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TRANSCRIPT CARD

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  1. Transcript 'Boschl.CG.Botznik201...' > 
  2. Transcript 'KH2012:KH.C5.42.v3.A...' > 
  3. Transcript 'Cisavi.CG.ENS81.R488...' > 
  4. Transcript 'KH2012:KH.C12.537.v1...'

Transcript Model

Transcript Id

KH2012:KH.C12.537.v1.A.SL3-1

Possible name(s)

SAMD8; SGMS1; SGMS2

Gene model

KH2012:KH.C12.537

Location

KhC12 [164,630 / 172,039]

Sequences

Amino acid sequence

Length: 416

>KH.C12.537.v1.A.SL3-1
NKLRVMYIHEWGCEEVKVWLKSEGFEKYSELLCEKHEVDGDVLLSLTEKDLRNPPLQFKK
LSDIKKLWRCLKLLQQKSKIERRVLNGVSHHKRSQIYTTTTNNNHHSDDGRGSSYDETDH
SSYIDSDIEVSMRSRGKDVAFLPELNKLFVSFLYATFVSWVTAYMMVLVHERVPDKQKYP
PLPDIFLDNVPLIPYAFQLAELCGLSLAIVWLFILFFHKHRMILLRRFFSIASSVFLLRS
VTIIVTSLSVPGQHLQCSAMYHSAWQRFVRATEIVAGFGMTLTGVHTCGDYMFSGHTAYL
TLFNHLITEYTPSKYYRLHTFSWVLNLFGIFFVLAAHEHYSIDVVIAFYITSRIFLYYHM
LANTRCYWYSKRVKIWFPLLSYFECNVPGKIPNEYCWPVTRSDVKRWIQPLYKKNK

Nucleotide sequence

Length: 2,170

>KH2012:KH.C12.537.v1.A.SL3-1
GTGTTGTGGATACTAGGATAAACTTACGAATGAAATAAGTTAAGGGTCATGTATATTCAC
GAGTGGGGTTGCGAGGAAGTAAAAGTTTGGTTGAAATCTGAGGGTTTTGAAAAATATTCT
GAGTTGCTTTGTGAGAAGCATGAGGTGGATGGAGACGTTTTGTTGTCGTTGACTGAAAAA
GATCTCCGGAATCCTCCTTTGCAATTCAAGAAGTTAAGCGACATAAAGAAATTGTGGCGA
TGTTTGAAACTTTTGCAACAAAAAAGTAAAATTGAGCGTCGTGTATTAAATGGAGTGTCT
CACCACAAGAGGAGCCAGATATACACAACAACCACCAACAACAACCATCATAGCGACGAT
GGTAGGGGTTCAAGTTACGACGAGACGGATCATTCTTCGTACATTGATAGCGACATAGAG
GTCTCTATGAGGTCACGGGGCAAAGATGTCGCCTTCTTACCAGAACTCAATAAATTGTTT
GTGAGCTTTCTATACGCGACCTTTGTGTCGTGGGTCACCGCATACATGATGGTTCTCGTG
CATGAGCGAGTACCCGACAAACAGAAGTACCCCCCTCTCCCCGACATTTTCCTCGATAAC
GTCCCGTTGATCCCGTACGCTTTCCAACTTGCCGAGTTATGCGGGCTCTCCCTTGCCATC
GTGTGGCTGTTCATTCTGTTCTTCCATAAACACAGAATGATCCTTCTGCGTCGTTTCTTC
AGCATCGCGAGCTCCGTTTTTCTCCTAAGGTCCGTCACCATCATTGTGACATCACTGTCG
GTACCGGGGCAACATTTACAATGTTCAGCGATGTATCACTCAGCATGGCAGCGGTTCGTG
CGCGCGACTGAAATTGTAGCTGGGTTCGGTATGACACTCACTGGTGTACATACTTGTGGT
GATTATATGTTTAGTGGTCACACAGCGTACTTAACTTTGTTCAATCATCTTATTACTGAA
TACACCCCAAGTAAATATTATCGTCTTCATACATTTTCCTGGGTTCTTAATTTGTTTGGA
ATATTCTTTGTGCTCGCTGCTCATGAACATTATTCCATTGACGTAGTGATTGCATTCTAC
ATAACATCGAGAATATTCTTATATTACCACATGCTCGCCAACACAAGGTGTTATTGGTAC
AGCAAACGTGTAAAGATTTGGTTTCCATTGCTTTCATACTTTGAATGCAACGTACCCGGG
AAGATTCCTAATGAATATTGTTGGCCTGTTACAAGGTCGGATGTTAAAAGGTGGATTCAA
CCTTTGTATAAAAAGAACAAGTGAAACAACCATGGTGTAATTACATGCATTGATTTAGAT
TAATTTCGAAGAATTTTCTTCGATATTGGTAACTGCTGTTTAAATAGTACAACAGGCTTA
AGTAAGACTTTGAATTGTGATGATATTTCACAGGTTGCGGCCTACACATGTTTTGTACGA
GTTTTTGACCTATTTTAGTAAAAACTGTTTGATTGCGTAATACTCAAAATTGTGGGTGTT
TGTATATAATATGATTTTCTGTTAACTCTGCCACCAGGCAAAATGCAAAAGAATCTTTTT
CAGTTCATCTGGTACAAAAGCATTAATTTTATCTCAATGCGAAACTTTTATTTAGTAAGA
TCTATCAGGAAACATGACGCTAAGTATTAAATATCACTAAAATAAATATCAATATAAAGT
TTATACCAAATGAGGCGAAAAACTATTGCATTTTATAACACGTTGTAATTACAGTTAAAA
CTACAGTATAAGACCAAGCATATGTTTTGTAACTTAGTGGAAAGAAACCGCTTATTTTTA
ATTTTTATTTGCCTTATATTCATTGAGATTGTCTGTGTTAAAAGATTGTTCTGTAAATTG
CAACAAATAAGAAAAGGTCGTGTTAAAACACAAACAGCATACCAAACATTTGGATAAAGA
GCAAACAATATACCACCATGTTAATTGATTATTTGCAATGTTTCACTTTTCCTTTAAAAC
CATTACACTGCTTATGCTTTACACTAAACATGGCAACACTGTAAATTGATAATGTCCTAT
TTGTCATCACATGGTTTCTACATTACAGGGAAAAATATAATATTAAATTTGTTTTCAGTA
TAATGCTTGTAATTTAATTCAGTGTTAAGTGATTATGTTTTGTGTTTGCAATAAATGTAA
GGATAAACTC

InterProScan

SMART
SAM (IPR001660) - T[8-77] 1.7E-5
SUPERFAMILY
SAM/pointed_sf (IPR013761) - T[8-77] 5.86E-15
Pfam
SAM (IPR001660) - T[10-72] 1.9E-10
ProSiteProfiles
SAM (IPR001660) - T[11-77] 12.718
Pfam
Sphingomyelin_synth-like_dom (IPR025749) - T[287-360] 4.1E-25

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SMS1_HUMAN 33.501 % 228 5.89E-71
SMS2_HUMAN 35.976 % 212 4.3E-65
SAMD8_HUMAN 52.913 % 427 2.69E-148