Aniseed - Transcript Card

Transcript 'KH2012:KH.C12.402.v1...'

Transcript Model

Transcript Id

KH2012:KH.C12.402.v1.A.SL1-1

Possible name(s)

KH.C12.402

Gene model

KH2012:KH.C12.402

Location

KhC12 [2,261,297 / 2,269,220]

Sequences

Amino acid sequence

Length: 452

>KH.C12.402.v1.A.SL1-1
FNAFNNNMNVNFEETDARSPGEIGQIIDQLTTNLVSDTDKTSFSDSTNACMNQLCELSKL
TGNTKRRAMGEALCNSRAGEMLMKYFKMASTSNCIQECQRKEFKTLREICFNFTDDNMML
AKEFGQEGLIGMLVGELNEHKATFNTNQNLKNIFTFSVMTLAFIVDDVDEEIVTKCSIVT
TSVQMFVASVASDNGRHLGFSSLELVDALVKLADNVTISEKIVNEGVVAPLIKMMTSGDR
ELETAATSLVWSLSFSDRNKDVFKKNLALMRRIEDFQNPYFYFIDKNLQKTAQGVTAVLN
MKRKATIASDATPESDKEGHIMISYNWKYKSIAVNLRDRLVQEGYKTWFDDDNMGSDILQ
SMSEGVEGAHVFLMLASQSYKESKNCRTEAVGAYKYDVPIIPLVVEAGYKANGWLGLLFG
MKRYHKFHNDADFDTSFVTLLKDVKSIVPKKE

Nucleotide sequence

Length: 1,762

>KH2012:KH.C12.402.v1.A.SL1-1
GGTCAAAAACGTGTTTAGTTTAATGCCTTTAACAATAACATGAATGTCAACTTTGAAGAA
ACAGATGCCAGAAGCCCAGGTGAAATTGGTCAAATTATCGACCAATTAACGACCAACCTT
GTCAGTGATACCGATAAAACAAGTTTCAGCGATTCCACCAATGCTTGCATGAATCAACTT
TGTGAGCTTTCCAAGCTAACAGGAAACACTAAGCGACGTGCTATGGGAGAAGCCTTATGT
AACAGCCGTGCAGGAGAAATGCTAATGAAATATTTCAAGATGGCGTCGACTAGCAATTGC
ATACAAGAATGCCAACGAAAGGAATTTAAAACTTTGCGGGAAATTTGCTTTAATTTCACC
GACGATAACATGATGCTTGCGAAGGAATTTGGACAAGAAGGTTTAATTGGAATGTTAGTC
GGTGAACTGAACGAACATAAAGCAACGTTTAACACCAACCAGAATTTGAAAAACATTTTC
ACCTTCAGTGTAATGACACTTGCCTTTATCGTGGATGACGTTGATGAAGAGATTGTGACG
AAATGTTCAATCGTCACTACGTCAGTGCAGATGTTCGTCGCATCGGTTGCAAGCGACAAC
GGAAGACATCTTGGTTTCTCGTCTCTTGAACTTGTGGATGCCCTGGTTAAGTTGGCAGAT
AATGTAACTATCAGTGAAAAGATTGTGAATGAAGGCGTTGTGGCTCCGTTGATAAAGATG
ATGACATCGGGCGATCGAGAATTGGAAACAGCTGCTACAAGTCTTGTTTGGAGTTTGTCG
TTTAGTGATCGAAACAAAGATGTCTTTAAAAAGAACTTGGCTTTGATGCGTCGGATAGAA
GACTTTCAAAACCCTTATTTTTACTTTATTGACAAAAACCTCCAAAAAACTGCGCAAGGT
GTGACAGCTGTACTCAATATGAAAAGAAAGGCAACTATTGCTTCTGATGCTACTCCTGAA
TCCGATAAAGAAGGCCACATCATGATAAGTTACAATTGGAAATATAAATCTATTGCCGTC
AACCTTCGAGATAGGCTGGTTCAAGAGGGTTACAAGACTTGGTTCGACGACGACAACATG
GGTTCCGATATATTGCAAAGTATGTCTGAAGGTGTAGAAGGTGCTCACGTCTTTCTTATG
CTGGCATCACAATCTTATAAAGAAAGTAAAAATTGCAGAACTGAGGCCGTAGGAGCTTAC
AAATATGACGTCCCTATAATTCCCCTTGTAGTAGAAGCAGGGTACAAGGCAAACGGTTGG
CTAGGTTTGCTGTTTGGAATGAAGCGATACCACAAGTTCCACAACGATGCAGACTTTGAC
ACAAGTTTTGTGACGCTTTTAAAAGATGTGAAATCAATAGTGCCGAAGAAGGAATGAAAC
TTGCTGTATTCCAACGCACAGTACCTTGTAGCATAAGTAGCATTACAAATATCCCACAGA
CAGTACACGGCCAAAAAAATGCATAAAAAAGGCTCCGCAAAGTCCTTTACAGTGGCACAT
GAAACAAATGTTAAATGAAAACATTATAATCTGGTATTAAAATCATGCTTTCGGTCCTAT
ATAGGAATACACATGGACGCTTGTATTCGAGTTTCGCCTTCCGATATGAATAAGCTGTAA
AAAGTTGAAGTATATGCAATTGAGCTTTTTAACTGTAATCACATTGTATAACAATGTTGT
TAACATTCTTTATTGTTTTTTTACTGTTACTGCTATTTTATTGTACCGGGTGTATGCGTC
TGCCCTATATATAGTACTGTAG

InterProScan

Gene3D	ARM-like (IPR011989) - T[9-274] 3.4E-8
SUPERFAMILY	ARM-type_fold (IPR016024) - T[204-265] 4.77E-5
Gene3D	Toll_tir_struct_dom_sf (IPR035897) - T[284-412] 1.0E-16
SUPERFAMILY	Toll_tir_struct_dom_sf (IPR035897) - T[309-441] 9.16E-15
Pfam	TIR_dom (IPR000157) - T[321-417] 3.6E-16

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value