- Transcript 'Cisavi.CG.ENS81.R26....' >
- Transcript 'KH2012:KH.C12.47.v2....'
Transcript Model
Transcript Id
KH2012:KH.C12.47.v2.A.nonSL17-1
Possible name(s)
PDHA1; PDHA2; RPS18
Gene model
Location
KhC12 [1,592,183 / 1,597,310]
Amino acid sequence
Length: 476
>KH.C12.47.v2.A.nonSL17-1
RRFSTLVCKKADVDLTKRAGELSDDEIDRIVTIMQNPRQYKIPDWFLNRQKDVRDGKFGQ
ILSNQLDNKLREDIERLKKIRAHRGLRHYWGLRVRGQHTKTTGRRGRTPLGVRTYSVEAT
FPIKPIDTHKLENTPATEVQINKDDAISYYTKMQIIRRMELKADQLYKQKIIRGFCHLYD
GQEACCAGIEASLTPKDDVITAYRAHGWAYIRGVPVCNILAELFGRKLGCAKGKGGSMHM
YSKNFYGGNGIVGAQVPLGAGIAFAHKYRNSDTVTVACYGDGAANQGQIFESFNMSQLWK
LPAIFVCENNRYGMGTSVERASASTDYFTRGDYIPGLRVDGMDVLAVREATRFAKEHAVK
EGPILMELVTYRYHGHSMSDPGTSYRTRDEVKEIRQNLDPIMNFREKIISAGFVTKQDVA
TIDAEVKQHVENETAKALASTEPDFDQIACDIYVTDTPLSIRSCNIYNQLHHQPSV
Nucleotide sequence
Length: 1,923
>KH2012:KH.C12.47.v2.A.nonSL17-1
GCCGCAGGTTTAGCACTCTGGTGTGCAAAAAAGCCGACGTTGATCTTACGAAACGCGCCG
GGGAGCTTTCCGATGATGAGATTGATCGCATCGTCACGATCATGCAAAACCCTCGCCAGT
ACAAGATTCCCGACTGGTTTTTGAATAGACAAAAGGATGTTCGTGATGGCAAGTTTGGTC
AAATTCTTTCCAACCAGCTTGACAACAAACTTCGTGAAGACATCGAACGTTTGAAGAAGA
TTCGTGCTCACAGGGGTTTGCGACACTACTGGGGCCTCCGTGTTCGAGGCCAACACACCA
AAACCACAGGACGGCGTGGTCGAACTCCCTTGGGTGTTCGAACTTATTCTGTGGAAGCAA
CATTTCCCATCAAACCAATTGACACACACAAGCTTGAAAACACACCTGCAACTGAAGTAC
AGATCAACAAAGATGATGCAATATCTTACTACACGAAAATGCAAATTATTCGTCGAATGG
AGCTGAAAGCTGATCAACTGTACAAACAAAAAATAATTCGAGGATTCTGTCATTTGTATG
ATGGGCAGGAAGCTTGTTGTGCTGGTATTGAGGCATCACTGACTCCAAAGGACGATGTGA
TCACTGCATATCGTGCTCATGGCTGGGCTTACATCAGGGGTGTACCTGTTTGCAACATTC
TAGCTGAACTATTTGGTCGAAAGCTTGGCTGTGCTAAAGGCAAGGGAGGTTCCATGCATA
TGTACAGCAAGAATTTCTATGGCGGCAATGGTATTGTTGGTGCACAAGTACCACTTGGTG
CAGGAATTGCATTCGCCCACAAATACAGAAACAGTGACACAGTAACCGTTGCATGTTATG
GAGATGGAGCAGCTAACCAGGGTCAAATATTTGAATCATTCAACATGTCACAACTGTGGA
AGCTGCCTGCTATATTTGTATGCGAGAACAACCGCTATGGTATGGGCACATCAGTGGAAA
GGGCATCAGCAAGTACAGATTATTTTACTCGAGGCGATTACATTCCTGGTTTAAGAGTTG
ATGGAATGGATGTTCTTGCTGTACGTGAAGCAACGAGGTTTGCAAAGGAACATGCAGTTA
AAGAGGGCCCAATATTGATGGAACTTGTTACATACAGATATCATGGACACAGCATGAGTG
ACCCTGGTACAAGTTATCGTACGCGAGATGAAGTCAAAGAAATTCGACAGAATTTGGATC
CGATTATGAATTTCCGTGAAAAGATAATTTCTGCAGGTTTCGTTACCAAACAAGACGTTG
CGACAATCGATGCTGAAGTGAAACAACATGTTGAAAACGAAACTGCAAAAGCTCTTGCCT
CAACTGAGCCGGATTTTGATCAAATTGCTTGCGACATTTATGTCACTGACACCCCCCTTT
CTATCCGATCCTGCAACATTTACAACCAGCTACACCACCAGCCATCTGTCTAAATATTCT
GTTTGCACCATTTTCGTTTACCTTTCTCTTATATTTTTCAAACTAAAAATTCTAATATAT
ATATAAATCTCGTATTGCAGGTTGAATTAAGACCGTGATACATTAAATTATCATAAAGAT
GTTTATGCTTTAGTAGTAAAGAGGTTAGTACTGTACAAAGGTAGAAAGATATTTATATTA
TTCCTTCCAATGTGCAACACTGTTTTACGCGAAAGTGTTCCGGAATCTTTCAGTTCGCTG
TCTTCCTGCTTGGTTGGTGAAGTTTATTAGTCGAATACCTCGTAACCGAACCGTTGGATG
ATCGACGTTGGTACATGTATAAATGATTTGACGTCCTGTTCAGCAATGCACTTACTATAT
TGCATCGGCCCAATAGTTTTGTACAGAGAATGATCATCTGAAGTTGCAGAGGTATTAGCT
CTCTAGCGTACGCTTCCGTTTCGCGATAACTTGCTTCAACCGTATGGTTCTTTCTGGGTT
GTC
| ProSiteProfiles |
Ribosomal_S13 (IPR001892) - T[1-108] 26.745 |
| Pfam |
Ribosomal_S13 (IPR001892) - T[2-105] 5.0E-42 |
| SUPERFAMILY |
Ribosomal_S13-like_H2TH (IPR010979) - T[2-108] 1.53E-25 |
| Gene3D |
30s_Rbsml_prot_S13_C (IPR027437) - T[55-102] 1.6E-26 |
| ProSitePatterns |
Ribosomal_S13_CS (IPR018269) - T[84-97] . |
| SUPERFAMILY |
THDP-binding (IPR029061) - T[135-467] 3.93E-101 |
| TIGRFAM |
Pyrv_DH_E1_asu_subgrp-y (IPR017597) - T[144-453] 1.1E-128 |
| Pfam |
DH_E1 (IPR001017) - T[152-443] 5.3E-116 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ODPAT_HUMAN | 57.222 % | 443 | 2.24E-154 |
| ODPA_HUMAN | 61.111 % | 451 | 1.8E-157 |
| RS18_HUMAN | 80.556 % | 198 | 8.6E-62 |