- Transcript 'KH2012:KH.C12.379.v1...'
Transcript Model
Transcript Id
KH2012:KH.C12.379.v1.A.SL1-1
Possible name(s)
SLC6A1; SLC6A12; SLC6A13
Gene model
Location
KhC12 [4,527,845 / 4,533,677]
Amino acid sequence
Length: 613
>KH.C12.379.v1.A.SL1-1
ANSTVFLAIPESNTLQKHQPRNQNITGQDMKSRVTWDRPIEFIFSLLGYMVGLGNLWRFS
YLCFRNGGGAFLIPYLLSVAVFGLPMYIFEIAIGQFTQRGKLNAWDRIPLMKGYGYGCIV
MTTMSIVPYMLVMAWGIIYLYHSFTTHDLPWTVCDNAWNTEPCIAYNGWVSHTKYMNETN
LFANETTPTDATINATYSDTSLAQAQFWRYYVLRLANNRNDFYGGFNWPMLICLAISYLS
IIAITIKGIKSSGKVVYVTATFPYVMIMVLLIRGLTLEGALKGISTLLIPKFAELAKAQV
WIDAASQVLYTYAIGFASLTTFASYNHFNNNFYRQALILVPVGAFTSVLMGLMTFSYLGH
MAAMQGVEIDKILKTGPGLIFQVIPLGFSMLPFPQLWSVLFFVMFFFVAVDSVFSDFDAL
VSTITDIFPKLKLTRGRKILTNLGLGLFLFSISCSLLSNSGIYIFEFIFYYGASGIILLL
LAFFESISVGWLWDVDQFAADVKRMTGDQLSVWFKLSYRYFIPVITSSIFLFYCVKWTPL
KVADYTYPVWANVLGWALSLLSLLWIPGVFIYVLMNGRGSIKQVIIEISSVLNSQFCSRF
RNVFIYGKNSSNG
Nucleotide sequence
Length: 1,843
>KH2012:KH.C12.379.v1.A.SL1-1
GGCAAATAGTACCGTGTTCTTAGCTATACCTGAGAGTAATACGTTGCAGAAGCATCAGCC
TAGGAACCAAAATATAACCGGTCAAGATATGAAAAGTCGTGTAACATGGGACCGGCCAAT
CGAATTCATATTTTCACTTCTTGGTTACATGGTCGGCCTTGGAAATCTATGGCGTTTTTC
CTATCTTTGTTTTAGAAACGGAGGAGGAGCGTTTCTGATTCCTTATCTCTTGTCGGTGGC
TGTGTTTGGACTCCCCATGTATATATTTGAAATTGCGATTGGTCAATTCACACAGCGCGG
GAAACTAAATGCGTGGGACAGAATACCATTAATGAAGGGTTATGGATACGGATGCATAGT
CATGACCACTATGTCCATTGTGCCTTATATGCTGGTTATGGCGTGGGGAATAATTTATCT
TTATCATTCATTCACAACACATGACCTGCCTTGGACTGTCTGTGACAACGCGTGGAACAC
GGAGCCATGCATCGCATACAACGGGTGGGTTAGCCATACCAAGTATATGAACGAAACTAA
CTTGTTCGCAAACGAGACAACACCCACTGACGCAACTATAAATGCAACATATTCTGATAC
TTCACTTGCCCAAGCACAGTTTTGGAGGTACTACGTATTACGACTTGCCAATAACCGAAA
CGACTTCTATGGCGGCTTCAACTGGCCGATGCTGATTTGTTTGGCGATTTCCTATTTGTC
CATCATTGCAATCACCATCAAAGGAATCAAATCCAGCGGCAAGGTCGTCTATGTGACAGC
TACATTTCCATACGTCATGATTATGGTGCTGCTAATAAGAGGCCTAACATTGGAGGGGGC
GTTGAAAGGAATCAGCACACTTCTTATACCAAAATTTGCAGAGCTTGCCAAAGCTCAGGT
TTGGATCGACGCTGCGTCCCAAGTGCTCTACACTTACGCAATCGGTTTCGCAAGTTTGAC
AACATTTGCAAGTTACAATCACTTCAATAATAACTTCTACAGACAAGCGCTTATACTTGT
GCCCGTCGGCGCCTTCACGTCAGTTCTAATGGGATTGATGACTTTCTCATACCTCGGTCA
TATGGCTGCCATGCAAGGCGTAGAAATCGACAAAATTTTAAAAACTGGCCCTGGTTTAAT
ATTCCAAGTCATACCACTCGGATTCTCGATGCTGCCATTTCCCCAATTATGGTCTGTGTT
ATTTTTCGTCATGTTCTTTTTCGTAGCAGTGGACTCAGTGTTTTCAGATTTCGACGCCCT
CGTTTCTACAATCACTGATATTTTTCCGAAGTTGAAACTGACCAGAGGCCGCAAAATATT
AACAAACTTGGGACTCGGTTTATTTCTGTTTAGTATAAGTTGCAGCCTGTTGAGTAACAG
TGGAATTTACATTTTCGAGTTCATATTTTACTACGGAGCCTCTGGAATCATTCTATTATT
GCTCGCTTTCTTCGAGTCGATATCGGTGGGGTGGCTGTGGGACGTAGACCAATTTGCCGC
GGACGTTAAACGAATGACTGGAGATCAATTATCAGTTTGGTTTAAGCTGAGCTACCGGTA
TTTCATTCCTGTAATTACATCGTCAATTTTTCTCTTTTACTGTGTTAAATGGACCCCTCT
TAAAGTGGCGGACTATACCTATCCAGTTTGGGCGAACGTTCTTGGTTGGGCTTTATCTCT
ATTATCACTGCTGTGGATACCAGGGGTTTTCATTTACGTTCTAATGAATGGACGCGGGTC
CATTAAGCAGGTCATTATAGAAATATCAAGTGTCTTAAATTCGCAGTTTTGTTCACGATT
TCGGAATGTTTTTATTTACGGAAAGAATAGCTCTAATGGATGA
| ProSiteProfiles |
Na/ntran_symport (IPR000175) - T[32-579] 83.531 |
| Pfam |
Na/ntran_symport (IPR000175) - T[33-575] 4.0E-151 |
| SUPERFAMILY |
SNS_sf (IPR037272) - T[33-163] 1.7E-138 - T[202-574] 1.7E-138 |
| PANTHER |
Na/ntran_symport (IPR000175) - T[34-590] 1.8E-200 |
| PRINTS |
Na/ntran_symport (IPR000175) - T[41-62] 2.2E-51 - T[70-89] 2.2E-51 - T[113-139] 2.2E-51 - T[255-272] 2.2E-51 - T[337-357] 2.2E-51 - T[391-410] 2.2E-51 - T[475-495] 2.2E-51 - T[515-535] 2.2E-51 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| S6A12_HUMAN | 36.598 % | 395 | 1.76E-130 |
| S6A13_HUMAN | 36.852 % | 399 | 8.67E-132 |
| SC6A1_HUMAN | 35.849 % | 409 | 7.61E-136 |
