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  1. Transcript 'KH2012:KH.C12.537.v1...'

Transcript Model

Transcript Id

KH2012:KH.C12.537.v1.A.ND1-1

Possible name(s)

SAMD8; SGMS1; SGMS2

Gene model

KH2012:KH.C12.537

Location

KhC12 [164,625 / 172,039]

Sequences

Amino acid sequence

Length: 416

>KH.C12.537.v1.A.ND1-1
NKLRVMYIHEWGCEEVKVWLKSEGFEKYSELLCEKHEVDGDVLLSLTEKDLRNPPLQFKK
LSDIKKLWRCLKLLQQKSKIERRVLNGVSHHKRSQIYTTTTNNNHHSDDGRGSSYDETDH
SSYIDSDIEVSMRSRGKDVAFLPELNKLFVSFLYATFVSWVTAYMMVLVHERVPDKQKYP
PLPDIFLDNVPLIPYAFQLAELCGLSLAIVWLFILFFHKHRMILLRRFFSIASSVFLLRS
VTIIVTSLSVPGQHLQCSAMYHSAWQRFVRATEIVAGFGMTLTGVHTCGDYMFSGHTAYL
TLFNHLITEYTPSKYYRLHTFSWVLNLFGIFFVLAAHEHYSIDVVIAFYITSRIFLYYHM
LANTRCYWYSKRVKIWFPLLSYFECNVPGKIPNEYCWPVTRSDVKRWIQPLYKKNK

Nucleotide sequence

Length: 2,175

>KH2012:KH.C12.537.v1.A.ND1-1
TTTAGGTGTTGTGGATACTAGGATAAACTTACGAATGAAATAAGTTAAGGGTCATGTATA
TTCACGAGTGGGGTTGCGAGGAAGTAAAAGTTTGGTTGAAATCTGAGGGTTTTGAAAAAT
ATTCTGAGTTGCTTTGTGAGAAGCATGAGGTGGATGGAGACGTTTTGTTGTCGTTGACTG
AAAAAGATCTCCGGAATCCTCCTTTGCAATTCAAGAAGTTAAGCGACATAAAGAAATTGT
GGCGATGTTTGAAACTTTTGCAACAAAAAAGTAAAATTGAGCGTCGTGTATTAAATGGAG
TGTCTCACCACAAGAGGAGCCAGATATACACAACAACCACCAACAACAACCATCATAGCG
ACGATGGTAGGGGTTCAAGTTACGACGAGACGGATCATTCTTCGTACATTGATAGCGACA
TAGAGGTCTCTATGAGGTCACGGGGCAAAGATGTCGCCTTCTTACCAGAACTCAATAAAT
TGTTTGTGAGCTTTCTATACGCGACCTTTGTGTCGTGGGTCACCGCATACATGATGGTTC
TCGTGCATGAGCGAGTACCCGACAAACAGAAGTACCCCCCTCTCCCCGACATTTTCCTCG
ATAACGTCCCGTTGATCCCGTACGCTTTCCAACTTGCCGAGTTATGCGGGCTCTCCCTTG
CCATCGTGTGGCTGTTCATTCTGTTCTTCCATAAACACAGAATGATCCTTCTGCGTCGTT
TCTTCAGCATCGCGAGCTCCGTTTTTCTCCTAAGGTCCGTCACCATCATTGTGACATCAC
TGTCGGTACCGGGGCAACATTTACAATGTTCAGCGATGTATCACTCAGCATGGCAGCGGT
TCGTGCGCGCGACTGAAATTGTAGCTGGGTTCGGTATGACACTCACTGGTGTACATACTT
GTGGTGATTATATGTTTAGTGGTCACACAGCGTACTTAACTTTGTTCAATCATCTTATTA
CTGAATACACCCCAAGTAAATATTATCGTCTTCATACATTTTCCTGGGTTCTTAATTTGT
TTGGAATATTCTTTGTGCTCGCTGCTCATGAACATTATTCCATTGACGTAGTGATTGCAT
TCTACATAACATCGAGAATATTCTTATATTACCACATGCTCGCCAACACAAGGTGTTATT
GGTACAGCAAACGTGTAAAGATTTGGTTTCCATTGCTTTCATACTTTGAATGCAACGTAC
CCGGGAAGATTCCTAATGAATATTGTTGGCCTGTTACAAGGTCGGATGTTAAAAGGTGGA
TTCAACCTTTGTATAAAAAGAACAAGTGAAACAACCATGGTGTAATTACATGCATTGATT
TAGATTAATTTCGAAGAATTTTCTTCGATATTGGTAACTGCTGTTTAAATAGTACAACAG
GCTTAAGTAAGACTTTGAATTGTGATGATATTTCACAGGTTGCGGCCTACACATGTTTTG
TACGAGTTTTTGACCTATTTTAGTAAAAACTGTTTGATTGCGTAATACTCAAAATTGTGG
GTGTTTGTATATAATATGATTTTCTGTTAACTCTGCCACCAGGCAAAATGCAAAAGAATC
TTTTTCAGTTCATCTGGTACAAAAGCATTAATTTTATCTCAATGCGAAACTTTTATTTAG
TAAGATCTATCAGGAAACATGACGCTAAGTATTAAATATCACTAAAATAAATATCAATAT
AAAGTTTATACCAAATGAGGCGAAAAACTATTGCATTTTATAACACGTTGTAATTACAGT
TAAAACTACAGTATAAGACCAAGCATATGTTTTGTAACTTAGTGGAAAGAAACCGCTTAT
TTTTAATTTTTATTTGCCTTATATTCATTGAGATTGTCTGTGTTAAAAGATTGTTCTGTA
AATTGCAACAAATAAGAAAAGGTCGTGTTAAAACACAAACAGCATACCAAACATTTGGAT
AAAGAGCAAACAATATACCACCATGTTAATTGATTATTTGCAATGTTTCACTTTTCCTTT
AAAACCATTACACTGCTTATGCTTTACACTAAACATGGCAACACTGTAAATTGATAATGT
CCTATTTGTCATCACATGGTTTCTACATTACAGGGAAAAATATAATATTAAATTTGTTTT
CAGTATAATGCTTGTAATTTAATTCAGTGTTAAGTGATTATGTTTTGTGTTTGCAATAAA
TGTAAGGATAAACTC

InterProScan

SMART
SAM (IPR001660) - T[8-77] 1.7E-5
SUPERFAMILY
SAM/pointed_sf (IPR013761) - T[8-77] 5.86E-15
Pfam
SAM (IPR001660) - T[10-72] 1.9E-10
ProSiteProfiles
SAM (IPR001660) - T[11-77] 12.718
Pfam
Sphingomyelin_synth-like_dom (IPR025749) - T[287-360] 4.1E-25

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SMS1_HUMAN 33.501 % 228 5.89E-71
SMS2_HUMAN 35.976 % 212 4.3E-65
SAMD8_HUMAN 52.913 % 427 2.69E-148