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TRANSCRIPT CARD

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  1. Clone 'cima812949'
  2. Clone 'cien55477'
  3. Clone 'cslv001a17'
  4. Clone 'cien68560'
  5. Transcript 'KH2012:KH.C12.294.v1...'

Transcript Model

Transcript Id

KH2012:KH.C12.294.v1.B.ND2-1

Possible name(s)

NLRC5; NLRP1; NLRP12

Location

KhC12 [2,532,854 / 2,539,732]

Sequences

Amino acid sequence

Length: 583

>KH.C12.294.v1.B.ND2-1
RFLSTTGKMYRTRIPITQVSHSGEVSVDDLFVPDETPLRLVAILGEAGAGKSTMSKRIAN
SESRICFHMEFMRMDYGEREFNLQEIIFENFYGCTPSEASAYFEWVQRNQFDCRIVIDGL
DQAAWEVSSAAPALNISSKAKVGKVMANLLSGNFLPNAEILITSRSHTMRLLHIGQRPQR
IVMLNGFSPEHGESLFTHFVGGDCAKWETLKREAPQLSLMCSNPAMLIYIAAACCARGDR
PIRSLTSVLDVVLADIKQSEHVKNVNLSEILHNVHKVAYKAVEKQIVLISVADLKEDDLT
IESVQDLTITLPLFNGNAIPTRVVDGSVKVFFNHQTLQEYFAAVHAVEALEMGNFKDFVA
KRVFTENWYMVRRFLLGRLLSPTFNPLVCGKKLLEEFQKCGQLITSYDEATSKEARRQFI
RLLLDVRECDNCDVTKAIAERFPRDINLSRTPLTSSDAHAFSYVMQHVTKDIDDVNIKYC
DLTTQQLKLIFSGFRIREKKIGSLHIDNNALETAGVRVICDILEKVERFLTMGDCFKDES
ASRSRYRNLNEEERIILQQALNNAGSENLILSVGGKKDIMRKS

Nucleotide sequence

Length: 2,330

>KH2012:KH.C12.294.v1.B.ND2-1
CCAATGAGTACGACTTAGCAAGAGAGGAAGAACAATCAAGAATAAACAAAAGTCACGAAA
CTTGGCTGACGATACTCTCTGTTGGTTTCGGCGTAGTGTTCGCCTTACTGGTTATCGTGG
CTGCTGTCTGTTCAACAGAAATCACCCAGTTCAACAAAACAGCGATGATAAATACGAAGA
AGGTCTTATTAACGGAAGTGGTTCTTCACTTGAATCGCAGCAATCTGGAGTTTAGATCCG
CGGGACACAGATCAATGCCCCATGTGACCAGGGACGACCTCAGACATTTGGTGGCCTCGA
ACAGACGAGAAGAGTTAAGAATACAAGGAATAGGCCTCAACCAGATAGACGTTCCCACCA
TTCACCCACGTATGCTAAAGATTTCTTTCTACGACGGGAAAAATGTATCGAACGAGGATA
CCTATAACCCAGGTTTCGCATTCCGGCGAGGTCTCAGTCGACGACCTTTTCGTTCCCGAC
GAAACCCCGCTGAGGTTGGTTGCGATACTTGGAGAGGCAGGGGCCGGTAAGTCGACCATG
AGCAAACGAATCGCTAACTCAGAATCTCGTATCTGTTTCCACATGGAGTTTATGCGAATG
GATTATGGGGAAAGAGAGTTCAACCTTCAGGAAATTATCTTCGAAAACTTTTACGGTTGC
ACACCAAGCGAGGCGAGCGCATATTTTGAGTGGGTACAGAGGAATCAGTTCGACTGTCGT
ATCGTCATTGATGGACTTGATCAGGCAGCTTGGGAGGTATCGAGCGCAGCACCAGCGCTA
AATATTTCCAGCAAAGCAAAAGTTGGCAAGGTCATGGCGAACCTTCTCAGCGGGAACTTT
CTGCCGAATGCGGAAATACTTATTACGTCACGAAGTCATACAATGCGTCTGCTACACATC
GGGCAACGACCACAGCGAATCGTGATGCTCAATGGGTTTTCGCCGGAACACGGAGAATCG
TTGTTCACCCACTTTGTCGGTGGGGATTGTGCGAAATGGGAAACTTTGAAGCGAGAGGCG
CCACAACTTTCCCTAATGTGTAGCAATCCAGCAATGCTTATTTACATCGCAGCTGCTTGC
TGTGCAAGAGGAGATCGACCCATTCGTTCGCTGACATCAGTCCTAGACGTGGTGTTAGCA
GACATCAAGCAATCTGAGCATGTCAAGAACGTTAACTTGTCTGAGATTTTACACAACGTC
CACAAAGTCGCTTATAAAGCTGTGGAGAAGCAGATTGTTCTCATATCTGTTGCAGATCTC
AAGGAAGATGATCTAACCATCGAATCGGTGCAAGACCTCACGATCACTCTGCCTTTATTC
AACGGAAATGCGATCCCGACGCGCGTGGTTGATGGATCAGTAAAGGTGTTTTTCAACCAT
CAAACCTTGCAGGAGTACTTCGCAGCCGTACACGCCGTCGAAGCGCTCGAGATGGGCAAC
TTTAAAGACTTCGTGGCGAAAAGGGTGTTCACGGAGAACTGGTACATGGTGCGGCGATTC
TTACTGGGAAGGCTTCTGAGTCCAACTTTTAACCCACTCGTTTGCGGAAAGAAATTGTTG
GAAGAATTTCAAAAATGCGGTCAGCTGATTACGTCATACGACGAAGCAACAAGCAAAGAA
GCAAGGCGTCAGTTCATCCGACTTCTGCTTGACGTCAGAGAATGTGACAATTGTGATGTC
ACAAAAGCAATAGCGGAACGTTTTCCACGTGACATCAATTTGAGTCGAACTCCTCTGACG
TCAAGCGACGCTCACGCTTTCAGTTACGTCATGCAACACGTCACAAAAGACATTGATGAC
GTAAACATCAAGTACTGTGACCTCACTACACAACAACTTAAACTAATATTCTCCGGATTT
CGGATCCGAGAGAAAAAGATTGGATCTCTTCATATTGATAACAATGCATTAGAAACCGCC
GGAGTTCGCGTGATATGCGATATACTGGAAAAGGTGGAACGTTTCCTAACTATGGGGGAT
TGTTTCAAAGACGAAAGCGCGAGTAGAAGTAGATACAGAAATCTGAACGAAGAAGAAAGA
ATAATCCTTCAACAAGCACTTAACAATGCTGGGAGCGAGAACCTTATTCTGAGCGTTGGC
GGAAAAAAAGACATCATGAGAAAATCGTGAACTACTCTAAATTATTGGATATATTGAGTA
AAATCTTTATTCAAATCTTAGTCACTGCATTATTTACATTTTTGCCGTGGAGGTAATATA
CAAGATATACGGTTATACATGATTTTTATGATGGTTACCATGTACATAATAAGTCATAGT
GATTTTGTTGTTGAACATGCCCGTCACATCAATACGCAATTAAAAACAAT

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[33-254] 4.95E-10
Gene3D
LRR_dom_sf (IPR032675) - T[413-553] 1.7E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value