- Transcript 'KH2012:KH.C13.171.v1...'
Transcript Model
Transcript Id
KH2012:KH.C13.171.v1.A.ND1-1
Possible name(s)
CYP11A1; CYP24A1; CYP27A1
Gene model
Location
KhC13 [661,813 / 668,591]
Amino acid sequence
Length: 507
>KH.C13.171.v1.A.ND1-1
MKAIARFPFPALVRFVSTCPAHQRAAWSKKASQEDLSYAKPFEAVPEPNSYPVIGTALEY
TPLNNFNPSYVGEHWIERHKELGPIYKENILPGVTETMVFTSSPQNTEIMFRNEERCPFR
DPLGPVAKIRDERNEYHGLTNSNGEDWWRVRQIVNQHFLQNTAVWKYAEAHRNVSKDFLK
FIDRNMDEKNEVPNFGKALNRWSFEGAGVFTLKRRLGALDIKPCTEIEEMINCNERIFQS
MGELLYALPFWKYVNTKDMKKLRQALQEQYNSTETHILRILKDKDISSEGSILHNQCLSD
SEKVILMTEFLVAGIDTTSNSAAFLLYALASNQEAQERLREEVREVNRMDTIDGKLLHNM
KYLQACLRETQRMFPFVNSSPRRFRKDLVLSGYLIPAGTHILNTSNTVNSRNPEYYDDPN
TFIPERWLETKSVTERQRERFIMSGPFGLGMRMCPGRKFSIQELQLLLITLLSNYRVEYH
HDPIKVAFRLVSFPSQAPQFKFTKLKN
Nucleotide sequence
Length: 2,070
>KH2012:KH.C13.171.v1.A.ND1-1
ATGAAAGCGATCGCACGATTTCCGTTTCCAGCTCTTGTGAGGTTTGTTTCGACTTGCCCC
GCCCACCAGAGAGCAGCATGGAGTAAAAAGGCGTCGCAAGAAGATTTATCATACGCCAAG
CCGTTTGAGGCTGTACCAGAACCAAACAGTTACCCAGTTATTGGTACTGCATTGGAATAT
ACGCCTTTAAACAACTTTAACCCTTCGTACGTCGGTGAACACTGGATTGAAAGGCATAAG
GAATTGGGACCGATTTATAAAGAGAACATTTTGCCAGGAGTCACTGAAACGATGGTGTTC
ACGTCTTCGCCCCAGAACACAGAAATTATGTTTCGTAACGAGGAGAGATGCCCGTTTCGT
GACCCGCTGGGTCCTGTAGCAAAAATACGAGATGAACGGAACGAGTACCACGGCTTGACT
AATTCTAATGGGGAAGATTGGTGGAGGGTCCGCCAAATCGTGAATCAACACTTTCTCCAA
AACACGGCGGTGTGGAAATACGCGGAAGCGCATAGGAATGTGTCCAAAGATTTCTTAAAG
TTTATTGACCGAAACATGGACGAAAAGAATGAGGTTCCGAATTTTGGAAAAGCATTAAAC
CGTTGGTCCTTTGAAGGAGCAGGCGTTTTTACTTTGAAAAGACGGCTGGGGGCATTAGAC
ATAAAGCCATGCACAGAAATAGAAGAAATGATAAATTGCAATGAAAGGATTTTCCAATCC
ATGGGAGAATTATTATATGCGTTACCATTCTGGAAATATGTGAATACCAAAGACATGAAG
AAACTAAGGCAAGCGTTGCAAGAGCAATACAATTCCACTGAAACACATATTCTAAGAATA
CTTAAGGATAAAGATATATCAAGTGAAGGTAGCATACTACACAACCAATGTCTTAGTGAT
AGTGAAAAGGTGATATTAATGACTGAGTTCTTAGTAGCTGGTATTGACACGACATCAAAC
AGTGCTGCATTTCTCTTATATGCTCTCGCTTCTAACCAAGAAGCGCAAGAACGACTTAGA
GAAGAAGTCAGGGAAGTTAATAGAATGGACACAATTGACGGAAAGTTATTGCACAACATG
AAGTACTTACAAGCCTGTCTACGTGAAACACAACGTATGTTTCCATTTGTTAACTCGTCT
CCAAGAAGATTTCGGAAAGATCTCGTCCTTTCAGGTTATCTTATACCGGCAGGCACCCAC
ATTCTGAACACATCAAACACAGTAAACAGCAGGAACCCTGAGTATTACGACGACCCAAAC
ACTTTTATTCCTGAACGTTGGTTGGAAACTAAATCAGTGACGGAAAGACAAAGAGAAAGG
TTTATAATGTCTGGACCTTTTGGACTTGGTATGCGAATGTGTCCTGGTCGGAAATTCTCC
ATTCAAGAATTACAACTACTTCTGATCACTCTATTATCCAACTATCGTGTTGAGTATCAT
CATGACCCCATAAAAGTCGCATTTCGTCTCGTCTCTTTCCCATCCCAAGCCCCCCAGTTC
AAGTTCACCAAGCTTAAAAACTGATCTAATATTTGTGGGGTAATGTGCTAACTCTGGCTT
AAATCCTTGAACCCATGGCGTGCCTCACTGTGGGACTTTACCCACAAAAAATAGAACTAA
CATTTTATAATAGGGAAATACCATTTCTTTAAACATGTACACATTTTTTCAGACACAAAT
TCTTGTAAAACAAATCTAAATTTTACGTTTATTGTTTACTGATTAATGCCGTGCAGAAAA
ATTGATCTTTACATATTCACCAAACTCTTTAAAACACAGGGGAGGCAGAGATAGTTAGAC
ACACATTCCTATGAAACAAATTTAGCTTATTGGTTTTAATGTTTACTGATTAATGCAATG
TAGAAGTTTCTATGGTAGGAAAATTCGCCAGTAAAATATTTCCAATATTTTTTTTGTAAA
TTTATGTTTTTGTCTGTAAATTTTATTTTTATTGAGGGGTGTACGTTAAAATATACATCG
GTAATTCAATATTATTTGCATAAATTTGATGCTTCACTGCATTGTATAAATATTGAATAA
GGTGTAACTTATTTGTAATAATGAAAAGTA
| Gene3D |
Cyt_P450_sf (IPR036396) - T[36-507] 5.7E-109 |
| SUPERFAMILY |
Cyt_P450_sf (IPR036396) - T[46-499] 4.06E-79 |
| Pfam |
Cyt_P450 (IPR001128) - T[46-496] 3.2E-72 |
| PRINTS |
Cyt_P450_E_grp-I (IPR002401) - T[302-319] 3.2E-15 - T[322-348] 3.2E-15 - T[364-382] 3.2E-15 - T[405-429] 3.2E-15 - T[444-454] 3.2E-15 - T[454-477] 3.2E-15 |
| PRINTS |
Cyt_P450 (IPR001128) - T[313-330] 1.2E-9 - T[365-376] 1.2E-9 - T[445-454] 1.2E-9 - T[454-465] 1.2E-9 |
| ProSitePatterns |
Cyt_P450_CS (IPR017972) - T[447-456] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CP24A_HUMAN | 28.205 % | 182 | 1.44E-51 |
| CP11A_HUMAN | 25.572 % | 138 | 2.18E-35 |
| CP27A_HUMAN | 28.243 % | 152 | 1.66E-40 |
