- Transcript 'KH2012:KH.C12.26.v1....'
Transcript Model
Transcript Id
KH2012:KH.C12.26.v1.A.SL1-1
Possible name(s)
SMAD2; SMAD3; SMAD5
Gene model
Location
KhC12 [156,322 / 163,445]
Amino acid sequence
Length: 434
>KH.C12.26.v1.A.SL1-1
KHRTLKVNMLQFTPPVVKELLGWKRGEMSAQDEKFAEKAIKSLVKKLKKSGGLEDLKKAV
TKQSIDTKCVKIPRSLDGRLQVSHKKSLPHVLYCRLWRWPDLRNHHELRPVEKCEYAFQL
KRDEVCVNPYHYTRVETPALPPILVPRQTEPIPAEFPPLDDWSIVPENATFEPSMQPSGN
FTIPESPPPGYMSEDSEFSESGSNLSSPGPPTTFSDGTTSASPSSGSDDVQSVAYHEPPH
WCSISYYELNQRIGEPFHATQSSLTVDGFTDPSNSERFCLGLLSNINRTQHVEITRRHVG
KGVRLYYIAGEVFAECLSDSAIFVQSPNCNQRYGWHPATVVKIPPGCHLKIFNNQEFAAL
LSQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQHVTSTPCWIEMHLNGPLQWLDKVL
QQMGAPHIPCSSMS
Nucleotide sequence
Length: 2,745
>KH2012:KH.C12.26.v1.A.SL1-1
TTGTTACTACCACCACATAGGTGAAAACTGTTGTTTCATTTTCGAGTTGGTTTTAATGCC
AGGCAAACGTTGGATATTGAATATCTATTGAAAACATCGAACATTGAAAGTAAATATGTT
GCAATTCACTCCTCCAGTTGTTAAAGAACTCCTGGGGTGGAAGAGAGGGGAAATGTCAGC
TCAGGATGAAAAGTTTGCTGAGAAAGCAATCAAAAGTTTGGTAAAAAAGCTCAAGAAAAG
TGGGGGGTTGGAGGATCTGAAGAAGGCTGTGACGAAGCAATCAATCGATACAAAGTGTGT
GAAGATACCTCGGTCACTAGATGGCAGGCTGCAGGTTTCCCACAAGAAGTCCCTCCCCCA
TGTTTTATACTGTAGGTTGTGGAGGTGGCCGGACCTGAGGAACCATCATGAGTTACGACC
GGTGGAGAAATGTGAATATGCTTTCCAACTAAAGAGAGATGAGGTATGCGTGAACCCGTA
CCATTACACGCGTGTAGAAACACCCGCCCTTCCCCCAATATTGGTCCCACGGCAAACGGA
ACCAATACCTGCCGAGTTCCCACCATTGGATGATTGGTCTATTGTTCCTGAGAATGCTAC
TTTTGAACCAAGTATGCAACCATCAGGTAACTTCACGATACCAGAGAGCCCACCACCAGG
CTACATGAGCGAGGATAGCGAGTTCAGTGAATCGGGTTCCAACTTATCAAGTCCCGGCCC
TCCAACTACATTCTCAGATGGAACAACGAGCGCTTCCCCCTCCTCAGGCAGCGATGATGT
TCAATCTGTTGCGTATCATGAACCCCCACATTGGTGTTCCATATCTTACTATGAACTTAA
TCAAAGAATAGGTGAGCCCTTCCACGCCACTCAATCCTCGCTTACCGTCGACGGATTCAC
CGATCCTTCAAACTCGGAGAGGTTTTGTCTCGGACTTCTTTCCAACATCAACCGAACACA
GCATGTTGAGATAACTAGGAGACACGTGGGGAAAGGCGTTCGTTTATATTACATCGCTGG
TGAAGTATTCGCTGAGTGTTTGAGTGACAGCGCGATATTCGTGCAGAGTCCGAACTGTAA
CCAGCGATACGGATGGCACCCAGCTACTGTTGTTAAGATACCACCTGGATGTCACCTTAA
AATATTCAATAACCAGGAATTTGCGGCTCTTTTGTCCCAATCAGTAAACCAGGGATTTGA
GGCAGTTTACCAACTAACTAGGATGTGCACGATTCGTATGAGTTTTGTTAAAGGTTGGGG
AGCTGAGTACCGAAGACAACATGTCACTTCCACCCCATGTTGGATAGAAATGCATCTGAA
TGGTCCACTGCAGTGGTTGGACAAAGTGTTGCAGCAGATGGGAGCTCCACATATACCATG
TTCCAGCATGTCTTGATGATGGAACTTGTACATAAGCATGTCTTGCACCAGGATTGGTAA
AAACTTCATATTTGAATATTTCACTTTGTAAATATCGTTGCACTACTTGTCATATATCCA
TCATGCCAATTATGTTTTACCACCAGCCAAAAGTATTAGGGTTTAATGAGAATGTTTAAA
AGCATATCGTTGAAGTTTTTATGATATTTTAACACATGATATTAGAACACGGGTTCTTAT
ACTTTAACACACAACCATTTTAACAATGTCACAAAACCCACATTTCGCTCAGGAAAACAT
GTTTAGTCCAAACTTATATGACAGTTTATCATCTTTCCTTATGAACCATCCGATGGAGAA
ACACCTCCAAGCATAAGAACCTATGTTCTACAAAATATGTTGTTAATATTATGGCCCTGT
TTCAATGCAAACAACAAACCGTATATTCATCTCAAATTGTTCTTTATTTTAAACATGGTT
TAGAACCTTAATCCATCTTTAGTGAAATGAAGACAATTGTGTTATAAATACCTACGGAAT
GTTATGTTGTATGGAAACTGACCAGAAATCCCAAGTTTTATTCATCGATAATTACTTCTG
TCTTCTTTAACTAAAATATCAAGTGAAAATTTCTTTGTAGATTTTGTGTTTGTTCAACAA
CAAATAACGCTTGAACGCCAATCTACAAAACATTGCCCAACTATACACTTTACGTACGTT
GTAATGTTACTGGCGAACTTAATTTAAAAGTTCCGATTTTAAATCCAATGTTTTTAATGC
AGCATCAACAAGTAACTAATATTTTATTTTTACATCATTTTTATTGTTTTTACTTGTGAG
CAAAACTAATGAAGCAATTTGTCAATCTGAGTACATTTATTCAAATTTATAGTACGTATG
TGGTAAATCGTAAGTCACCCAGCCATGAAAGTTTCATTTATTACAATTGAATTTTTAGTA
CATATGTTTCAAACTATGTTTACTACTATTTTGAATTGAGCATAATATTTTTCAGCGATT
TTTACAAATGAAATTTGACATAAATTTGTTAAAACCTATGTTTTGGCCGCAATGCGGGGA
CTTGAGTTTTATTAAATTTTAGTAAAATTTGACTTTTACCTGAATCCTATGAAATATTTG
TTTTCATATCAAAGGTTGAACATCCAAGTAATTATGTTTGTGTTGAATGCAACCTTTGTT
TCCATTGTTTCATATGGTTGACTCACATTGTTTATTGCACTATTAACACTACTGTACATA
ATTTCCTATTAACACGTCTTGCAAGTGCCTACAATAAATCATCTTTTTTATTTTAAATTT
ATGTTTTGTGTATTTGTGCATCTTATACACGTGGCAGCGGCAAAA
| Gene3D |
SMAD_MH1_sf (IPR036578) - T[6-149] 1.0E-63 |
| PANTHER |
Dwarfin (IPR013790) - T[7-434] 8.0E-230 |
| ProSiteProfiles |
MAD_homology_MH1 (IPR013019) - T[15-141] 35.44 |
| SUPERFAMILY |
SMAD_MH1_sf (IPR036578) - T[16-136] 1.7E-46 |
| SMART |
MAD_homology1_Dwarfin-type (IPR003619) - T[31-139] 6.3E-55 |
| Pfam |
MAD_homology1_Dwarfin-type (IPR003619) - T[37-136] 5.2E-40 |
| SUPERFAMILY |
SMAD_FHA_dom_sf (IPR008984) - T[207-424] 2.73E-92 |
| Gene3D |
SMAD-like_dom_sf (IPR017855) - T[232-434] 5.3E-96 |
| SMART |
SMAD_dom_Dwarfin-type (IPR001132) - T[239-410] 3.8E-99 |
| Pfam |
SMAD_dom_Dwarfin-type (IPR001132) - T[240-410] 3.6E-77 |
| ProSiteProfiles |
SMAD_dom_Dwarfin-type (IPR001132) - T[241-434] 73.508 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SMAD3_HUMAN | 73.364 % | 639 | 0 |
| SMAD5_HUMAN | 56.78 % | 514 | 0 |
| SMAD2_HUMAN | 67.377 % | 616 | 0 |