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  1. Transcript 'KH2012:KH.C1.264.v3....' > 
  2. Transcript 'KH2012:KH.C1.264.v2....' > 
  3. Transcript 'KH2012:KH.C1.264.v1....' > 
  4. Transcript 'KH2012:KH.C1.264.v3....'

Transcript Model

Transcript Id

KH2012:KH.C1.264.v3.A.nonSL7-1

Possible name(s)

YBX1; YBX2; YBX3

Gene model

KH2012:KH.C1.264

Location

KhC1 [3,320,249 / 3,326,393]

Sequences

Amino acid sequence

Length: 277

>KH.C1.264.v3.A.nonSL7-1
RSNIMSEQAGQLEQVTENAPVERKVLASHCSGVVKWFNVRNGYGFVNRDDNKEDVFIHQT
AIIKNNPKKYLRSVGDGENVEFDVVEGEKGLPEAANVTGPNGEPVKGSKYAADRRRYKPR
YKPRPKEIKGEDGENERAEDGDPEQKPEQRRRPRKPRPRRPRREPEEGEAKENGVVADHV
EGEDGEQPQRQRRPRKPRYRPKRSPQDGEAEVNGEVPRENGEEGEQRPARRRRPRNRPKG
PRRPKPTENENGNAVPNGQENADAPVAQSQVPVPKSE

Nucleotide sequence

Length: 1,579

>KH2012:KH.C1.264.v3.A.nonSL7-1
AAGATCTAACATCATGTCGGAGCAGGCCGGGCAGCTCGAACAGGTCACTGAAAATGCCCC
TGTCGAGAGAAAAGTTCTCGCATCCCATTGCTCTGGAGTTGTCAAGTGGTTTAATGTGAG
AAACGGTTACGGTTTCGTTAACCGCGACGACAACAAGGAGGACGTGTTCATTCACCAGAC
CGCCATCATCAAAAACAACCCAAAGAAATATCTTCGAAGTGTTGGTGATGGAGAAAACGT
AGAGTTCGATGTAGTGGAAGGTGAAAAGGGTTTGCCTGAAGCTGCAAATGTAACCGGACC
GAATGGTGAGCCTGTAAAAGGCAGCAAGTATGCTGCTGATAGACGCAGATACAAACCACG
CTACAAACCAAGACCCAAGGAGATAAAAGGGGAGGATGGAGAGAATGAAAGAGCGGAGGA
CGGTGATCCGGAGCAAAAACCAGAACAACGAAGAAGACCACGTAAGCCGAGACCTCGTCG
TCCTCGTAGAGAACCGGAGGAAGGAGAAGCAAAGGAGAATGGAGTGGTTGCTGATCATGT
TGAAGGGGAAGATGGCGAACAACCTCAACGACAACGTAGACCAAGAAAGCCACGTTACCG
ACCAAAACGGTCCCCACAAGACGGGGAAGCTGAGGTAAATGGTGAGGTCCCACGTGAGAA
TGGAGAGGAGGGTGAACAACGGCCAGCTCGTCGCCGACGTCCCCGCAACCGCCCAAAGGG
ACCAAGACGCCCCAAACCCACGGAGAATGAGAACGGCAATGCTGTACCAAATGGACAAGA
GAATGCTGATGCACCTGTCGCGCAGAGCCAGGTTCCAGTACCAAAATCAGAGTAAAAAGC
GCGATCAGCGCTCGGTGGAGGGGTGGTTGTTTCGTCATATTGTTGTAGCGTCAGGACAAT
AATGCTTTTTAAGTTTTCCTTGTGTGCATGGCCACCGTCGCCCTAGCTTGCACCGTAGAT
TTAGTTAACACCCCAACAGCAGCAAGAACCCCTGACCGATAAATACTGCTTCTCTAACAC
CTTCTCGAATTTCTGTAATTGGTCGACCCTGCGCATGCGGTCGCACGACACTGAATGTTT
CCACCACGTAATTTTGAAAATTTAAGCTCAAAGCGCATTAACATCACAAGCATTTTAAAG
CAGCACTTGTGCCTGTAATTCACAGTGCTGATAAAGGTTAACATCTAGTTTATGAAGTAA
ATTCTGTGTCTGAGACGTTTACCACCGGGCCTGTCTCTGCACACGGACTACAATAAAAGG
CCCTTTAACCAGTTATACTTGAATAAGCGTCCACGGAACGCCCCTCGCCCGAAATTTTCA
TCGTTGGTTGTTGTTGTTGGGTTAATATTTAGTTTTCATCTGATACATTTAGTTGTTCAC
ACCAAAACGATAACGTGGCGTTGATTCCGGCCGGGAACACCAAAACGTTACTCGTTATCA
ACTCCACTTGATTGTCGCTGTTGTAACGAGTGCGTTTGCAATCAATATTGCTGTTTTCCT
TTGCTGCTTGTTCAGTTTAATTTAGTTCACTGTAAATTAAATTCGGTTGTTCCCAGCCAA
AATAAACCATACCATTTCA

InterProScan

SUPERFAMILY
NA-bd_OB-fold (IPR012340) - T[28-99] 2.57E-19
Pfam
CSP_DNA-bd (IPR002059) - T[31-99] 5.4E-23
SMART
CSD (IPR011129) - T[31-100] 1.9E-19
PRINTS
CSP_DNA-bd (IPR002059) - T[32-47] 1.4E-19 - T[53-62] 1.4E-19 - T[72-90] 1.4E-19
CDD
CSP_DNA-bd (IPR002059) - T[32-99] 1.90206E-19

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
YBOX1_HUMAN 74.257 % 158 1.67E-46
YBOX3_HUMAN 78.495 % 155 5.18E-45
YBOX2_HUMAN 70.408 % 149 6.9E-43