- Transcript 'KH2012:KH.C13.134.v1...'
Transcript Model
Transcript Id
KH2012:KH.C13.134.v1.A.SL2-1
Possible name(s)
HMCN1; SSPO; THBS1
Gene model
Location
KhC13 [1,192,823 / 1,203,635]
Amino acid sequence
Length: 1,065
>KH.C13.134.v1.A.SL2-1
LRKMFVPIRIVVLACLAMPVTCFAVSLDSWSTWSSCSVTCGSGVATRRWKCSGINCEQKV
ETKECFPEFCPSYLSWPRIHFGGTLVMDANTINNKRCNYQNEYFSNIAAKIKEKSISVVN
DKYTHYMFRINNWNPDGSGHVYFMNSTVKSICTGPSQCSTTDTIVGSVFKEITRGQLATI
DPDWQVTVEVWGLTVQIPGVLKGRLRPGSVQQEGGRVMHANKKIKGYAIGGLGRFKTKVE
NITWESSHYKSMFNNAEELSMIYVIDLFNQFSFSCRMVGTLGLTSPDDPNEITAGRMLKS
TIHAIPTPFFVNYKKKVITMDFSGSFHGKMNGHINSQGVDLAIKINCRYPLIYPPNVCPH
GHHKVGSTTVYYITRNGDLSSKYFGTNMDWYFKYGGIVDVDISHLSLRWRNLIKFHELIL
LRAGRGFETIIAKEYMKGITIGVSNQLAMRLNNGQTKKYIAYASRFNKPMPGVEMKFTNV
PMNATTDCNRPDTCKLPLSLPADVIHTSSNTSLTNYEGKMIFNISALKSPGNPRGCGLDG
QLYILMLEMSCTIGGYKYTFKNGQFGGTLLHKMVHPSEFVLTLAPLVRIYNEVEVKECPT
WQDIKGILTQYYNLYPVMSKNGIINLHNYMEVKQKSQLIRIAMFQTDFEDPKYMPASRDL
SLSKQKLIWNWMQCGMKYGNETEDKDVCHPSVVGENMKKLKLYLQKAVNLELTTIPPYFT
AWLSLQTEYARNLKVARQIKSIYTEEMLHMSIAANILNSIGGTVNLTNIEEIPIYPTKLG
SGSFFELAPGLQVTLQKFSKGLIKDIFMEIELPSPDRDRKDFKQIVGLWKRLPVQGSGGT
ISTNMDQLLQEFEGEVVDESYDDNQETLGATEKLQLQRKWERVKNHASKMLKISPYGINT
IGSLYTKITLFLTALESCAKIDGLNNIGPGTIFVGDPIKQLNMSYWYNPAMVSDLKTVSK
FWSSEMSKEELVLNERQTSFKIKRVERDSFPPGSDLVSPLFPITDLKSAIQGVVEIIYQG
EGGSPCSPFKSTKPGGTLSLQTSHYVRFMEIVHGRTLGSNEKTIG
Nucleotide sequence
Length: 4,079
>KH2012:KH.C13.134.v1.A.SL2-1
TTTGAGGAAAATGTTTGTACCGATCAGGATTGTTGTGTTGGCCTGCCTTGCAATGCCAGT
GACTTGCTTCGCAGTCTCATTGGACAGTTGGAGCACGTGGTCATCCTGCAGTGTGACGTG
TGGTTCGGGGGTTGCCACTCGCCGTTGGAAATGTTCAGGAATAAACTGCGAGCAAAAAGT
CGAAACCAAAGAATGTTTTCCAGAATTTTGCCCAAGCTACCTCTCTTGGCCAAGGATACA
CTTTGGCGGTACACTTGTAATGGACGCGAACACGATAAATAATAAAAGATGCAACTACCA
GAACGAATACTTTTCCAATATAGCGGCCAAGATTAAGGAAAAGTCAATTAGTGTTGTTAA
TGACAAATACACACATTACATGTTCCGTATTAATAACTGGAATCCTGATGGCAGTGGACA
CGTCTATTTCATGAACTCAACGGTCAAATCCATTTGTACAGGTCCATCACAATGCTCTAC
TACTGATACTATTGTTGGATCTGTGTTTAAAGAGATTACTAGAGGCCAGCTTGCCACAAT
TGATCCAGACTGGCAAGTAACTGTAGAAGTATGGGGGTTAACAGTTCAAATCCCTGGTGT
GCTAAAAGGAAGGTTGCGACCAGGATCTGTGCAGCAGGAGGGTGGCCGCGTTATGCATGC
TAACAAGAAGATCAAGGGTTATGCTATTGGTGGCCTAGGAAGGTTTAAAACAAAAGTTGA
AAATATAACATGGGAAAGTTCACATTACAAGTCTATGTTCAACAATGCTGAGGAACTATC
AATGATTTATGTCATTGATCTCTTTAATCAATTCTCATTCTCATGCAGAATGGTGGGGAC
ATTGGGTTTAACTTCTCCTGATGACCCAAATGAAATAACAGCTGGACGAATGTTGAAGTC
AACAATACACGCGATACCAACTCCTTTCTTTGTTAATTATAAGAAGAAGGTAATTACCAT
GGACTTCAGTGGTTCTTTTCATGGCAAAATGAACGGCCACATAAACTCACAAGGGGTGGA
TCTTGCTATAAAGATTAACTGCAGATACCCACTCATATACCCCCCTAATGTGTGCCCACA
CGGTCACCATAAAGTGGGATCAACCACTGTGTATTACATCACGCGCAATGGCGACTTATC
TTCCAAATACTTTGGGACAAACATGGATTGGTATTTTAAATACGGTGGAATAGTTGACGT
GGATATTTCTCATTTGTCTTTAAGATGGAGAAACTTGATTAAATTTCACGAACTTATTCT
GCTGAGAGCTGGCCGGGGGTTTGAAACAATAATTGCAAAGGAATACATGAAAGGGATCAC
CATTGGTGTTTCAAACCAACTTGCTATGCGATTAAACAATGGCCAGACCAAGAAATATAT
CGCTTATGCTTCAAGGTTTAATAAACCAATGCCAGGAGTTGAGATGAAGTTTACAAATGT
TCCAATGAATGCAACAACTGACTGTAATAGACCTGATACATGTAAATTACCACTGTCCCT
TCCTGCTGATGTAATCCACACATCTTCCAACACCAGCCTTACCAACTACGAAGGAAAAAT
GATCTTCAATATTTCTGCATTAAAATCACCAGGCAATCCTCGAGGGTGTGGATTAGATGG
GCAGTTATATATTCTTATGCTGGAGATGTCGTGCACAATAGGCGGGTATAAATATACTTT
TAAGAATGGACAGTTTGGAGGAACACTTCTTCATAAGATGGTTCATCCTTCGGAATTTGT
ATTGACACTTGCTCCATTAGTGAGGATTTATAATGAAGTAGAAGTGAAGGAATGTCCAAC
GTGGCAAGATATTAAAGGCATCCTCACCCAGTATTATAACTTATACCCCGTAATGTCAAA
GAATGGGATAATCAATCTACATAATTATATGGAAGTGAAACAGAAGTCACAACTTATAAG
AATTGCTATGTTTCAAACTGACTTTGAAGACCCAAAATACATGCCAGCTTCACGTGATTT
ATCGCTGAGTAAGCAGAAATTAATCTGGAACTGGATGCAATGTGGGATGAAGTATGGGAA
TGAAACTGAAGATAAAGATGTCTGTCACCCCTCTGTTGTCGGTGAGAATATGAAAAAGTT
GAAGCTGTATTTACAAAAAGCAGTTAACCTCGAGCTAACCACAATCCCCCCATACTTCAC
TGCATGGTTAAGTTTACAAACTGAATATGCAAGGAATCTAAAAGTAGCAAGACAAATAAA
GTCAATCTACACCGAAGAGATGTTGCATATGTCTATTGCTGCCAATATTCTTAACTCAAT
AGGAGGAACAGTGAACCTCACCAACATAGAAGAGATTCCAATCTACCCAACCAAGCTTGG
CAGTGGTTCCTTTTTTGAACTTGCACCCGGTTTGCAAGTCACGCTACAGAAGTTCTCCAA
GGGCCTAATAAAGGATATTTTCATGGAGATTGAGCTTCCATCACCTGATAGAGACAGAAA
GGACTTTAAACAAATAGTTGGTTTATGGAAGAGACTGCCAGTGCAGGGTAGTGGGGGAAC
TATATCTACTAATATGGATCAACTGTTGCAAGAATTCGAGGGAGAAGTTGTTGATGAAAG
TTATGACGACAACCAAGAAACTTTGGGCGCCACTGAAAAGTTACAACTGCAGAGGAAATG
GGAAAGAGTAAAAAACCATGCGAGTAAAATGTTAAAGATATCTCCATATGGTATAAACAC
TATTGGATCTTTGTACACAAAAATAACATTGTTTCTAACTGCTTTGGAGTCATGCGCTAA
AATTGATGGGTTAAACAATATTGGGCCTGGAACTATATTTGTAGGCGATCCAATTAAACA
GTTGAATATGTCATATTGGTATAATCCCGCGATGGTCAGTGATTTGAAAACTGTGTCTAA
GTTTTGGAGTTCTGAGATGTCAAAAGAAGAACTCGTTCTCAACGAAAGACAAACAAGTTT
CAAGATCAAGAGAGTTGAGCGAGATTCTTTTCCTCCAGGATCAGATCTTGTCTCTCCTCT
TTTCCCCATCACTGATCTTAAGTCTGCCATTCAAGGGGTTGTTGAGATCATTTATCAGGG
TGAAGGGGGAAGTCCATGTTCACCCTTCAAGTCAACCAAGCCTGGTGGGACTCTGTCACT
CCAGACTTCTCATTATGTGAGGTTCATGGAAATTGTACATGGTCGGACGTTGGGTTCAAA
TGAAAAGACCATCGGTTGACAGTGGGATATCATGTTTGAACCTCACACTTTTCGACTGTC
CAAACAAACTCAAAAGTGATGAAGCTTTCTGCTTTGCAGGGGATGAAATAGCTTTTTATG
AAGATGGTGTATGGCCAATAGTAAGCAACCCCACACCAACCATGTACAAACCAGGGACAG
ATGCTCACCATTTTAACCATCAGTTTAATATTCAATACACAAGATTACTTTTCTGTTTAG
AATCTGCATTTGGTGGAAACCCGTCTAAAATGCGGTCATGCATGAGCTACATGTACGACC
TGATAATCACGGGCAAACGATTGGTCAGATCACCAGTGGGTGTCACTAAAGATACATTTA
TTACGCAACCAACTTGCTCAAACTGCCACGCTTCTCCTACTTGGGATTTTATTCGTGACA
AGTCAGAACGAAGTGGATTCCCTTTGATTATAGGATGATATAATGTAATTGTATTTATTA
TATTGGTACATTATCAAAAAAACCTGTTTTAATATATAGGTTCAATACCTGAAACACCTA
TCTACTAAAGTTAAGTTTAGCACATCATTCTGTATGTAGATTGTTGCATACGTTGTTATT
GTGTTAAATTTCTTCCTATTAGTGCACCAATACCATAGATTTTATGACATGGCTATTATT
TTTAAACTTTACTAAACTTTTGCCAAAACTTGTATAAACTAAAATGTTTCGCAGCCTACT
TCATTTGTTGTCTGGTGTTATTTTAGCATTGTATATTTGTTTTTTTTATTGATATATACA
CCAACTTTCTGCCCAAACCACATAAAAACCAAAACCCACATTGCCAAGACTACCCTTGTT
ATTACTTTTAAATGAGAAAAAATGTTGGGAAATGGAAACACAAAAGTAAAAAGAAAAAA
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[13-75] 2.1E-9 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[24-71] 9.262 |
| SMART |
TSP1_rpt (IPR000884) - T[27-71] 1.2E-7 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[28-70] 2.09E-6 |
| Pfam |
TSP1_rpt (IPR000884) - T[30-65] 1.9E-5 |
| Gene3D |
Ferritin-like (IPR012347) - T[694-866] 1.3E-29 |
| SUPERFAMILY |
Ferritin-like_SF (IPR009078) - T[702-773] 6.35E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|