Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C12.455.v1.A.nonSL2-1

Possible name(s)

UBE2D1; UBE2D2; UBE2D4

Gene model

KH2012:KH.C12.455

Location

KhC12 [3,884,295 / 3,886,434]

Sequences

Amino acid sequence

Length: 153

>KH.C12.455.v1.A.nonSL2-1
YIYIKMALKRITKELQDLNRDPPSHCSAGPVGEDYFHWQATITGPCETPFSGGVFFLSIH
FPTDYPFKPPKVSFITKIYHPNINANGSICLDILRSQWSPALTVAKVLLSISSLLSDPNP
DDPLVPEIAKLYKTDRAKYCKTAQEWTRRYCVE

Nucleotide sequence

Length: 836

>KH2012:KH.C12.455.v1.A.nonSL2-1
AGAAACAGAGGATTCTAGGGAATCTATAGGAAAAGAACTGATATATATATATTAAAATGG
CTTTAAAACGAATTACAAAGGAGCTTCAGGACTTAAATCGCGACCCACCATCACACTGTA
GTGCGGGCCCTGTTGGTGAAGACTATTTTCATTGGCAAGCCACAATTACCGGTCCATGTG
AGACTCCATTTTCAGGAGGGGTATTTTTTCTTAGCATACACTTTCCTACAGATTATCCAT
TTAAACCACCAAAGGTTTCCTTTATAACTAAAATCTATCACCCCAACATAAATGCAAATG
GAAGCATTTGTCTTGATATCCTGCGCTCACAATGGTCACCAGCTTTAACAGTAGCCAAAG
TACTGCTTTCAATAAGTTCACTTTTGAGTGACCCTAATCCTGATGACCCACTAGTACCAG
AAATAGCCAAGTTGTATAAAACAGACCGAGCGAAATATTGTAAAACTGCACAAGAATGGA
CAAGGCGTTACTGTGTGGAGTAAAACATCAGTCCGAAGTTAATTGCAAGTGCAAAATTTT
GTTTTTGACTATGTGATGTTGTTTTGTACATATAGTAATATAGACTTACCAGTCTTTCAA
TGAATTTAACTTAATCTATTTACCCTTAAGTGTGATAATGTCAAAAACGTTTGTAAATCC
TTTGAATGCATGTAGTGTGATTTAGTGCTGGTGATGACATTTCGCACACACCTAAAAATA
ATCCAACTGTCGCATTTACTCAACCCTTAATACTCGCTTATCTAAATTTCTAAAAATTGC
CCAGCTTTGTTACATCCATGTAGGTTGGTTCTGTATACAATGTACCCAAAACTTTA

InterProScan

SUPERFAMILY	UBQ-conjugating_enzyme/RWD (IPR016135) - T[5-151] 3.67E-63
Gene3D	UBQ-conjugating_enzyme/RWD (IPR016135) - T[6-153] 5.3E-71
ProSiteProfiles	UBQ-conjugat_E2 (IPR000608) - T[9-141] 46.626
CDD	UBQ-conjugat_E2 (IPR000608) - T[9-147] 1.84403E-64
Pfam	UBQ-conjugat_E2 (IPR000608) - T[10-146] 5.4E-52
ProSitePatterns	UBQ-conjugating_AS (IPR023313) - T[79-94] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
UB2D2_HUMAN	77.551 %	250	5.86E-87
UB2D3_HUMAN	76.871 %	249	1.33E-86
UB2D4_HUMAN	78.231 %	248	2.81E-86