- Transcript 'KH2012:KH.C12.8.v3.A...'
Transcript Model
Transcript Id
KH2012:KH.C12.8.v3.A.nonSL5-1
Possible name(s)
DEAF1; SAMD11; SAMD7
Gene model
Location
KhC12 [3,425,836 / 3,444,946]
Amino acid sequence
Length: 1,001
>KH.C12.8.v3.A.nonSL5-1
KYCYEITKKFPLSKVKKNFQLRRMPYEYDPHNHFLNLLATRAFFNVKQEPMDLPLADKLM
SSFNTAGYFGATPDALMGRDLRSLGGDSNFLSAAYRSPLGMARPPAELSPDTFADQLRHN
DSASMVVCRPHTGKTMQNPFHASLESPPGNSGRSNTLQQNHQSSTSLHHFVTRYTIEKPD
DPSRLGVEICLEHSTTNEPVIEVECGGNKGMLYVTKLCQGSKGQSILFNDEWLTPNEFQF
ISGRETAKDWKRSIRHCGKSLKTLMSKGILQVHPPVCECDYCKGHGPAVVQEKPGKKRPV
GSGSADIVRRNSMSENTAASTGSSTPSSTDSNKVFGMPDTHGPTTIHKGREGGLNSIISQ
LHNKKAICGNDVTAGTESLDLSVRCSSSTSPNGDCERKRQHRPSNSQSESPPMKRRHSDD
DDAFPVPNGRDNEHNVRDKDRESSSAEPLCLASHGSSKKEKTHSNKTSKKENDVIFDPRR
IGSNDHNKSPNGRNHYPDFNDCASNGYRPNLGFAEYALFDAMKRAVASVSGGSYPDSVST
PPPNRRDVSSPNRGYINLDSTSPRGLTSQNYPQSRNQQPMMELVSPHRKNGTSRESYGFG
NSVDSRLRNGGLFDAPLPSNKAPVTVLHHRPNSYSPHRSNPSHTHHYYGMPPPSSSRHSP
DGRGARTPRREVPFSAPARFDRKTNTPIKKTPDHQRSRLHGRSDARGTKMLDLQNHAIPM
MSLTYSNKKASRGRQSDSSPPQFSTGSATSNAGKCVYSDDEVARTSDLNRRLSSSAPPIS
LPSSKSRKFYTDENNNRSSDDQPSSRQYVFGGGKRAKSSSPGSPSDAPFFCDDRRSQDPV
DPCGFSCGAACQNSFQELRLRELSCAIDQMAELSVDGVCEMLEEIGCGEYQEVFRKNCIS
GDALPLLAEHHLVEMMGLKLGHALKIIAQIHRRLGNHCFLMTNQLPAFRHASPIDYLCLR
KQAATPNGQSDNITTPARVAKEAEIKKVAENEKVPENTTAE
Nucleotide sequence
Length: 3,668
>KH2012:KH.C12.8.v3.A.nonSL5-1
ATTCCATCTACAGTGTTTGTAATGTAGAAATACTGTTACGAAATCACGAAAAAGTTCCCA
TTGTCAAAAGTCAAGAAAAATTTTCAGTTGCGAAGAATGCCGTACGAGTATGACCCACAC
AATCACTTTTTAAATTTGCTGGCAACGCGTGCTTTCTTCAACGTAAAACAGGAACCGATG
GATCTTCCTTTAGCAGATAAACTCATGTCGTCGTTTAACACTGCTGGCTATTTCGGAGCA
ACACCTGACGCCCTTATGGGTAGGGATCTTCGATCGCTAGGTGGAGATAGCAACTTCCTG
AGCGCTGCTTACCGATCGCCGTTGGGTATGGCACGCCCACCAGCGGAATTATCTCCCGAC
ACTTTTGCTGATCAGTTACGTCATAATGATTCCGCAAGCATGGTCGTATGTAGACCTCAT
ACGGGCAAGACGATGCAGAATCCATTTCACGCTTCTCTGGAGAGCCCACCAGGCAACAGC
GGGCGATCGAACACCTTACAGCAGAACCATCAATCCTCTACCAGTCTCCACCATTTTGTA
ACTCGCTACACGATCGAAAAACCGGACGACCCGTCTCGACTTGGCGTCGAAATTTGCCTG
GAGCATAGCACTACTAACGAACCTGTTATAGAAGTGGAATGTGGTGGCAACAAAGGCATG
TTATACGTCACCAAGCTATGCCAGGGGAGCAAAGGTCAATCTATTCTCTTTAACGACGAA
TGGCTTACTCCAAACGAATTCCAATTTATCAGCGGACGTGAGACGGCAAAGGACTGGAAA
CGTAGCATCCGGCATTGTGGAAAAAGTCTAAAGACACTGATGTCAAAAGGCATTTTACAA
GTTCATCCTCCAGTATGTGAATGCGACTACTGTAAAGGACACGGGCCAGCCGTTGTGCAG
GAAAAACCAGGGAAAAAGCGGCCAGTAGGCTCGGGTTCGGCTGACATTGTTCGGCGAAAT
TCTATGTCCGAAAACACAGCCGCTTCTACAGGTTCATCTACCCCGTCTTCCACCGATTCA
AATAAAGTTTTCGGAATGCCAGACACACACGGCCCTACCACCATTCATAAAGGGAGAGAG
GGCGGACTAAATTCCATCATCTCTCAACTCCACAACAAAAAGGCTATTTGCGGAAATGAC
GTCACTGCTGGGACCGAATCTCTTGATCTGAGCGTTCGGTGTTCTTCCTCTACGTCACCG
AATGGCGATTGTGAAAGAAAAAGACAACACCGACCAAGCAACAGTCAGAGTGAAAGCCCT
CCAATGAAAAGAAGACACTCGGACGACGACGATGCTTTTCCAGTGCCCAACGGTAGGGAT
AATGAGCATAATGTAAGAGACAAAGACAGGGAAAGTTCTTCTGCTGAACCACTTTGCCTC
GCCTCGCACGGATCTTCTAAGAAGGAAAAAACGCACTCCAATAAAACAAGCAAAAAAGAA
AACGATGTAATATTCGACCCTCGTCGCATCGGATCTAACGACCACAATAAGTCGCCTAAC
GGAAGAAATCATTATCCAGACTTCAACGATTGTGCATCGAACGGTTACCGACCAAACTTG
GGCTTTGCTGAATACGCTTTGTTTGACGCTATGAAACGCGCAGTTGCGAGTGTCTCTGGT
GGATCCTACCCTGACAGTGTTAGTACCCCACCTCCTAACAGAAGAGACGTATCTTCACCT
AACAGAGGCTACATCAATCTTGACTCTACGTCACCACGGGGTCTTACATCTCAAAATTAC
CCGCAATCCCGAAACCAACAGCCTATGATGGAACTAGTGTCTCCCCACCGTAAGAATGGG
ACGTCTCGAGAATCCTATGGTTTCGGCAACTCGGTCGACTCTCGGTTACGAAACGGAGGC
CTCTTCGACGCACCGTTGCCAAGTAACAAAGCGCCTGTTACGGTTCTACACCATCGGCCC
AACTCCTATAGCCCCCACAGAAGTAACCCTTCCCATACCCACCATTACTATGGCATGCCA
CCACCTTCAAGCAGTCGCCACTCACCCGATGGTAGGGGGGCTCGAACCCCGCGTAGGGAA
GTTCCCTTTTCCGCTCCTGCCCGTTTTGATCGGAAGACGAACACTCCAATAAAAAAGACC
CCGGATCATCAGAGGTCTCGTCTTCACGGAAGATCGGATGCGAGAGGAACAAAGATGTTA
GATCTTCAGAATCATGCTATACCAATGATGTCGCTGACATACAGCAACAAAAAGGCTTCT
CGTGGACGTCAATCTGATTCTAGTCCGCCTCAATTCTCTACTGGATCTGCAACTTCAAAT
GCAGGCAAATGCGTTTACAGCGACGATGAAGTAGCTCGTACAAGCGACCTCAACAGACGC
CTAAGTTCCAGCGCACCCCCTATATCCCTGCCAAGCTCAAAATCTAGGAAATTTTACACG
GACGAAAATAATAATCGTTCATCTGATGATCAGCCGTCTTCTCGACAATATGTTTTCGGA
GGTGGTAAAAGAGCAAAGTCCTCTTCTCCAGGATCTCCGTCCGATGCTCCCTTTTTCTGC
GATGATCGCCGCAGCCAAGATCCAGTTGATCCGTGTGGATTTTCTTGCGGAGCTGCATGT
CAAAATTCTTTCCAAGAGCTGCGCTTACGGGAGCTCTCTTGCGCTATCGATCAAATGGCA
GAACTGTCGGTAGATGGCGTGTGCGAGATGCTTGAAGAGATAGGCTGCGGGGAGTATCAA
GAAGTGTTTCGAAAGAATTGTATTTCTGGCGATGCCTTACCGCTGCTGGCGGAGCACCAT
CTTGTCGAAATGATGGGCTTAAAGCTTGGTCATGCCCTGAAGATTATTGCCCAGATACAC
CGTCGCCTAGGAAACCATTGTTTCCTGATGACCAATCAGCTTCCTGCGTTTCGCCATGCC
TCCCCAATCGATTACCTCTGCCTCAGAAAGCAAGCGGCGACACCGAACGGACAGTCGGAT
AACATTACAACGCCGGCAAGAGTCGCTAAAGAGGCTGAAATTAAAAAGGTTGCAGAAAAC
GAAAAAGTTCCCGAAAATACTACTGCGGAATGATTTTATTCTGTTGTTGAGGCATGTTCG
ACTTTAGAACTTTAATATATCTTGCTAAGAACCTGTATTCCACACTGGAAAAATCCAGTT
GTCTAGCTATTTTGTCAAATTAATTTCATTATATATTTGGGCCACTTAAAAGTAGAAATT
TATATCTTACCTCATGCTTTAAGTGGCTGCGTGTAATTCTGTTTAAAATGTTGTAAATGT
TAATTTATAATGTGGCACAAGACACGCATATTTCCACATATATAGCTTACTGTGAAAGCG
AATCTTCCATTTCGTATTATAAAGACACGGACCGTCACCGTTTCTTCACAATTTTGTTTC
TTCATTTTTATTTTTCTTCACTCCTAGCCCTACCAATATAACATACCCACGTTATATTGC
TGCCTTACTGGGCAAATGTAACCAAATCCCTAATACGTTCTCACTGCGGGGTAACTTTTT
TAGGTTACAATTCATATCCATTAAGCCTATTTTGTAAATACGACTTACATACCCAGGAAT
ACTCTTCATTTGTTTATTATCAGTTCGCTTTGAAAGTTGTTTACGTTGTGCAATGTTTTC
TTTATTTTTCACGCGTTCCTTTTGTGATCTTCATTCATTTGAGAATAAAATTTTCAAATT
TGTAAACT
| ProSiteProfiles |
SAND_dom (IPR000770) - T[191-271] 18.181 |
| Gene3D |
SAND-like_dom_sf (IPR010919) - T[193-285] 2.3E-27 |
| SUPERFAMILY |
SAND-like_dom_sf (IPR010919) - T[195-282] 2.09E-27 |
| PANTHER |
GMEB1/2 (IPR024830) - T[197-293] 1.5E-61 - T[527-574] 1.5E-61 |
| Pfam |
SAND_dom (IPR000770) - T[197-270] 5.1E-23 |
| SMART |
SAND_dom (IPR000770) - T[199-271] 1.6E-23 |
| SUPERFAMILY |
SAM/pointed_sf (IPR013761) - T[869-934] 8.77E-15 |
| SMART |
SAM (IPR001660) - T[870-936] 2.0E-10 |
| ProSiteProfiles |
SAM (IPR001660) - T[873-936] 10.584 |
| Pfam |
SAM (IPR001660) - T[874-932] 4.1E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|
