTACTAGTTTTTATGTTATTGCTTGGGTAATGGGCCAACTCTGGACAAAATTTATTATAG
TTTTAACTAGTTATGGTGTAATATTACCAGTTTTAATGCAGTGTTGGACCAACTCTGGCC
TAAAAATGTCATGTTTTATGATCTCATCCATATAAAACTAGTACTTATTCTTTTATTTAT
TTAATGGCATGCCTTTAGAACAATGGATACAGGTTCAAATCTTGGTGTTGCTACCATTGT
GGGCGTATATGTCCTTGGGGAAGACACTTAATTACACCCCTTATGATGTCTCATTTTAAC
GGCAATGCTACATAACCCATTAACCGCCCCCAAAATTTAACCGACTTTCAAAAACCATTC
ATCCGTATCAATATATTGACCCCTTAACCCCATCTTCACGCATCGTCGAATGCAACCCCG
CCAAGTTCCGAATAGACGGATCTGAGTTGTCTGCTCGACGAGATTTTATCTCAGCCACCA
GAAACCGAATCGTGGAAATGAAAAACGAACTAAATGACCCCCAGGCTAAAGCAAAAGCTG
ATAAACTCTTAAGAAATAACCTTCTTCAAAATGGTTTAAACCATAAAAAAGACAAAGACA
GATATTCTAGACTCCATATTGCCAACGAAAACGAAAACAATGCATTTATAGATGACCACC
AGCAAAAACAACAGNNNNNNNNNNNNNNATCAATTGGTAATGAATTAGATGAACAATCTG
TTATGTTGGACGGTCTTGGGCATGAAATGGAAACAACGCAAAACAGAATGGATACTTTAC
TCCGAAAAATGGCAAAAGTCACAAAAATGTCAAGTGACCGCAGGCAATGGTGCGCTATTT
GCGTTTTGGGCTCGTGCATTTTTATACTATTTCTATGTATTGTCATCTGAAACTACTTCG
TTGCCACTCAATATCACGCCTCATGCGCGCCGAGCGAATTCTGCCGTCGTGCAATGCTTA
ACAGCTCTCCTAGTGTTGGAACTATATGATTTCTACTGTTCCCGCATTCCGCAACTCATT
GCTGCCCTCTTGTGCGTAATTTGACGTAAGTTTTTATCGTGATTTTTGAACTTTTTTTTC
ATTTCATGCTTGCACCTTTTTTCTTGTACATTTTGAACAAATGAAATGTTCGTTTTTAAA
AAAGGTCAAAAAACTTACATTTTTTGTTACATTGGCAGCGTAAAATGTGGAAAATTTTAC
CCCAAATTGGGATATTGTATGAAAGATATTTTGTTTTTAATTTCAAATGAAATTTTCAGA
CACTGCAATTTGCGGTTTAGTGTTTTTTTGTTTTGTGTTTTTATTCTCTTATGTGATGAT
GCGAATGTCATGTTCTTTTTGTAAGGTGCTATCAAAATAGCTGTGTTCAAATAAATCTTA
CAACAATG

InterProScan

SUPERFAMILY	SNARE (IPR010989) - T[18-65] 3.14E-8
Pfam	Syntaxin-6_N (IPR015260) - T[20-60] 3.1E-7
ProSiteProfiles	T_SNARE_dom (IPR000727) - T[123-159] 9.129
Pfam	T_SNARE_dom (IPR000727) - T[134-184] 4.2E-8

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
STX6_HUMAN	34.375 %	117	9.51E-33
STX10_HUMAN	33.871 %	101	1.55E-26