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TRANSCRIPT CARD

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  1. Clone 'cidg810j16'
  2. Clone 'AHC0AAA261YA18'
  3. Transcript 'KH2012:KH.C12.26.v1....'

Transcript Model

Transcript Id

KH2012:KH.C12.26.v1.A.SL1-1

Possible name(s)

SMAD2; SMAD3; SMAD5

Location

KhC12 [156,322 / 163,445]

Sequences

Amino acid sequence

Length: 434

>KH.C12.26.v1.A.SL1-1
KHRTLKVNMLQFTPPVVKELLGWKRGEMSAQDEKFAEKAIKSLVKKLKKSGGLEDLKKAV
TKQSIDTKCVKIPRSLDGRLQVSHKKSLPHVLYCRLWRWPDLRNHHELRPVEKCEYAFQL
KRDEVCVNPYHYTRVETPALPPILVPRQTEPIPAEFPPLDDWSIVPENATFEPSMQPSGN
FTIPESPPPGYMSEDSEFSESGSNLSSPGPPTTFSDGTTSASPSSGSDDVQSVAYHEPPH
WCSISYYELNQRIGEPFHATQSSLTVDGFTDPSNSERFCLGLLSNINRTQHVEITRRHVG
KGVRLYYIAGEVFAECLSDSAIFVQSPNCNQRYGWHPATVVKIPPGCHLKIFNNQEFAAL
LSQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQHVTSTPCWIEMHLNGPLQWLDKVL
QQMGAPHIPCSSMS

Nucleotide sequence

Length: 2,745

>KH2012:KH.C12.26.v1.A.SL1-1
TTGTTACTACCACCACATAGGTGAAAACTGTTGTTTCATTTTCGAGTTGGTTTTAATGCC
AGGCAAACGTTGGATATTGAATATCTATTGAAAACATCGAACATTGAAAGTAAATATGTT
GCAATTCACTCCTCCAGTTGTTAAAGAACTCCTGGGGTGGAAGAGAGGGGAAATGTCAGC
TCAGGATGAAAAGTTTGCTGAGAAAGCAATCAAAAGTTTGGTAAAAAAGCTCAAGAAAAG
TGGGGGGTTGGAGGATCTGAAGAAGGCTGTGACGAAGCAATCAATCGATACAAAGTGTGT
GAAGATACCTCGGTCACTAGATGGCAGGCTGCAGGTTTCCCACAAGAAGTCCCTCCCCCA
TGTTTTATACTGTAGGTTGTGGAGGTGGCCGGACCTGAGGAACCATCATGAGTTACGACC
GGTGGAGAAATGTGAATATGCTTTCCAACTAAAGAGAGATGAGGTATGCGTGAACCCGTA
CCATTACACGCGTGTAGAAACACCCGCCCTTCCCCCAATATTGGTCCCACGGCAAACGGA
ACCAATACCTGCCGAGTTCCCACCATTGGATGATTGGTCTATTGTTCCTGAGAATGCTAC
TTTTGAACCAAGTATGCAACCATCAGGTAACTTCACGATACCAGAGAGCCCACCACCAGG
CTACATGAGCGAGGATAGCGAGTTCAGTGAATCGGGTTCCAACTTATCAAGTCCCGGCCC
TCCAACTACATTCTCAGATGGAACAACGAGCGCTTCCCCCTCCTCAGGCAGCGATGATGT
TCAATCTGTTGCGTATCATGAACCCCCACATTGGTGTTCCATATCTTACTATGAACTTAA
TCAAAGAATAGGTGAGCCCTTCCACGCCACTCAATCCTCGCTTACCGTCGACGGATTCAC
CGATCCTTCAAACTCGGAGAGGTTTTGTCTCGGACTTCTTTCCAACATCAACCGAACACA
GCATGTTGAGATAACTAGGAGACACGTGGGGAAAGGCGTTCGTTTATATTACATCGCTGG
TGAAGTATTCGCTGAGTGTTTGAGTGACAGCGCGATATTCGTGCAGAGTCCGAACTGTAA
CCAGCGATACGGATGGCACCCAGCTACTGTTGTTAAGATACCACCTGGATGTCACCTTAA
AATATTCAATAACCAGGAATTTGCGGCTCTTTTGTCCCAATCAGTAAACCAGGGATTTGA
GGCAGTTTACCAACTAACTAGGATGTGCACGATTCGTATGAGTTTTGTTAAAGGTTGGGG
AGCTGAGTACCGAAGACAACATGTCACTTCCACCCCATGTTGGATAGAAATGCATCTGAA
TGGTCCACTGCAGTGGTTGGACAAAGTGTTGCAGCAGATGGGAGCTCCACATATACCATG
TTCCAGCATGTCTTGATGATGGAACTTGTACATAAGCATGTCTTGCACCAGGATTGGTAA
AAACTTCATATTTGAATATTTCACTTTGTAAATATCGTTGCACTACTTGTCATATATCCA
TCATGCCAATTATGTTTTACCACCAGCCAAAAGTATTAGGGTTTAATGAGAATGTTTAAA
AGCATATCGTTGAAGTTTTTATGATATTTTAACACATGATATTAGAACACGGGTTCTTAT
ACTTTAACACACAACCATTTTAACAATGTCACAAAACCCACATTTCGCTCAGGAAAACAT
GTTTAGTCCAAACTTATATGACAGTTTATCATCTTTCCTTATGAACCATCCGATGGAGAA
ACACCTCCAAGCATAAGAACCTATGTTCTACAAAATATGTTGTTAATATTATGGCCCTGT
TTCAATGCAAACAACAAACCGTATATTCATCTCAAATTGTTCTTTATTTTAAACATGGTT
TAGAACCTTAATCCATCTTTAGTGAAATGAAGACAATTGTGTTATAAATACCTACGGAAT
GTTATGTTGTATGGAAACTGACCAGAAATCCCAAGTTTTATTCATCGATAATTACTTCTG
TCTTCTTTAACTAAAATATCAAGTGAAAATTTCTTTGTAGATTTTGTGTTTGTTCAACAA
CAAATAACGCTTGAACGCCAATCTACAAAACATTGCCCAACTATACACTTTACGTACGTT
GTAATGTTACTGGCGAACTTAATTTAAAAGTTCCGATTTTAAATCCAATGTTTTTAATGC
AGCATCAACAAGTAACTAATATTTTATTTTTACATCATTTTTATTGTTTTTACTTGTGAG
CAAAACTAATGAAGCAATTTGTCAATCTGAGTACATTTATTCAAATTTATAGTACGTATG
TGGTAAATCGTAAGTCACCCAGCCATGAAAGTTTCATTTATTACAATTGAATTTTTAGTA
CATATGTTTCAAACTATGTTTACTACTATTTTGAATTGAGCATAATATTTTTCAGCGATT
TTTACAAATGAAATTTGACATAAATTTGTTAAAACCTATGTTTTGGCCGCAATGCGGGGA
CTTGAGTTTTATTAAATTTTAGTAAAATTTGACTTTTACCTGAATCCTATGAAATATTTG
TTTTCATATCAAAGGTTGAACATCCAAGTAATTATGTTTGTGTTGAATGCAACCTTTGTT
TCCATTGTTTCATATGGTTGACTCACATTGTTTATTGCACTATTAACACTACTGTACATA
ATTTCCTATTAACACGTCTTGCAAGTGCCTACAATAAATCATCTTTTTTATTTTAAATTT
ATGTTTTGTGTATTTGTGCATCTTATACACGTGGCAGCGGCAAAA

InterProScan

Gene3D
SMAD_MH1_sf (IPR036578) - T[6-149] 1.0E-63
PANTHER
Dwarfin (IPR013790) - T[7-434] 8.0E-230
ProSiteProfiles
MAD_homology_MH1 (IPR013019) - T[15-141] 35.44
SUPERFAMILY
SMAD_MH1_sf (IPR036578) - T[16-136] 1.7E-46
SMART
MAD_homology1_Dwarfin-type (IPR003619) - T[31-139] 6.3E-55
Pfam
MAD_homology1_Dwarfin-type (IPR003619) - T[37-136] 5.2E-40
SUPERFAMILY
SMAD_FHA_dom_sf (IPR008984) - T[207-424] 2.73E-92
Gene3D
SMAD-like_dom_sf (IPR017855) - T[232-434] 5.3E-96
SMART
SMAD_dom_Dwarfin-type (IPR001132) - T[239-410] 3.8E-99
Pfam
SMAD_dom_Dwarfin-type (IPR001132) - T[240-410] 3.6E-77
ProSiteProfiles
SMAD_dom_Dwarfin-type (IPR001132) - T[241-434] 73.508

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SMAD3_HUMAN 73.364 % 639 0
SMAD5_HUMAN 56.78 % 514 0
SMAD2_HUMAN 67.377 % 616 0