- Transcript 'KH2012:KH.C12.47.v2....'
Transcript Model
Transcript Id
KH2012:KH.C12.47.v2.A.nonSL20-1
Possible name(s)
PDHA1; PDHA2; RPS18
Gene model
Location
KhC12 [1,592,204 / 1,597,310]
Amino acid sequence
Length: 469
>KH.C12.47.v2.A.nonSL20-1
CKKADVDLTKRAGELSDDEIDRIVTIMQNPRQYKIPDWFLNRQKDVRDGKFGQILSNQLD
NKLREDIERLKKIRAHRGLRHYWGLRVRGQHTKTTGRRGRTPLGVRTYSVEATFPIKPID
THKLENTPATEVQINKDDAISYYTKMQIIRRMELKADQLYKQKIIRGFCHLYDGQEACCA
GIEASLTPKDDVITAYRAHGWAYIRGVPVCNILAELFGRKLGCAKGKGGSMHMYSKNFYG
GNGIVGAQVPLGAGIAFAHKYRNSDTVTVACYGDGAANQGQIFESFNMSQLWKLPAIFVC
ENNRYGMGTSVERASASTDYFTRGDYIPGLRVDGMDVLAVREATRFAKEHAVKEGPILME
LVTYRYHGHSMSDPGTSYRTRDEVKEIRQNLDPIMNFREKIISAGFVTKQDVATIDAEVK
QHVENETAKALASTEPDFDQIACDIYVTDTPLSIRSCNIYNQLHHQPSV
Nucleotide sequence
Length: 1,902
>KH2012:KH.C12.47.v2.A.nonSL20-1
TGTGCAAAAAAGCCGACGTTGATCTTACGAAACGCGCCGGGGAGCTTTCCGATGATGAGA
TTGATCGCATCGTCACGATCATGCAAAACCCTCGCCAGTACAAGATTCCCGACTGGTTTT
TGAATAGACAAAAGGATGTTCGTGATGGCAAGTTTGGTCAAATTCTTTCCAACCAGCTTG
ACAACAAACTTCGTGAAGACATCGAACGTTTGAAGAAGATTCGTGCTCACAGGGGTTTGC
GACACTACTGGGGCCTCCGTGTTCGAGGCCAACACACCAAAACCACAGGACGGCGTGGTC
GAACTCCCTTGGGTGTTCGAACTTATTCTGTGGAAGCAACATTTCCCATCAAACCAATTG
ACACACACAAGCTTGAAAACACACCTGCAACTGAAGTACAGATCAACAAAGATGATGCAA
TATCTTACTACACGAAAATGCAAATTATTCGTCGAATGGAGCTGAAAGCTGATCAACTGT
ACAAACAAAAAATAATTCGAGGATTCTGTCATTTGTATGATGGGCAGGAAGCTTGTTGTG
CTGGTATTGAGGCATCACTGACTCCAAAGGACGATGTGATCACTGCATATCGTGCTCATG
GCTGGGCTTACATCAGGGGTGTACCTGTTTGCAACATTCTAGCTGAACTATTTGGTCGAA
AGCTTGGCTGTGCTAAAGGCAAGGGAGGTTCCATGCATATGTACAGCAAGAATTTCTATG
GCGGCAATGGTATTGTTGGTGCACAAGTACCACTTGGTGCAGGAATTGCATTCGCCCACA
AATACAGAAACAGTGACACAGTAACCGTTGCATGTTATGGAGATGGAGCAGCTAACCAGG
GTCAAATATTTGAATCATTCAACATGTCACAACTGTGGAAGCTGCCTGCTATATTTGTAT
GCGAGAACAACCGCTATGGTATGGGCACATCAGTGGAAAGGGCATCAGCAAGTACAGATT
ATTTTACTCGAGGCGATTACATTCCTGGTTTAAGAGTTGATGGAATGGATGTTCTTGCTG
TACGTGAAGCAACGAGGTTTGCAAAGGAACATGCAGTTAAAGAGGGCCCAATATTGATGG
AACTTGTTACATACAGATATCATGGACACAGCATGAGTGACCCTGGTACAAGTTATCGTA
CGCGAGATGAAGTCAAAGAAATTCGACAGAATTTGGATCCGATTATGAATTTCCGTGAAA
AGATAATTTCTGCAGGTTTCGTTACCAAACAAGACGTTGCGACAATCGATGCTGAAGTGA
AACAACATGTTGAAAACGAAACTGCAAAAGCTCTTGCCTCAACTGAGCCGGATTTTGATC
AAATTGCTTGCGACATTTATGTCACTGACACCCCCCTTTCTATCCGATCCTGCAACATTT
ACAACCAGCTACACCACCAGCCATCTGTCTAAATATTCTGTTTGCACCATTTTCGTTTAC
CTTTCTCTTATATTTTTCAAACTAAAAATTCTAATATATATATAAATCTCGTATTGCAGG
TTGAATTAAGACCGTGATACATTAAATTATCATAAAGATGTTTATGCTTTAGTAGTAAAG
AGGTTAGTACTGTACAAAGGTAGAAAGATATTTATATTATTCCTTCCAATGTGCAACACT
GTTTTACGCGAAAGTGTTCCGGAATCTTTCAGTTCGCTGTCTTCCTGCTTGGTTGGTGAA
GTTTATTAGTCGAATACCTCGTAACCGAACCGTTGGATGATCGACGTTGGTACATGTATA
AATGATTTGACGTCCTGTTCAGCAATGCACTTACTATATTGCATCGGCCCAATAGTTTTG
TACAGAGAATGATCATCTGAAGTTGCAGAGGTATTAGCTCTCTAGCGTACGCTTCCGTTT
CGCGATAACTTGCTTCAACCGTATGGTTCTTTCTGGGTTGTC
| Pfam |
Ribosomal_S13 (IPR001892) - T[1-98] 4.2E-40 |
| ProSiteProfiles |
Ribosomal_S13 (IPR001892) - T[1-101] 25.73 |
| SUPERFAMILY |
Ribosomal_S13-like_H2TH (IPR010979) - T[1-101] 5.49E-24 |
| Gene3D |
30s_Rbsml_prot_S13_C (IPR027437) - T[48-95] 1.6E-26 |
| ProSitePatterns |
Ribosomal_S13_CS (IPR018269) - T[77-90] . |
| SUPERFAMILY |
THDP-binding (IPR029061) - T[128-460] 3.68E-101 |
| TIGRFAM |
Pyrv_DH_E1_asu_subgrp-y (IPR017597) - T[137-446] 1.0E-128 |
| Pfam |
DH_E1 (IPR001017) - T[145-436] 5.1E-116 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ODPAT_HUMAN | 57.222 % | 444 | 1.3E-154 |
| ODPA_HUMAN | 61.111 % | 451 | 1.53E-157 |
| RS18_HUMAN | 83.168 % | 191 | 3.18E-59 |