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  1. Transcript 'KH2012:KH.C12.8.v1.A...'

Transcript Model

Transcript Id

KH2012:KH.C12.8.v1.A.SL3-1

Possible name(s)

DEAF1; SAMD11; SAMD7

Location

KhC12 [3,425,836 / 3,432,659]

Sequences

Amino acid sequence

Length: 728

>KH.C12.8.v1.A.SL3-1
NFVGLYDFLSAFADLNQQEKPGKKRPVGSGSADIVRRNSMSENTAASTGSSTPSSTDSNK
VFGMPDTHGPTTIHKGREGGLNSIISQLHNKKAICGNDVTAGTESLDLSVRCSSSTSPNG
DCERKRQHRPSNSQSESPPMKRRHSDDDDAFPVPNGRDNEHNVRDKDRESSSAEPLCLAS
HGSSKKEKTHSNKTSKKENDVIFDPRRIGSNDHNKSPNGRNHYPDFNDCASNGYRPNLGF
AEYALFDAMKRAVASVSGGSYPDSVSTPPPNRRDVSSPNRGYINLDSTSPRGLTSQNYPQ
SRNQQPMMELVSPHRKNGTSRESYGFGNSVDSRLRNGGLFDAPLPSNKAPVTVLHHRPNS
YSPHRSNPSHTHHYYGMPPPSSSRHSPDGRGARTPRREVPFSAPARFDRKTNTPIKKTPD
HQRSRLHGRSDARGTKMLDLQNHAIPMMSLTYSNKKASRGRQSDSSPPQFSTGSATSNAG
KCVYSDDEVARTSDLNRRLSSSAPPISLPSSKSRKFYTDENNNRSSDDQPSSRQYVFGGG
KRAKSSSPGSPSDAPFFCDDRRSQDPVDPCGFSCGAACQNSFQELRLRELSCAIDQMAEL
SVDGVCEMLEEIGCGEYQEVFRKNCISGDALPLLAEHHLVEMMGLKLGHALKIIAQIHRR
LGNHCFLMTNQLPAFRHASPIDYLCLRKQAATPNGQSDNITTPARVAKEAEIKKVAENEK
VPENTTAE

Nucleotide sequence

Length: 2,822

>KH2012:KH.C12.8.v1.A.SL3-1
AATTTTGTAGGACTGTATGATTTCTTAAGTGCATTTGCCGACTTAAATCAGCAGGAAAAA
CCAGGGAAAAAGCGGCCAGTAGGCTCGGGTTCGGCTGACATTGTTCGGCGAAATTCTATG
TCCGAAAACACAGCCGCTTCTACAGGTTCATCTACCCCGTCTTCCACCGATTCAAATAAA
GTTTTCGGAATGCCAGACACACACGGCCCTACCACCATTCATAAAGGGAGAGAGGGCGGA
CTAAATTCCATCATCTCTCAACTCCACAACAAAAAGGCTATTTGCGGAAATGACGTCACT
GCTGGGACCGAATCTCTTGATCTGAGCGTTCGGTGTTCTTCCTCTACGTCACCGAATGGC
GATTGTGAAAGAAAAAGACAACACCGACCAAGCAACAGTCAGAGTGAAAGCCCTCCAATG
AAAAGAAGACACTCGGACGACGACGATGCTTTTCCAGTGCCCAACGGTAGGGATAATGAG
CATAATGTAAGAGACAAAGACAGGGAAAGTTCTTCTGCTGAACCACTTTGCCTCGCCTCG
CACGGATCTTCTAAGAAGGAAAAAACGCACTCCAATAAAACAAGCAAAAAAGAAAACGAT
GTAATATTCGACCCTCGTCGCATCGGATCTAACGACCACAATAAGTCGCCTAACGGAAGA
AATCATTATCCAGACTTCAACGATTGTGCATCGAACGGTTACCGACCAAACTTGGGCTTT
GCTGAATACGCTTTGTTTGACGCTATGAAACGCGCAGTTGCGAGTGTCTCTGGTGGATCC
TACCCTGACAGTGTTAGTACCCCACCTCCTAACAGAAGAGACGTATCTTCACCTAACAGA
GGCTACATCAATCTTGACTCTACGTCACCACGGGGTCTTACATCTCAAAATTACCCGCAA
TCCCGAAACCAACAGCCTATGATGGAACTAGTGTCTCCCCACCGTAAGAATGGGACGTCT
CGAGAATCCTATGGTTTCGGCAACTCGGTCGACTCTCGGTTACGAAACGGAGGCCTCTTC
GACGCACCGTTGCCAAGTAACAAAGCGCCTGTTACGGTTCTACACCATCGGCCCAACTCC
TATAGCCCCCACAGAAGTAACCCTTCCCATACCCACCATTACTATGGCATGCCACCACCT
TCAAGCAGTCGCCACTCACCCGATGGTAGGGGGGCTCGAACCCCGCGTAGGGAAGTTCCC
TTTTCCGCTCCTGCCCGTTTTGATCGGAAGACGAACACTCCAATAAAAAAGACCCCGGAT
CATCAGAGGTCTCGTCTTCACGGAAGATCGGATGCGAGAGGAACAAAGATGTTAGATCTT
CAGAATCATGCTATACCAATGATGTCGCTGACATACAGCAACAAAAAGGCTTCTCGTGGA
CGTCAATCTGATTCTAGTCCGCCTCAATTCTCTACTGGATCTGCAACTTCAAATGCAGGC
AAATGCGTTTACAGCGACGATGAAGTAGCTCGTACAAGCGACCTCAACAGACGCCTAAGT
TCCAGCGCACCCCCTATATCCCTGCCAAGCTCAAAATCTAGGAAATTTTACACGGACGAA
AATAATAATCGTTCATCTGATGATCAGCCGTCTTCTCGACAATATGTTTTCGGAGGTGGT
AAAAGAGCAAAGTCCTCTTCTCCAGGATCTCCGTCCGATGCTCCCTTTTTCTGCGATGAT
CGCCGCAGCCAAGATCCAGTTGATCCGTGTGGATTTTCTTGCGGAGCTGCATGTCAAAAT
TCTTTCCAAGAGCTGCGCTTACGGGAGCTCTCTTGCGCTATCGATCAAATGGCAGAACTG
TCGGTAGATGGCGTGTGCGAGATGCTTGAAGAGATAGGCTGCGGGGAGTATCAAGAAGTG
TTTCGAAAGAATTGTATTTCTGGCGATGCCTTACCGCTGCTGGCGGAGCACCATCTTGTC
GAAATGATGGGCTTAAAGCTTGGTCATGCCCTGAAGATTATTGCCCAGATACACCGTCGC
CTAGGAAACCATTGTTTCCTGATGACCAATCAGCTTCCTGCGTTTCGCCATGCCTCCCCA
ATCGATTACCTCTGCCTCAGAAAGCAAGCGGCGACACCGAACGGACAGTCGGATAACATT
ACAACGCCGGCAAGAGTCGCTAAAGAGGCTGAAATTAAAAAGGTTGCAGAAAACGAAAAA
GTTCCCGAAAATACTACTGCGGAATGATTTTATTCTGTTGTTGAGGCATGTTCGACTTTA
GAACTTTAATATATCTTGCTAAGAACCTGTATTCCACACTGGAAAAATCCAGTTGTCTAG
CTATTTTGTCAAATTAATTTCATTATATATTTGGGCCACTTAAAAGTAGAAATTTATATC
TTACCTCATGCTTTAAGTGGCTGCGTGTAATTCTGTTTAAAATGTTGTAAATGTTAATTT
ATAATGTGGCACAAGACACGCATATTTCCACATATATAGCTTACTGTGAAAGCGAATCTT
CCATTTCGTATTATAAAGACACGGACCGTCACCGTTTCTTCACAATTTTGTTTCTTCATT
TTTATTTTTCTTCACTCCTAGCCCTACCAATATAACATACCCACGTTATATTGCTGCCTT
ACTGGGCAAATGTAACCAAATCCCTAATACGTTCTCACTGCGGGGTAACTTTTTTAGGTT
ACAATTCATATCCATTAAGCCTATTTTGTAAATACGACTTACATACCCAGGAATACTCTT
CATTTGTTTATTATCAGTTCGCTTTGAAAGTTGTTTACGTTGTGCAATGTTTTCTTTATT
TTTCACGCGTTCCTTTTGTGATCTTCATTCATTTGAGAATAAAATTTTCAAATTTGTAAA
CT

InterProScan

SUPERFAMILY
SAM/pointed_sf (IPR013761) - T[596-661] 5.79E-15
SMART
SAM (IPR001660) - T[597-663] 2.0E-10
ProSiteProfiles
SAM (IPR001660) - T[600-663] 10.584
Pfam
SAM (IPR001660) - T[601-659] 2.8E-13

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value