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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C1.165.v2....'
  2. Transcript 'KH2012:KH.C5.392.v1....'
  3. Transcript 'Phmamm.CG.MTP2014.S3...'
  4. Transcript 'KH2012:KH.C13.134.v1...'

Transcript Model

Transcript Id

KH2012:KH.C13.134.v1.A.SL2-1

Possible name(s)

HMCN1; SSPO; THBS1

Location

KhC13 [1,192,823 / 1,203,635]

Sequences

Amino acid sequence

Length: 1,065

>KH.C13.134.v1.A.SL2-1
LRKMFVPIRIVVLACLAMPVTCFAVSLDSWSTWSSCSVTCGSGVATRRWKCSGINCEQKV
ETKECFPEFCPSYLSWPRIHFGGTLVMDANTINNKRCNYQNEYFSNIAAKIKEKSISVVN
DKYTHYMFRINNWNPDGSGHVYFMNSTVKSICTGPSQCSTTDTIVGSVFKEITRGQLATI
DPDWQVTVEVWGLTVQIPGVLKGRLRPGSVQQEGGRVMHANKKIKGYAIGGLGRFKTKVE
NITWESSHYKSMFNNAEELSMIYVIDLFNQFSFSCRMVGTLGLTSPDDPNEITAGRMLKS
TIHAIPTPFFVNYKKKVITMDFSGSFHGKMNGHINSQGVDLAIKINCRYPLIYPPNVCPH
GHHKVGSTTVYYITRNGDLSSKYFGTNMDWYFKYGGIVDVDISHLSLRWRNLIKFHELIL
LRAGRGFETIIAKEYMKGITIGVSNQLAMRLNNGQTKKYIAYASRFNKPMPGVEMKFTNV
PMNATTDCNRPDTCKLPLSLPADVIHTSSNTSLTNYEGKMIFNISALKSPGNPRGCGLDG
QLYILMLEMSCTIGGYKYTFKNGQFGGTLLHKMVHPSEFVLTLAPLVRIYNEVEVKECPT
WQDIKGILTQYYNLYPVMSKNGIINLHNYMEVKQKSQLIRIAMFQTDFEDPKYMPASRDL
SLSKQKLIWNWMQCGMKYGNETEDKDVCHPSVVGENMKKLKLYLQKAVNLELTTIPPYFT
AWLSLQTEYARNLKVARQIKSIYTEEMLHMSIAANILNSIGGTVNLTNIEEIPIYPTKLG
SGSFFELAPGLQVTLQKFSKGLIKDIFMEIELPSPDRDRKDFKQIVGLWKRLPVQGSGGT
ISTNMDQLLQEFEGEVVDESYDDNQETLGATEKLQLQRKWERVKNHASKMLKISPYGINT
IGSLYTKITLFLTALESCAKIDGLNNIGPGTIFVGDPIKQLNMSYWYNPAMVSDLKTVSK
FWSSEMSKEELVLNERQTSFKIKRVERDSFPPGSDLVSPLFPITDLKSAIQGVVEIIYQG
EGGSPCSPFKSTKPGGTLSLQTSHYVRFMEIVHGRTLGSNEKTIG

Nucleotide sequence

Length: 4,079

>KH2012:KH.C13.134.v1.A.SL2-1
TTTGAGGAAAATGTTTGTACCGATCAGGATTGTTGTGTTGGCCTGCCTTGCAATGCCAGT
GACTTGCTTCGCAGTCTCATTGGACAGTTGGAGCACGTGGTCATCCTGCAGTGTGACGTG
TGGTTCGGGGGTTGCCACTCGCCGTTGGAAATGTTCAGGAATAAACTGCGAGCAAAAAGT
CGAAACCAAAGAATGTTTTCCAGAATTTTGCCCAAGCTACCTCTCTTGGCCAAGGATACA
CTTTGGCGGTACACTTGTAATGGACGCGAACACGATAAATAATAAAAGATGCAACTACCA
GAACGAATACTTTTCCAATATAGCGGCCAAGATTAAGGAAAAGTCAATTAGTGTTGTTAA
TGACAAATACACACATTACATGTTCCGTATTAATAACTGGAATCCTGATGGCAGTGGACA
CGTCTATTTCATGAACTCAACGGTCAAATCCATTTGTACAGGTCCATCACAATGCTCTAC
TACTGATACTATTGTTGGATCTGTGTTTAAAGAGATTACTAGAGGCCAGCTTGCCACAAT
TGATCCAGACTGGCAAGTAACTGTAGAAGTATGGGGGTTAACAGTTCAAATCCCTGGTGT
GCTAAAAGGAAGGTTGCGACCAGGATCTGTGCAGCAGGAGGGTGGCCGCGTTATGCATGC
TAACAAGAAGATCAAGGGTTATGCTATTGGTGGCCTAGGAAGGTTTAAAACAAAAGTTGA
AAATATAACATGGGAAAGTTCACATTACAAGTCTATGTTCAACAATGCTGAGGAACTATC
AATGATTTATGTCATTGATCTCTTTAATCAATTCTCATTCTCATGCAGAATGGTGGGGAC
ATTGGGTTTAACTTCTCCTGATGACCCAAATGAAATAACAGCTGGACGAATGTTGAAGTC
AACAATACACGCGATACCAACTCCTTTCTTTGTTAATTATAAGAAGAAGGTAATTACCAT
GGACTTCAGTGGTTCTTTTCATGGCAAAATGAACGGCCACATAAACTCACAAGGGGTGGA
TCTTGCTATAAAGATTAACTGCAGATACCCACTCATATACCCCCCTAATGTGTGCCCACA
CGGTCACCATAAAGTGGGATCAACCACTGTGTATTACATCACGCGCAATGGCGACTTATC
TTCCAAATACTTTGGGACAAACATGGATTGGTATTTTAAATACGGTGGAATAGTTGACGT
GGATATTTCTCATTTGTCTTTAAGATGGAGAAACTTGATTAAATTTCACGAACTTATTCT
GCTGAGAGCTGGCCGGGGGTTTGAAACAATAATTGCAAAGGAATACATGAAAGGGATCAC
CATTGGTGTTTCAAACCAACTTGCTATGCGATTAAACAATGGCCAGACCAAGAAATATAT
CGCTTATGCTTCAAGGTTTAATAAACCAATGCCAGGAGTTGAGATGAAGTTTACAAATGT
TCCAATGAATGCAACAACTGACTGTAATAGACCTGATACATGTAAATTACCACTGTCCCT
TCCTGCTGATGTAATCCACACATCTTCCAACACCAGCCTTACCAACTACGAAGGAAAAAT
GATCTTCAATATTTCTGCATTAAAATCACCAGGCAATCCTCGAGGGTGTGGATTAGATGG
GCAGTTATATATTCTTATGCTGGAGATGTCGTGCACAATAGGCGGGTATAAATATACTTT
TAAGAATGGACAGTTTGGAGGAACACTTCTTCATAAGATGGTTCATCCTTCGGAATTTGT
ATTGACACTTGCTCCATTAGTGAGGATTTATAATGAAGTAGAAGTGAAGGAATGTCCAAC
GTGGCAAGATATTAAAGGCATCCTCACCCAGTATTATAACTTATACCCCGTAATGTCAAA
GAATGGGATAATCAATCTACATAATTATATGGAAGTGAAACAGAAGTCACAACTTATAAG
AATTGCTATGTTTCAAACTGACTTTGAAGACCCAAAATACATGCCAGCTTCACGTGATTT
ATCGCTGAGTAAGCAGAAATTAATCTGGAACTGGATGCAATGTGGGATGAAGTATGGGAA
TGAAACTGAAGATAAAGATGTCTGTCACCCCTCTGTTGTCGGTGAGAATATGAAAAAGTT
GAAGCTGTATTTACAAAAAGCAGTTAACCTCGAGCTAACCACAATCCCCCCATACTTCAC
TGCATGGTTAAGTTTACAAACTGAATATGCAAGGAATCTAAAAGTAGCAAGACAAATAAA
GTCAATCTACACCGAAGAGATGTTGCATATGTCTATTGCTGCCAATATTCTTAACTCAAT
AGGAGGAACAGTGAACCTCACCAACATAGAAGAGATTCCAATCTACCCAACCAAGCTTGG
CAGTGGTTCCTTTTTTGAACTTGCACCCGGTTTGCAAGTCACGCTACAGAAGTTCTCCAA
GGGCCTAATAAAGGATATTTTCATGGAGATTGAGCTTCCATCACCTGATAGAGACAGAAA
GGACTTTAAACAAATAGTTGGTTTATGGAAGAGACTGCCAGTGCAGGGTAGTGGGGGAAC
TATATCTACTAATATGGATCAACTGTTGCAAGAATTCGAGGGAGAAGTTGTTGATGAAAG
TTATGACGACAACCAAGAAACTTTGGGCGCCACTGAAAAGTTACAACTGCAGAGGAAATG
GGAAAGAGTAAAAAACCATGCGAGTAAAATGTTAAAGATATCTCCATATGGTATAAACAC
TATTGGATCTTTGTACACAAAAATAACATTGTTTCTAACTGCTTTGGAGTCATGCGCTAA
AATTGATGGGTTAAACAATATTGGGCCTGGAACTATATTTGTAGGCGATCCAATTAAACA
GTTGAATATGTCATATTGGTATAATCCCGCGATGGTCAGTGATTTGAAAACTGTGTCTAA
GTTTTGGAGTTCTGAGATGTCAAAAGAAGAACTCGTTCTCAACGAAAGACAAACAAGTTT
CAAGATCAAGAGAGTTGAGCGAGATTCTTTTCCTCCAGGATCAGATCTTGTCTCTCCTCT
TTTCCCCATCACTGATCTTAAGTCTGCCATTCAAGGGGTTGTTGAGATCATTTATCAGGG
TGAAGGGGGAAGTCCATGTTCACCCTTCAAGTCAACCAAGCCTGGTGGGACTCTGTCACT
CCAGACTTCTCATTATGTGAGGTTCATGGAAATTGTACATGGTCGGACGTTGGGTTCAAA
TGAAAAGACCATCGGTTGACAGTGGGATATCATGTTTGAACCTCACACTTTTCGACTGTC
CAAACAAACTCAAAAGTGATGAAGCTTTCTGCTTTGCAGGGGATGAAATAGCTTTTTATG
AAGATGGTGTATGGCCAATAGTAAGCAACCCCACACCAACCATGTACAAACCAGGGACAG
ATGCTCACCATTTTAACCATCAGTTTAATATTCAATACACAAGATTACTTTTCTGTTTAG
AATCTGCATTTGGTGGAAACCCGTCTAAAATGCGGTCATGCATGAGCTACATGTACGACC
TGATAATCACGGGCAAACGATTGGTCAGATCACCAGTGGGTGTCACTAAAGATACATTTA
TTACGCAACCAACTTGCTCAAACTGCCACGCTTCTCCTACTTGGGATTTTATTCGTGACA
AGTCAGAACGAAGTGGATTCCCTTTGATTATAGGATGATATAATGTAATTGTATTTATTA
TATTGGTACATTATCAAAAAAACCTGTTTTAATATATAGGTTCAATACCTGAAACACCTA
TCTACTAAAGTTAAGTTTAGCACATCATTCTGTATGTAGATTGTTGCATACGTTGTTATT
GTGTTAAATTTCTTCCTATTAGTGCACCAATACCATAGATTTTATGACATGGCTATTATT
TTTAAACTTTACTAAACTTTTGCCAAAACTTGTATAAACTAAAATGTTTCGCAGCCTACT
TCATTTGTTGTCTGGTGTTATTTTAGCATTGTATATTTGTTTTTTTTATTGATATATACA
CCAACTTTCTGCCCAAACCACATAAAAACCAAAACCCACATTGCCAAGACTACCCTTGTT
ATTACTTTTAAATGAGAAAAAATGTTGGGAAATGGAAACACAAAAGTAAAAAGAAAAAA

InterProScan

Gene3D
TSP1_rpt_sf (IPR036383) - T[13-75] 2.1E-9
ProSiteProfiles
TSP1_rpt (IPR000884) - T[24-71] 9.262
SMART
TSP1_rpt (IPR000884) - T[27-71] 1.2E-7
SUPERFAMILY
TSP1_rpt_sf (IPR036383) - T[28-70] 2.09E-6
Pfam
TSP1_rpt (IPR000884) - T[30-65] 1.9E-5
Gene3D
Ferritin-like (IPR012347) - T[694-866] 1.3E-29
SUPERFAMILY
Ferritin-like_SF (IPR009078) - T[702-773] 6.35E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value