- Transcript 'KH2012:KH.C12.419.v2...'
Transcript Model
Transcript Id
KH2012:KH.C12.419.v2.A.SL2-1
Possible name(s)
CD53; TSPAN11; TSPAN9
Gene model
Location
KhC12 [1,345,228 / 1,350,084]
Amino acid sequence
Length: 224
>KH.C12.419.v2.A.SL2-1
VEKVTELSKMSDSLTCCKYLMFFFNLLIFLSGAALLGVGIWVAVGADSFKQVVSQDPAIF
NAVYIIIAVGALLFLVGFLGCCGAIKENKFMLGAFFVMVLIIFILEIIGGVLAFVYYPKA
KQAAIDSMKLYDDNTPEGNTVKAAWDAFHTAFKCCGINSPTDWLGQTVTFVPTSCAGFTQ
GCESALKGYFWALGGVAIGVLFIELLAMIFACCLYRGVNKHQYA
Nucleotide sequence
Length: 1,381
>KH2012:KH.C12.419.v2.A.SL2-1
TTATAATATGCTTGTAAGTTGTAAATGCTAACAACTTTTTATACAGGCAGTAATTTGTTT
AAGTAGAAAAAGTAACTGAACTAAGCAAGATGTCGGATTCTTTAACATGCTGCAAGTACC
TCATGTTTTTCTTCAACCTTCTTATCTTTCTGAGCGGTGCTGCACTTCTCGGAGTTGGTA
TTTGGGTAGCAGTCGGCGCCGATTCGTTTAAACAAGTGGTCAGCCAGGACCCGGCTATAT
TCAATGCAGTCTACATCATCATTGCCGTCGGTGCTCTCTTGTTTCTCGTCGGGTTCCTCG
GGTGCTGCGGCGCAATTAAAGAGAATAAGTTCATGCTCGGAGCGTTCTTTGTCATGGTTC
TTATCATCTTCATACTTGAAATTATTGGGGGTGTTCTTGCATTTGTGTATTACCCGAAAG
CTAAGCAAGCAGCTATAGACTCCATGAAGTTGTATGATGATAACACCCCAGAAGGCAATA
CAGTCAAAGCCGCATGGGACGCTTTTCACACAGCTTTTAAATGCTGTGGCATTAATTCAC
CAACAGATTGGCTTGGACAAACTGTGACTTTTGTCCCAACTTCATGCGCCGGCTTTACAC
AAGGATGTGAGAGCGCCCTTAAAGGTTACTTCTGGGCATTAGGTGGTGTCGCGATTGGCG
TTCTCTTTATTGAGCTTCTGGCGATGATCTTCGCTTGCTGTTTGTACCGAGGTGTCAACA
AGCACCAATATGCTTGAGGTATATTCAACCTTCGTAGATAGTCGTTTAAATCACGGCACA
CACATACACATGTAAATATACTTAACGTAAAATCGATGTAGCCTTAGGTGTTTCGTAGAG
TTTCGAAAAAAAAGTATTTCCTTTATACCTTTGTGCTTTGAGCACAGATATTAAATATTA
TAGTTCTACAAATTTAATTTAATGCATAAAGATTATACATTAGGGTGAAAGAAGATGGGA
CACCTTATCATTCTATTTACTGGTCACATTTAGTAGTAAACAAAATAAATTATAAAACCG
TGTCCCATCTTCTCCAACCCTGTTATATTTTGTGTTGTGTAGCGATAACGGCTGACCAGC
TGAAGACATTTTTATGTGATAAAAAACTATTTGTAGCTGGCCAGCTGTTATCGTTACACA
ATACAGTATATACGATCTTTTTGCAATAAGTTAAATTTGGACAACTATAATATTAAATAT
TTTTACTCTAAGCACAGTCAACCGCTACACCTTCTTTTCAAAATAAGTTACCCCGTCAGA
TGGGTACCGGAATCCTGAATATTTTCACACATTTCTTTTTATCTTAAAAGTTTTAGGTTA
CAAATCAAACCTACGTTTTAACTTTGGCACTGCGTTTGAATAAATGAATAAATTGTAAAA
A
| PIRSF |
Tetraspanin (IPR000301) - T[8-224] 5.8E-50 |
| Pfam |
Tetraspanin/Peripherin (IPR018499) - T[18-216] 1.4E-43 |
| PRINTS |
Tetraspanin (IPR000301) - T[19-42] 8.4E-48 - T[59-85] 8.4E-48 - T[86-114] 8.4E-48 - T[192-218] 8.4E-48 |
| ProSitePatterns |
Tetraspanin_CS (IPR018503) - T[70-92] . |
| SUPERFAMILY |
Tetraspanin_EC2_sf (IPR008952) - T[114-190] 4.05E-13 |
| Gene3D |
Tetraspanin_EC2_sf (IPR008952) - T[117-190] 3.9E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TSN11_HUMAN | 30.992 % | 114 | 6.38E-31 |
| TSN18_HUMAN | 37.805 % | 111 | 4.46E-30 |
| TSN9_HUMAN | 34.199 % | 114 | 2.77E-31 |
