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  1. Transcript 'KH2012:KH.C13.173.v2...'

Transcript Model

Transcript Id

KH2012:KH.C13.173.v2.B.SL1-1

Possible name(s)

STX10; STX6

Gene model

KH2012:KH.C13.173

Location

KhC13 [577,515 / 585,208]

Sequences

Amino acid sequence

Length: 188

>KH.C13.173.v2.B.SL1-1
PPPKFNRLSKTIHPYQYIDPLTPSSRIVECNPAKFRIDGSELSARRDFISATRNRIVEMK
NELNDPQAKAKADKLLRNNLLQNGLNHKKDKDRYSRLHIANENENNAFIDDHQQKQQXXX
XXSIGNELDEQSVMLDGLGHEMETTQNRMDTLLRKMAKVTKMSSDRRQWCAICVLGSCIF
ILFLCIVI

Nucleotide sequence

Length: 1,868

>KH2012:KH.C13.173.v2.B.SL1-1
ATTTTTAGCCATGTGTTTACTAGGTTTTATTTATTATTGAGTTTTATCGAGAAAAAAACA
TAGAGTGTAACTGCAAGCTGTGACAATTTCTTCTGTGTTGCCATAAGAGTCGTTTCAAGG
AAACTGTGATAAAAGTGCCAAAATGTCAGTAGAAGATCCATTTTTTGTTGTGAAAAGCGA
GGTAGAAAAATCCATAAACAATTGTCGGGAATTGCACTCCCGGTGGCGAGACATGCTAAA
CGAGACGAAATCAATGAAGCGTGGAGACTACGATAAAGTTAGCAACGATTTACGAAACGG
GCTCCGAAGCATTGAGTGGGATTTAGAAGATTTAGACGAAACAATTGATATCCTTTAAAT
ATTTATTATAATTTTAAACTTAAGCTATTTATTTGTACTAGTTTTTATGTATTTGTACTA
GTACTAGTTGTATTTGTACTGTACTAGTTTTTATGTATTTGTACTAGTTTTTTAGTATTT
GTACTAGTTTTTATGTTATTGCTTGGGTAATGGGCCAACTCTGGACAAAATTTATTATAG
TTTTAACTAGTTATGGTGTAATATTACCAGTTTTAATGCAGTGTTGGACCAACTCTGGCC
TAAAAATGTCATGTTTTATGATCTCATCCATATAAAACTAGTACTTATTCTTTTATTTAT
TTAATGGCATGCCTTTAGAACAATGGATACAGGTTCAAATCTTGGTGTTGCTACCATTGT
GGGCGTATATGTCCTTGGGGAAGACACTTAATTACACCCCTTATGATGTCTCATTTTAAC
GGCAATGCTACATAACCCATTAACCGCCCCCAAAATTTAACCGACTTTCAAAAACCATTC
ATCCGTATCAATATATTGACCCCTTAACCCCATCTTCACGCATCGTCGAATGCAACCCCG
CCAAGTTCCGAATAGACGGATCTGAGTTGTCTGCTCGACGAGATTTTATCTCAGCCACCA
GAAACCGAATCGTGGAAATGAAAAACGAACTAAATGACCCCCAGGCTAAAGCAAAAGCTG
ATAAACTCTTAAGAAATAACCTTCTTCAAAATGGTTTAAACCATAAAAAAGACAAAGACA
GATATTCTAGACTCCATATTGCCAACGAAAACGAAAACAATGCATTTATAGATGACCACC
AGCAAAAACAACAGNNNNNNNNNNNNNNATCAATTGGTAATGAATTAGATGAACAATCTG
TTATGTTGGACGGTCTTGGGCATGAAATGGAAACAACGCAAAACAGAATGGATACTTTAC
TCCGAAAAATGGCAAAAGTCACAAAAATGTCAAGTGACCGCAGGCAATGGTGCGCTATTT
GCGTTTTGGGCTCGTGCATTTTTATACTATTTCTATGTATTGTCATCTGAAACTACTTCG
TTGCCACTCAATATCACGCCTCATGCGCGCCGAGCGAATTCTGCCGTCGTGCAATGCTTA
ACAGCTCTCCTAGTGTTGGAACTATATGATTTCTACTGTTCCCGCATTCCGCAACTCATT
GCTGCCCTCTTGTGCGTAATTTGACGTAAGTTTTTATCGTGATTTTTGAACTTTTTTTTC
ATTTCATGCTTGCACCTTTTTTCTTGTACATTTTGAACAAATGAAATGTTCGTTTTTAAA
AAAGGTCAAAAAACTTACATTTTTTGTTACATTGGCAGCGTAAAATGTGGAAAATTTTAC
CCCAAATTGGGATATTGTATGAAAGATATTTTGTTTTTAATTTCAAATGAAATTTTCAGA
CACTGCAATTTGCGGTTTAGTGTTTTTTTGTTTTGTGTTTTTATTCTCTTATGTGATGAT
GCGAATGTCATGTTCTTTTTGTAAGGTGCTATCAAAATAGCTGTGTTCAAATAAATCTTA
CAACAATG

InterProScan

SUPERFAMILY
SNARE (IPR010989) - T[18-65] 3.14E-8
Pfam
Syntaxin-6_N (IPR015260) - T[20-60] 3.1E-7
ProSiteProfiles
T_SNARE_dom (IPR000727) - T[123-159] 9.129
Pfam
T_SNARE_dom (IPR000727) - T[134-184] 4.2E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
STX6_HUMAN 34.375 % 117 9.51E-33
STX10_HUMAN 33.871 % 101 1.55E-26