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  1. Transcript 'KH2012:KH.C12.537.v1...'

Transcript Model

Transcript Id

KH2012:KH.C12.537.v1.A.SL2-1

Possible name(s)

SAMD8; SGMS1; SGMS2

Gene model

KH2012:KH.C12.537

Location

KhC12 [164,669 / 172,039]

Sequences

Amino acid sequence

Length: 414

>KH.C12.537.v1.A.SL2-1
LRVMYIHEWGCEEVKVWLKSEGFEKYSELLCEKHEVDGDVLLSLTEKDLRNPPLQFKKLS
DIKKLWRCLKLLQQKSKIERRVLNGVSHHKRSQIYTTTTNNNHHSDDGRGSSYDETDHSS
YIDSDIEVSMRSRGKDVAFLPELNKLFVSFLYATFVSWVTAYMMVLVHERVPDKQKYPPL
PDIFLDNVPLIPYAFQLAELCGLSLAIVWLFILFFHKHRMILLRRFFSIASSVFLLRSVT
IIVTSLSVPGQHLQCSAMYHSAWQRFVRATEIVAGFGMTLTGVHTCGDYMFSGHTAYLTL
FNHLITEYTPSKYYRLHTFSWVLNLFGIFFVLAAHEHYSIDVVIAFYITSRIFLYYHMLA
NTRCYWYSKRVKIWFPLLSYFECNVPGKIPNEYCWPVTRSDVKRWIQPLYKKNK

Nucleotide sequence

Length: 2,131

>KH2012:KH.C12.537.v1.A.SL2-1
TTAAGGGTCATGTATATTCACGAGTGGGGTTGCGAGGAAGTAAAAGTTTGGTTGAAATCT
GAGGGTTTTGAAAAATATTCTGAGTTGCTTTGTGAGAAGCATGAGGTGGATGGAGACGTT
TTGTTGTCGTTGACTGAAAAAGATCTCCGGAATCCTCCTTTGCAATTCAAGAAGTTAAGC
GACATAAAGAAATTGTGGCGATGTTTGAAACTTTTGCAACAAAAAAGTAAAATTGAGCGT
CGTGTATTAAATGGAGTGTCTCACCACAAGAGGAGCCAGATATACACAACAACCACCAAC
AACAACCATCATAGCGACGATGGTAGGGGTTCAAGTTACGACGAGACGGATCATTCTTCG
TACATTGATAGCGACATAGAGGTCTCTATGAGGTCACGGGGCAAAGATGTCGCCTTCTTA
CCAGAACTCAATAAATTGTTTGTGAGCTTTCTATACGCGACCTTTGTGTCGTGGGTCACC
GCATACATGATGGTTCTCGTGCATGAGCGAGTACCCGACAAACAGAAGTACCCCCCTCTC
CCCGACATTTTCCTCGATAACGTCCCGTTGATCCCGTACGCTTTCCAACTTGCCGAGTTA
TGCGGGCTCTCCCTTGCCATCGTGTGGCTGTTCATTCTGTTCTTCCATAAACACAGAATG
ATCCTTCTGCGTCGTTTCTTCAGCATCGCGAGCTCCGTTTTTCTCCTAAGGTCCGTCACC
ATCATTGTGACATCACTGTCGGTACCGGGGCAACATTTACAATGTTCAGCGATGTATCAC
TCAGCATGGCAGCGGTTCGTGCGCGCGACTGAAATTGTAGCTGGGTTCGGTATGACACTC
ACTGGTGTACATACTTGTGGTGATTATATGTTTAGTGGTCACACAGCGTACTTAACTTTG
TTCAATCATCTTATTACTGAATACACCCCAAGTAAATATTATCGTCTTCATACATTTTCC
TGGGTTCTTAATTTGTTTGGAATATTCTTTGTGCTCGCTGCTCATGAACATTATTCCATT
GACGTAGTGATTGCATTCTACATAACATCGAGAATATTCTTATATTACCACATGCTCGCC
AACACAAGGTGTTATTGGTACAGCAAACGTGTAAAGATTTGGTTTCCATTGCTTTCATAC
TTTGAATGCAACGTACCCGGGAAGATTCCTAATGAATATTGTTGGCCTGTTACAAGGTCG
GATGTTAAAAGGTGGATTCAACCTTTGTATAAAAAGAACAAGTGAAACAACCATGGTGTA
ATTACATGCATTGATTTAGATTAATTTCGAAGAATTTTCTTCGATATTGGTAACTGCTGT
TTAAATAGTACAACAGGCTTAAGTAAGACTTTGAATTGTGATGATATTTCACAGGTTGCG
GCCTACACATGTTTTGTACGAGTTTTTGACCTATTTTAGTAAAAACTGTTTGATTGCGTA
ATACTCAAAATTGTGGGTGTTTGTATATAATATGATTTTCTGTTAACTCTGCCACCAGGC
AAAATGCAAAAGAATCTTTTTCAGTTCATCTGGTACAAAAGCATTAATTTTATCTCAATG
CGAAACTTTTATTTAGTAAGATCTATCAGGAAACATGACGCTAAGTATTAAATATCACTA
AAATAAATATCAATATAAAGTTTATACCAAATGAGGCGAAAAACTATTGCATTTTATAAC
ACGTTGTAATTACAGTTAAAACTACAGTATAAGACCAAGCATATGTTTTGTAACTTAGTG
GAAAGAAACCGCTTATTTTTAATTTTTATTTGCCTTATATTCATTGAGATTGTCTGTGTT
AAAAGATTGTTCTGTAAATTGCAACAAATAAGAAAAGGTCGTGTTAAAACACAAACAGCA
TACCAAACATTTGGATAAAGAGCAAACAATATACCACCATGTTAATTGATTATTTGCAAT
GTTTCACTTTTCCTTTAAAACCATTACACTGCTTATGCTTTACACTAAACATGGCAACAC
TGTAAATTGATAATGTCCTATTTGTCATCACATGGTTTCTACATTACAGGGAAAAATATA
ATATTAAATTTGTTTTCAGTATAATGCTTGTAATTTAATTCAGTGTTAAGTGATTATGTT
TTGTGTTTGCAATAAATGTAAGGATAAACTC

InterProScan

SUPERFAMILY
SAM/pointed_sf (IPR013761) - T[6-75] 6.0E-15
SMART
SAM (IPR001660) - T[6-75] 1.7E-5
Pfam
SAM (IPR001660) - T[8-70] 1.9E-10
ProSiteProfiles
SAM (IPR001660) - T[9-75] 12.718
Pfam
Sphingomyelin_synth-like_dom (IPR025749) - T[285-358] 4.1E-25

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SMS1_HUMAN 33.501 % 228 5.49E-71
SMS2_HUMAN 35.976 % 212 4.52E-65
SAMD8_HUMAN 52.913 % 426 3.15E-148