- Transcript 'Phmamm.CG.MTP2014.S3...' >
- Transcript 'KH2012:KH.L154.1.v2....' >
- Transcript 'Haaura.CG.MTP2014.S4...' >
- Transcript 'KH2012:KH.L172.8.v1....' >
- Transcript 'KH2012:KH.C1.242.v1....'
Transcript Model
Transcript Id
KH2012:KH.C1.242.v1.A.nonSL1-1
Possible name(s)
ACTA1; ACTA2; ACTC1
Gene model
Location
KhC1 [7,723,613 / 7,725,905]
Amino acid sequence
Length: 398
>KH.C1.242.v1.A.nonSL1-1
FTRLRASSLHSTNSSKQTSIMSDSEEDQTALVCDNGSGLVKSGFAGDDAPRAVFPSIVGR
PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVA
PEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVMDAGD
GVSHNVPIYEGYALPHAIARLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLC
YVALDFEQEMATAASSTSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHET
TYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKY
SVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF
Nucleotide sequence
Length: 1,757
>KH2012:KH.C1.242.v1.A.nonSL1-1
ATTCACTCGCTTAAGAGCTTCAAGTCTTCACTCAACCAACTCAAGCAAGCAAACTTCAAT
CATGTCGGACTCAGAAGAAGATCAGACCGCTCTGGTTTGCGACAACGGATCAGGATTAGT
GAAATCAGGATTCGCCGGAGATGACGCACCTCGTGCTGTCTTCCCATCCATCGTTGGTCG
ACCCCGCCACCAGGGTGTCATGGTCGGTATGGGACAAAAAGACAGCTACGTTGGTGACGA
AGCACAAAGCAAGCGGGGTATTCTTACCTTGAAATACCCGATTGAGCACGGTATCATCAC
CAACTGGGACGACATGGAAAAGATCTGGCATCACACTTTCTATAACGAGCTCCGTGTTGC
TCCCGAAGAACACCCGACTCTGCTTACCGAAGCCCCACTTAACCCAAAGGCTAACCGAGA
AAAAATGACCCAGATCATGTTTGAAACCTTCAACGTACCGGCCATGTATGTAGCCATCCA
AGCCGTTCTTTCTTTATACGCATCTGGACGTACAACAGGTATCGTCATGGATGCTGGAGA
CGGTGTTTCACATAACGTTCCAATCTACGAGGGATACGCGCTCCCTCACGCCATCGCCCG
GTTGGATTTAGCTGGACGAGATCTTACTGATTATTTGATGAAGATTCTTACAGAGAGAGG
CTACTCTTTCGTTACAACTGCCGAGCGTGAAATCGTTCGAGATATCAAAGAGAAGCTCTG
CTACGTGGCGCTCGACTTCGAGCAGGAGATGGCCACCGCAGCATCCTCCACCTCCCTAGA
GAAGAGCTACGAACTTCCCGACGGTCAAGTCATTACTATCGGAAACGAGAGGTTCCGATG
CCCGGAAACTTTATTCCAACCTTCCTTTATCGGTATGGAATCTGCTGGAATCCACGAGAC
CACCTACAACTCCATCATGAAGTGCGACATTGACATCCGAAAGGATCTTTACGCCAACAA
CGTTCTCTCCGGAGGTACAACCATGTACCCTGGTATCGCTGACAGAATGCAGAAGGAGAT
CACTGCTCTTGCTCCCAGCACCATGAAGATCAAGATCATTGCCCCACCAGAGAGGAAATA
CTCCGTCTGGATCGGAGGATCCATCCTCGCATCTCTCTCCACCTTCCAACAGATGTGGAT
CACCAAGCAAGAGTACGACGAAGCTGGCCCATCCATTGTCCACCGAAAATGTTTCTAAAT
ATTAAGTTTTTGGTGTCATCAGTTTTTATTAAAACAATACAAACCGCTTTTTCACACAAA
GATTTTCGCTTGTTTTGTAGTAGGTTGAATTTGTTTAGTAGTTACAGGTGTTTAGTTTCT
AGTGTTAGAAAACCTATGTCTTTTTTCGTTATTAACCCAAATTTAAGTAAAATGTACAGG
CAAAACGACCAACAGCAGTGAGTATATATACCGTAACGGTTTGATAGTTCGCATAGATTT
ACTGATCTGGTCATCAAAATTTTGCATAATACATATAACAGTTGAATATACATATGGTAC
TTATGCTGCTCGCCGGTTCTTTACATTATGATCATTGTGATTTAAAACCGTCAATGTTAG
CTGTTTATACACCATCGCAGTGTTTCTTATTACCATCATCTATTTTCTGGCATCGTTTCC
TCAACTCTTTTCTTCCTTCCGGTGTTAGTCGCATTGAGAAGCAACATTATAGTTACAATG
AGCGGCTGTATATTCTGCTGTGGCATTGTTAGAGCTGTAGTGTTACGTACGCAGTTTCTA
ATTTTCTACGATCGTTT
| PANTHER |
Actin (IPR004000) - T[25-397] 2.4E-266 |
| Pfam |
Actin (IPR004000) - T[27-398] 4.2E-147 |
| SMART |
Actin (IPR004000) - T[28-398] 2.0E-232 |
| PRINTS |
Actin (IPR004000) - T[49-58] 3.2E-57 - T[72-83] 3.2E-57 - T[84-106] 3.2E-57 - T[138-151] 3.2E-57 - T[163-182] 3.2E-57 - T[259-275] 3.2E-57 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[76-86] . - T[379-387] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[127-139] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTA_HUMAN | 97.059 % | 769 | 0 |
| ACTS_HUMAN | 97.059 % | 769 | 0 |
| ACTC_HUMAN | 96.825 % | 769 | 0 |