- Transcript 'KH2012:KH.C1.26.v4.R...'
Transcript Model
Transcript Id
KH2012:KH.C1.26.v4.R.ND6-2
Possible name(s)
ATF1; CREB1; CREM
Gene model
Location
KhC1 [7,314,987 / 7,319,119]
Amino acid sequence
Length: 310
>KH.C1.26.v4.R.ND6-2
DLNPLCSGSFRFSSSKTHFLVITCKMMSMLPHIEEWSGSGETQMVTLPVSMAHAINSAQG
QQTVISSQQSGQPVAQDTAKRRELLSRRPSYRKILNELSGQPDANQRVKDEPGGSKSSES
SESDSGGQMVTPLQAPTIAYQTGSGTVTVHQSPQTIQIPASALNHDQHVTSVAGLQTFSM
ANALAQGQAALVQDSNTSGNTLWMPGNHVVVQGGDSQMYQIRTSTSSNAIPNVVLSGNSM
QSPQQMAEEASRKRELRLMKNREAAKDCRLKKKEYIKCLENRVHVLETQNKALIDELQQL
KEMYCRDELH
Nucleotide sequence
Length: 1,427
>KH2012:KH.C1.26.v4.R.ND6-2
CTGACTTAAATCCTCTATGTTCCGGAAGTTTTAGGTTTAGTAGTAGTAAAACACATTTTT
TAGTGATAACTTGTAAAATGATGAGTATGTTGCCTCATATAGAGGAATGGTCTGGTTCCG
GCGAAACACAGATGGTGACTTTACCAGTGTCAATGGCACATGCAATCAACTCAGCTCAAG
GCCAACAAACAGTCATATCAAGTCAACAATCAGGCCAACCTGTTGCTCAGGATACTGCGA
AGAGGCGAGAACTGCTGTCCAGAAGGCCTTCCTACAGGAAAATTTTAAACGAGTTGTCAG
GACAACCAGATGCAAACCAACGAGTCAAAGATGAACCAGGTGGAAGCAAATCTTCAGAAA
GCTCCGAATCTGACTCCGGTGGTCAAATGGTAACTCCATTACAAGCACCAACCATAGCAT
ACCAAACTGGGAGTGGAACAGTGACTGTCCACCAATCTCCACAAACAATTCAAATACCGG
CCTCTGCTTTAAACCATGATCAACATGTGACCTCCGTGGCTGGTCTTCAAACTTTCTCCA
TGGCCAACGCCCTCGCACAAGGCCAAGCTGCTTTAGTACAAGATTCCAATACCAGCGGAA
ACACCCTGTGGATGCCAGGGAATCATGTTGTGGTACAAGGAGGCGACTCCCAGATGTACC
AAATCCGTACCTCCACTTCATCAAATGCAATTCCTAATGTTGTGTTAAGTGGTAACAGCA
TGCAATCACCTCAGCAGATGGCAGAAGAAGCTTCAAGGAAGCGGGAACTGAGGTTAATGA
AAAACAGAGAAGCGGCCAAGGATTGCAGGTTAAAGAAGAAAGAGTACATTAAGTGCTTAG
AGAACCGTGTCCATGTGCTTGAAACACAAAACAAAGCTCTTATAGATGAGTTGCAACAGT
TAAAGGAGATGTACTGTAGAGATGAATTGCACTGAACAATTTTTAAGCAATCATCCTGAC
GTTGTTTTTCAATTTCTCACATTTGTTGCTTACATAACTGGTTTCATTATTTATTCAGTT
GTACCTGGCCATATTGCTAAATATAACTGAGCTAAGTATTAGCAACAGTGTTGGCAATTA
GCGTGGATATTTAGCGTTCCTTTGTACAGTTTTTAAGCAGTTTTTCACCAGCACAATATT
CAACTGACTAAGCCATGACTAAATAAACTTAATACCCTCTGACAACTCTGGTAACATGCA
AAGAATGTGCATATTAACCTCAACCAACTGAGCACATACAGATTTATTCACACCTCCTGC
AACTGCCTTGTTGCCTTACCAGCTCTGGAATAATACAACATTGCACATGAATGTGGCTGC
ATTTATTTTGCTTATTTAACCAGTTTTAAAAATTCATTTGCCTTGTCGTGTTATGTTATA
GCTCATTTCTGCCTTTCATTCTGTTGTAAATAAACACTAGTAAAACC
| PANTHER |
CREB1 (IPR029802) - T[53-306] 9.6E-52 |
| ProSiteProfiles |
Coactivator_CBP_pKID (IPR003102) - T[58-117] 12.79 |
| Pfam |
Coactivator_CBP_pKID (IPR003102) - T[70-110] 1.9E-19 |
| PRINTS |
Leuzip_CREB (IPR001630) - T[75-97] 1.7E-39 - T[211-222] 1.7E-39 - T[248-264] 1.7E-39 - T[266-286] 1.7E-39 - T[286-303] 1.7E-39 |
| SMART |
bZIP (IPR004827) - T[249-310] 3.4E-6 |
| Pfam |
bZIP (IPR004827) - T[249-304] 6.4E-19 |
| ProSiteProfiles |
bZIP (IPR004827) - T[251-302] 10.978 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ATF1_HUMAN | 42.918 % | 155 | 1.14E-45 |
| CREM_HUMAN | 45.418 % | 168 | 1.34E-49 |
| CREB1_HUMAN | 48.718 % | 189 | 3.66E-58 |