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  1. Transcript 'KH2012:KH.C12.8.v4.A...'

Transcript Model

Transcript Id

KH2012:KH.C12.8.v4.A.SL4-1

Possible name(s)

DEAF1; SAMD11; SAMD7

Gene model

KH2012:KH.C12.8

Location

KhC12 [3,425,836 / 3,429,971]

Sequences

Amino acid sequence

Length: 594

>KH.C12.8.v4.A.SL4-1
SESPPMKRRHSDDDDAFPVPNGRDNEHNVRDKDRESSSAEPLCLASHGSSKKEKTHSNKT
SKKENDVIFDPRRIGSNDHNKSPNGRNHYPDFNDCASNGYRPNLGFAEYALFDAMKRAVA
SVSGGSYPDSVSTPPPNRRDVSSPNRGYINLDSTSPRGLTSQNYPQSRNQQPMMELVSPH
RKNGTSRESYGFGNSVDSRLRNGGLFDAPLPSNKAPVTVLHHRPNSYSPHRSNPSHTHHY
YGMPPPSSSRHSPDGRGARTPRREVPFSAPARFDRKTNTPIKKTPDHQRSRLHGRSDARG
TKMLDLQNHAIPMMSLTYSNKKASRGRQSDSSPPQFSTGSATSNAGKCVYSDDEVARTSD
LNRRLSSSAPPISLPSSKSRKFYTDENNNRSSDDQPSSRQYVFGGGKRAKSSSPGSPSDA
PFFCDDRRSQDPVDPCGFSCGAACQNSFQELRLRELSCAIDQMAELSVDGVCEMLEEIGC
GEYQEVFRKNCISGDALPLLAEHHLVEMMGLKLGHALKIIAQIHRRLGNHCFLMTNQLPA
FRHASPIDYLCLRKQAATPNGQSDNITTPARVAKEAEIKKVAENEKVPENTTAE

Nucleotide sequence

Length: 2,420

>KH2012:KH.C12.8.v4.A.SL4-1
AGTGAAAGCCCTCCAATGAAAAGAAGACACTCGGACGACGACGATGCTTTTCCAGTGCCC
AACGGTAGGGATAATGAGCATAATGTAAGAGACAAAGACAGGGAAAGTTCTTCTGCTGAA
CCACTTTGCCTCGCCTCGCACGGATCTTCTAAGAAGGAAAAAACGCACTCCAATAAAACA
AGCAAAAAAGAAAACGATGTAATATTCGACCCTCGTCGCATCGGATCTAACGACCACAAT
AAGTCGCCTAACGGAAGAAATCATTATCCAGACTTCAACGATTGTGCATCGAACGGTTAC
CGACCAAACTTGGGCTTTGCTGAATACGCTTTGTTTGACGCTATGAAACGCGCAGTTGCG
AGTGTCTCTGGTGGATCCTACCCTGACAGTGTTAGTACCCCACCTCCTAACAGAAGAGAC
GTATCTTCACCTAACAGAGGCTACATCAATCTTGACTCTACGTCACCACGGGGTCTTACA
TCTCAAAATTACCCGCAATCCCGAAACCAACAGCCTATGATGGAACTAGTGTCTCCCCAC
CGTAAGAATGGGACGTCTCGAGAATCCTATGGTTTCGGCAACTCGGTCGACTCTCGGTTA
CGAAACGGAGGCCTCTTCGACGCACCGTTGCCAAGTAACAAAGCGCCTGTTACGGTTCTA
CACCATCGGCCCAACTCCTATAGCCCCCACAGAAGTAACCCTTCCCATACCCACCATTAC
TATGGCATGCCACCACCTTCAAGCAGTCGCCACTCACCCGATGGTAGGGGGGCTCGAACC
CCGCGTAGGGAAGTTCCCTTTTCCGCTCCTGCCCGTTTTGATCGGAAGACGAACACTCCA
ATAAAAAAGACCCCGGATCATCAGAGGTCTCGTCTTCACGGAAGATCGGATGCGAGAGGA
ACAAAGATGTTAGATCTTCAGAATCATGCTATACCAATGATGTCGCTGACATACAGCAAC
AAAAAGGCTTCTCGTGGACGTCAATCTGATTCTAGTCCGCCTCAATTCTCTACTGGATCT
GCAACTTCAAATGCAGGCAAATGCGTTTACAGCGACGATGAAGTAGCTCGTACAAGCGAC
CTCAACAGACGCCTAAGTTCCAGCGCACCCCCTATATCCCTGCCAAGCTCAAAATCTAGG
AAATTTTACACGGACGAAAATAATAATCGTTCATCTGATGATCAGCCGTCTTCTCGACAA
TATGTTTTCGGAGGTGGTAAAAGAGCAAAGTCCTCTTCTCCAGGATCTCCGTCCGATGCT
CCCTTTTTCTGCGATGATCGCCGCAGCCAAGATCCAGTTGATCCGTGTGGATTTTCTTGC
GGAGCTGCATGTCAAAATTCTTTCCAAGAGCTGCGCTTACGGGAGCTCTCTTGCGCTATC
GATCAAATGGCAGAACTGTCGGTAGATGGCGTGTGCGAGATGCTTGAAGAGATAGGCTGC
GGGGAGTATCAAGAAGTGTTTCGAAAGAATTGTATTTCTGGCGATGCCTTACCGCTGCTG
GCGGAGCACCATCTTGTCGAAATGATGGGCTTAAAGCTTGGTCATGCCCTGAAGATTATT
GCCCAGATACACCGTCGCCTAGGAAACCATTGTTTCCTGATGACCAATCAGCTTCCTGCG
TTTCGCCATGCCTCCCCAATCGATTACCTCTGCCTCAGAAAGCAAGCGGCGACACCGAAC
GGACAGTCGGATAACATTACAACGCCGGCAAGAGTCGCTAAAGAGGCTGAAATTAAAAAG
GTTGCAGAAAACGAAAAAGTTCCCGAAAATACTACTGCGGAATGATTTTATTCTGTTGTT
GAGGCATGTTCGACTTTAGAACTTTAATATATCTTGCTAAGAACCTGTATTCCACACTGG
AAAAATCCAGTTGTCTAGCTATTTTGTCAAATTAATTTCATTATATATTTGGGCCACTTA
AAAGTAGAAATTTATATCTTACCTCATGCTTTAAGTGGCTGCGTGTAATTCTGTTTAAAA
TGTTGTAAATGTTAATTTATAATGTGGCACAAGACACGCATATTTCCACATATATAGCTT
ACTGTGAAAGCGAATCTTCCATTTCGTATTATAAAGACACGGACCGTCACCGTTTCTTCA
CAATTTTGTTTCTTCATTTTTATTTTTCTTCACTCCTAGCCCTACCAATATAACATACCC
ACGTTATATTGCTGCCTTACTGGGCAAATGTAACCAAATCCCTAATACGTTCTCACTGCG
GGGTAACTTTTTTAGGTTACAATTCATATCCATTAAGCCTATTTTGTAAATACGACTTAC
ATACCCAGGAATACTCTTCATTTGTTTATTATCAGTTCGCTTTGAAAGTTGTTTACGTTG
TGCAATGTTTTCTTTATTTTTCACGCGTTCCTTTTGTGATCTTCATTCATTTGAGAATAA
AATTTTCAAATTTGTAAACT

InterProScan

SUPERFAMILY
SAM/pointed_sf (IPR013761) - T[462-527] 4.3E-15
SMART
SAM (IPR001660) - T[463-529] 2.0E-10
ProSiteProfiles
SAM (IPR001660) - T[466-529] 10.584
Pfam
SAM (IPR001660) - T[467-525] 2.1E-13

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value