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TRANSCRIPT CARD

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  1. Transcript 'Haaura.CG.MTP2014.S2...'
  2. Transcript 'KH2012:KH.C12.249.v1...'

Transcript Model

Transcript Id

KH2012:KH.C12.249.v1.R.ND1-1

Possible name(s)

TRIM2; TRIM3; TRIM71

Location

KhC12 [1,212,298 / 1,218,270]

Sequences

Amino acid sequence

Length: 247

>KH.C12.249.v1.R.ND1-1
KMSEWSMVNSYNHLGCAVGQFDNARGFDLSVKCRTLTVTDINNKRIQVVDDQGKYLHHWS
VTVNGLRLCPLNLRRQDNEVVAAVVEGCAVLYNCPNVTDFQGITVKLLHTFGNDDLVFPR
SILVNSKDQYVISDVGRQRVTVHDVYGKVLRAIGHSEDTMRFNWPYYMCADSKGRIAVSD
SHNRCVKLFDEKDFKFISSFGENELTCATGVCESLDGRSFYVGDYDTKSLIEYSTDGKYI
GHIDKKT

Nucleotide sequence

Length: 1,261

>KH2012:KH.C12.249.v1.R.ND1-1
AAAAACATATTGTTTTTATGCTGTTTTAACGTCTATGCCTGAAGTCGATTAAAAGTAGCT
GACTTTGTGAATATAAATAAAAAATGTCAGAATGGTCAATGGTAAACTCATACAACCACC
TCGGCTGTGCTGTTGGACAGTTCGATAATGCACGAGGTTTTGATTTGTCAGTTAAATGTC
GGACGTTAACCGTTACAGACATCAATAACAAACGAATACAGGTGGTGGACGACCAAGGAA
AATATTTACACCACTGGAGTGTTACAGTAAACGGTTTACGACTCTGTCCTTTAAATCTAC
GAAGGCAAGATAACGAAGTAGTGGCAGCTGTAGTAGAAGGGTGTGCGGTGCTATATAACT
GTCCTAATGTTACAGATTTCCAAGGTATAACAGTCAAGTTATTGCATACATTTGGCAACG
ACGATCTCGTTTTTCCACGCAGCATACTCGTTAATAGTAAAGACCAATACGTGATAAGTG
ATGTAGGTCGACAGCGTGTAACTGTACATGACGTGTATGGCAAGGTGTTACGTGCCATTG
GTCACAGTGAAGATACAATGCGATTCAACTGGCCTTACTATATGTGTGCTGACAGTAAAG
GTCGTATTGCTGTGTCCGATTCACATAACAGATGCGTGAAATTATTTGATGAAAAAGATT
TCAAATTTATTTCTTCTTTTGGGGAGAACGAGCTCACGTGCGCCACCGGTGTTTGTGAAA
GTTTAGACGGAAGGTCGTTTTACGTCGGGGACTACGATACTAAATCCCTCATAGAGTATT
CAACAGATGGTAAATACATTGGACATATTGACAAAAAGACATAACCAACACCTACCGCTG
ATATACAAAATAGACGACCGTGGAAGGATTTTCACAACAACAAGGGACGGGTTTGACCGT
GTACGCGAAATACGAACAAAGATGATCTTTTTGTGTGCTGCGCAAAAGTTGTTAACAATA
ACATGCTAGATGTACCTTTAGTTATGTTGAAAATATAGAGTGGGGAAGATGGGACATCTT
TTAGTTCTATTTACTCGTCCCATTTGGTGGTAAACAAACAATTATAAAACTGTATCCTCA
CGACTCCCATAGACCGTTGTTACTTGTTTAAAACACGATCAGGATATTTGAATATTATGT
GCTAAAGATGTCCCAACGTTATACTTAGCAAAATATTAGCAATTCGTAAAAAAGTCCTTT
CGTAAGCTGGTGTAAAAGGCACCATCTTTCAAACATGAATAATTAAAACAGACTGTACGG
G

InterProScan

Gene3D
6-blade_b-propeller_TolB-like (IPR011042) - T[3-247] 1.9E-33
ProSiteProfiles
NHL_repeat_subgr (IPR013017) - T[38-52] 4.832 - T[105-146] 7.484 - T[162-192] 10.198 - T[195-236] 4.091

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value