- Transcript 'KH2012:KH.C12.8.v3.A...'
Transcript Model
Transcript Id
KH2012:KH.C12.8.v3.A.SL1-1
Possible name(s)
DEAF1; SAMD11; SAMD7
Gene model
Location
KhC12 [3,425,836 / 3,444,933]
Amino acid sequence
Length: 1,001
>KH.C12.8.v3.A.SL1-1
KYCYEITKKFPLSKVKKNFQLRRMPYEYDPHNHFLNLLATRAFFNVKQEPMDLPLADKLM
SSFNTAGYFGATPDALMGRDLRSLGGDSNFLSAAYRSPLGMARPPAELSPDTFADQLRHN
DSASMVVCRPHTGKTMQNPFHASLESPPGNSGRSNTLQQNHQSSTSLHHFVTRYTIEKPD
DPSRLGVEICLEHSTTNEPVIEVECGGNKGMLYVTKLCQGSKGQSILFNDEWLTPNEFQF
ISGRETAKDWKRSIRHCGKSLKTLMSKGILQVHPPVCECDYCKGHGPAVVQEKPGKKRPV
GSGSADIVRRNSMSENTAASTGSSTPSSTDSNKVFGMPDTHGPTTIHKGREGGLNSIISQ
LHNKKAICGNDVTAGTESLDLSVRCSSSTSPNGDCERKRQHRPSNSQSESPPMKRRHSDD
DDAFPVPNGRDNEHNVRDKDRESSSAEPLCLASHGSSKKEKTHSNKTSKKENDVIFDPRR
IGSNDHNKSPNGRNHYPDFNDCASNGYRPNLGFAEYALFDAMKRAVASVSGGSYPDSVST
PPPNRRDVSSPNRGYINLDSTSPRGLTSQNYPQSRNQQPMMELVSPHRKNGTSRESYGFG
NSVDSRLRNGGLFDAPLPSNKAPVTVLHHRPNSYSPHRSNPSHTHHYYGMPPPSSSRHSP
DGRGARTPRREVPFSAPARFDRKTNTPIKKTPDHQRSRLHGRSDARGTKMLDLQNHAIPM
MSLTYSNKKASRGRQSDSSPPQFSTGSATSNAGKCVYSDDEVARTSDLNRRLSSSAPPIS
LPSSKSRKFYTDENNNRSSDDQPSSRQYVFGGGKRAKSSSPGSPSDAPFFCDDRRSQDPV
DPCGFSCGAACQNSFQELRLRELSCAIDQMAELSVDGVCEMLEEIGCGEYQEVFRKNCIS
GDALPLLAEHHLVEMMGLKLGHALKIIAQIHRRLGNHCFLMTNQLPAFRHASPIDYLCLR
KQAATPNGQSDNITTPARVAKEAEIKKVAENEKVPENTTAE
Nucleotide sequence
Length: 3,655
>KH2012:KH.C12.8.v3.A.SL1-1
TGTTTGTAATGTAGAAATACTGTTACGAAATCACGAAAAAGTTCCCATTGTCAAAAGTCA
AGAAAAATTTTCAGTTGCGAAGAATGCCGTACGAGTATGACCCACACAATCACTTTTTAA
ATTTGCTGGCAACGCGTGCTTTCTTCAACGTAAAACAGGAACCGATGGATCTTCCTTTAG
CAGATAAACTCATGTCGTCGTTTAACACTGCTGGCTATTTCGGAGCAACACCTGACGCCC
TTATGGGTAGGGATCTTCGATCGCTAGGTGGAGATAGCAACTTCCTGAGCGCTGCTTACC
GATCGCCGTTGGGTATGGCACGCCCACCAGCGGAATTATCTCCCGACACTTTTGCTGATC
AGTTACGTCATAATGATTCCGCAAGCATGGTCGTATGTAGACCTCATACGGGCAAGACGA
TGCAGAATCCATTTCACGCTTCTCTGGAGAGCCCACCAGGCAACAGCGGGCGATCGAACA
CCTTACAGCAGAACCATCAATCCTCTACCAGTCTCCACCATTTTGTAACTCGCTACACGA
TCGAAAAACCGGACGACCCGTCTCGACTTGGCGTCGAAATTTGCCTGGAGCATAGCACTA
CTAACGAACCTGTTATAGAAGTGGAATGTGGTGGCAACAAAGGCATGTTATACGTCACCA
AGCTATGCCAGGGGAGCAAAGGTCAATCTATTCTCTTTAACGACGAATGGCTTACTCCAA
ACGAATTCCAATTTATCAGCGGACGTGAGACGGCAAAGGACTGGAAACGTAGCATCCGGC
ATTGTGGAAAAAGTCTAAAGACACTGATGTCAAAAGGCATTTTACAAGTTCATCCTCCAG
TATGTGAATGCGACTACTGTAAAGGACACGGGCCAGCCGTTGTGCAGGAAAAACCAGGGA
AAAAGCGGCCAGTAGGCTCGGGTTCGGCTGACATTGTTCGGCGAAATTCTATGTCCGAAA
ACACAGCCGCTTCTACAGGTTCATCTACCCCGTCTTCCACCGATTCAAATAAAGTTTTCG
GAATGCCAGACACACACGGCCCTACCACCATTCATAAAGGGAGAGAGGGCGGACTAAATT
CCATCATCTCTCAACTCCACAACAAAAAGGCTATTTGCGGAAATGACGTCACTGCTGGGA
CCGAATCTCTTGATCTGAGCGTTCGGTGTTCTTCCTCTACGTCACCGAATGGCGATTGTG
AAAGAAAAAGACAACACCGACCAAGCAACAGTCAGAGTGAAAGCCCTCCAATGAAAAGAA
GACACTCGGACGACGACGATGCTTTTCCAGTGCCCAACGGTAGGGATAATGAGCATAATG
TAAGAGACAAAGACAGGGAAAGTTCTTCTGCTGAACCACTTTGCCTCGCCTCGCACGGAT
CTTCTAAGAAGGAAAAAACGCACTCCAATAAAACAAGCAAAAAAGAAAACGATGTAATAT
TCGACCCTCGTCGCATCGGATCTAACGACCACAATAAGTCGCCTAACGGAAGAAATCATT
ATCCAGACTTCAACGATTGTGCATCGAACGGTTACCGACCAAACTTGGGCTTTGCTGAAT
ACGCTTTGTTTGACGCTATGAAACGCGCAGTTGCGAGTGTCTCTGGTGGATCCTACCCTG
ACAGTGTTAGTACCCCACCTCCTAACAGAAGAGACGTATCTTCACCTAACAGAGGCTACA
TCAATCTTGACTCTACGTCACCACGGGGTCTTACATCTCAAAATTACCCGCAATCCCGAA
ACCAACAGCCTATGATGGAACTAGTGTCTCCCCACCGTAAGAATGGGACGTCTCGAGAAT
CCTATGGTTTCGGCAACTCGGTCGACTCTCGGTTACGAAACGGAGGCCTCTTCGACGCAC
CGTTGCCAAGTAACAAAGCGCCTGTTACGGTTCTACACCATCGGCCCAACTCCTATAGCC
CCCACAGAAGTAACCCTTCCCATACCCACCATTACTATGGCATGCCACCACCTTCAAGCA
GTCGCCACTCACCCGATGGTAGGGGGGCTCGAACCCCGCGTAGGGAAGTTCCCTTTTCCG
CTCCTGCCCGTTTTGATCGGAAGACGAACACTCCAATAAAAAAGACCCCGGATCATCAGA
GGTCTCGTCTTCACGGAAGATCGGATGCGAGAGGAACAAAGATGTTAGATCTTCAGAATC
ATGCTATACCAATGATGTCGCTGACATACAGCAACAAAAAGGCTTCTCGTGGACGTCAAT
CTGATTCTAGTCCGCCTCAATTCTCTACTGGATCTGCAACTTCAAATGCAGGCAAATGCG
TTTACAGCGACGATGAAGTAGCTCGTACAAGCGACCTCAACAGACGCCTAAGTTCCAGCG
CACCCCCTATATCCCTGCCAAGCTCAAAATCTAGGAAATTTTACACGGACGAAAATAATA
ATCGTTCATCTGATGATCAGCCGTCTTCTCGACAATATGTTTTCGGAGGTGGTAAAAGAG
CAAAGTCCTCTTCTCCAGGATCTCCGTCCGATGCTCCCTTTTTCTGCGATGATCGCCGCA
GCCAAGATCCAGTTGATCCGTGTGGATTTTCTTGCGGAGCTGCATGTCAAAATTCTTTCC
AAGAGCTGCGCTTACGGGAGCTCTCTTGCGCTATCGATCAAATGGCAGAACTGTCGGTAG
ATGGCGTGTGCGAGATGCTTGAAGAGATAGGCTGCGGGGAGTATCAAGAAGTGTTTCGAA
AGAATTGTATTTCTGGCGATGCCTTACCGCTGCTGGCGGAGCACCATCTTGTCGAAATGA
TGGGCTTAAAGCTTGGTCATGCCCTGAAGATTATTGCCCAGATACACCGTCGCCTAGGAA
ACCATTGTTTCCTGATGACCAATCAGCTTCCTGCGTTTCGCCATGCCTCCCCAATCGATT
ACCTCTGCCTCAGAAAGCAAGCGGCGACACCGAACGGACAGTCGGATAACATTACAACGC
CGGCAAGAGTCGCTAAAGAGGCTGAAATTAAAAAGGTTGCAGAAAACGAAAAAGTTCCCG
AAAATACTACTGCGGAATGATTTTATTCTGTTGTTGAGGCATGTTCGACTTTAGAACTTT
AATATATCTTGCTAAGAACCTGTATTCCACACTGGAAAAATCCAGTTGTCTAGCTATTTT
GTCAAATTAATTTCATTATATATTTGGGCCACTTAAAAGTAGAAATTTATATCTTACCTC
ATGCTTTAAGTGGCTGCGTGTAATTCTGTTTAAAATGTTGTAAATGTTAATTTATAATGT
GGCACAAGACACGCATATTTCCACATATATAGCTTACTGTGAAAGCGAATCTTCCATTTC
GTATTATAAAGACACGGACCGTCACCGTTTCTTCACAATTTTGTTTCTTCATTTTTATTT
TTCTTCACTCCTAGCCCTACCAATATAACATACCCACGTTATATTGCTGCCTTACTGGGC
AAATGTAACCAAATCCCTAATACGTTCTCACTGCGGGGTAACTTTTTTAGGTTACAATTC
ATATCCATTAAGCCTATTTTGTAAATACGACTTACATACCCAGGAATACTCTTCATTTGT
TTATTATCAGTTCGCTTTGAAAGTTGTTTACGTTGTGCAATGTTTTCTTTATTTTTCACG
CGTTCCTTTTGTGATCTTCATTCATTTGAGAATAAAATTTTCAAATTTGTAAACT
| ProSiteProfiles |
SAND_dom (IPR000770) - T[191-271] 18.181 |
| Gene3D |
SAND-like_dom_sf (IPR010919) - T[193-285] 2.3E-27 |
| SUPERFAMILY |
SAND-like_dom_sf (IPR010919) - T[195-282] 2.09E-27 |
| PANTHER |
GMEB1/2 (IPR024830) - T[197-293] 1.5E-61 - T[527-574] 1.5E-61 |
| Pfam |
SAND_dom (IPR000770) - T[197-270] 5.1E-23 |
| SMART |
SAND_dom (IPR000770) - T[199-271] 1.6E-23 |
| SUPERFAMILY |
SAM/pointed_sf (IPR013761) - T[869-934] 8.77E-15 |
| SMART |
SAM (IPR001660) - T[870-936] 2.0E-10 |
| ProSiteProfiles |
SAM (IPR001660) - T[873-936] 10.584 |
| Pfam |
SAM (IPR001660) - T[874-932] 4.1E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|
