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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S3...'
  2. Transcript 'Phmamm.CG.MTP2014.S3...'
  3. Transcript 'Boleac.CG.SB_v3.S289...'
  4. EST 'BW407465'
  5. Transcript 'KH2012:KH.C12.419.v1...'

Transcript Model

Transcript Id

KH2012:KH.C12.419.v1.A.ND3-1

Possible name(s)

CD53; TSPAN11; TSPAN9

Location

KhC12 [1,347,487 / 1,350,084]

Sequences

Amino acid sequence

Length: 134

>KH.C12.419.v1.A.ND3-1
MLGAFFVMVLIIFILEIIGGVLAFVYYPKAKQAAIDSMKLYDDNTPEGNTVKAAWDAFHT
AFKCCGINSPTDWLGQTVTFVPTSCAGFTQGCESALKGYFWALGGVAIGVLFIELLAMIF
ACCLYRGVNKHQYA

Nucleotide sequence

Length: 1,050

>KH2012:KH.C12.419.v1.A.ND3-1
CATGCTCGGAGCGTTCTTTGTCATGGTTCTTATCATCTTCATACTTGAAATTATTGGGGG
TGTTCTTGCATTTGTGTATTACCCGAAAGCTAAGCAAGCAGCTATAGACTCCATGAAGTT
GTATGATGATAACACCCCAGAAGGCAATACAGTCAAAGCCGCATGGGACGCTTTTCACAC
AGCTTTTAAATGCTGTGGCATTAATTCACCAACAGATTGGCTTGGACAAACTGTGACTTT
TGTCCCAACTTCATGCGCCGGCTTTACACAAGGATGTGAGAGCGCCCTTAAAGGTTACTT
CTGGGCATTAGGTGGTGTCGCGATTGGCGTTCTCTTTATTGAGCTTCTGGCGATGATCTT
CGCTTGCTGTTTGTACCGAGGTGTCAACAAGCACCAATATGCTTGAGGTATATTCAACCT
TCGTAGATAGTCGTTTAAATCACGGCACACACATACACATGTAAATATACTTAACGTAAA
ATCGATGTAGCCTTAGGTGTTTCGTAGAGTTTCGAAAAAAAAGTATTTCCTTTATACCTT
TGTGCTTTGAGCACAGATATTAAATATTATAGTTCTACAAATTTAATTTAATGCATAAAG
ATTATACATTAGGGTGAAAGAAGATGGGACACCTTATCATTCTATTTACTGGTCACATTT
AGTAGTAAACAAAATAAATTATAAAACCGTGTCCCATCTTCTCCAACCCTGTTATATTTT
GTGTTGTGTAGCGATAACGGCTGACCAGCTGAAGACATTTTTATGTGATAAAAAACTATT
TGTAGCTGGCCAGCTGTTATCGTTACACAATACAGTATATACGATCTTTTTGCAATAAGT
TAAATTTGGACAACTATAATATTAAATATTTTTACTCTAAGCACAGTCAACCGCTACACC
TTCTTTTCAAAATAAGTTACCCCGTCAGATGGGTACCGGAATCCTGAATATTTTCACACA
TTTCTTTTTATCTTAAAAGTTTTAGGTTACAAATCAAACCTACGTTTTAACTTTGGCACT
GCGTTTGAATAAATGAATAAATTGTAAAAA

InterProScan

Pfam
Tetraspanin/Peripherin (IPR018499) - T[1-126] 1.4E-21
SUPERFAMILY
Tetraspanin_EC2_sf (IPR008952) - T[24-101] 1.19E-13
Gene3D
Tetraspanin_EC2_sf (IPR008952) - T[27-100] 1.2E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TSN11_HUMAN 27.976 % 73.9 5.68E-17