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- Transcript 'KH2012:KH.L4.55.v1.A...' >
- Transcript 'KH2012:KH.L4.55.v1.A...' >
- Transcript 'KH2012:KH.C12.188.v2...'
Transcript Model
Transcript Id
KH2012:KH.C12.188.v2.A.nonSL6-1
Possible name(s)
RPS4X; RPS4Y1; RPS4Y2
Gene model
Location
KhC12 [398,597 / 403,095]
Amino acid sequence
Length: 268
>KH.C12.188.v2.A.nonSL6-1
KFSSFLETRMARGPKKHLKRLNAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLCIFLRNR
LHYALTYDETKRILMQRLVKVDGKVRTDTTYPAGFMDVITIDKTAEYFRLIYDVKGRFAV
HRITSDEAKYKLCKVKKVATAPKGVPYLVTHDARTIRYPNPDIKVHDTVVVDIASGKITG
FVHLDSGNMCMITGGHNLGRVGTVMHRERHPGSFDIIHVKDALGHTFATRLSNVFIIGQA
NKPMVSLPRGKGIKLTIAEERDRRLATK
Nucleotide sequence
Length: 863
>KH2012:KH.C12.188.v2.A.nonSL6-1
GGGTTTTGTGAAAATTTTCTTCCTTTTTAGAAACCAGGATGGCGCGTGGACCAAAGAAGC
ATCTGAAGCGCTTAAATGCGCCCAAGCATTGGATGTTAGACAAACTGACGGGTGTTTTCG
CTCCCAGACCATCCACAGGACCCCACAAACTGCGAGAGTGCCTTCCTCTCTGTATTTTCC
TCCGTAATCGTCTGCATTATGCTCTCACTTACGATGAAACGAAGCGGATCCTCATGCAAA
GATTGGTGAAGGTTGACGGTAAAGTTCGAACTGACACAACATATCCAGCTGGATTTATGG
ACGTAATCACCATTGACAAGACAGCTGAGTATTTCCGTCTCATCTACGACGTGAAAGGAC
GTTTTGCTGTTCATAGAATTACTTCTGATGAAGCAAAGTACAAGTTGTGCAAGGTGAAGA
AGGTTGCCACGGCGCCCAAGGGAGTCCCGTACCTCGTCACCCACGATGCACGAACCATTC
GTTACCCCAACCCCGATATTAAGGTACACGATACAGTGGTTGTTGATATCGCGAGTGGAA
AGATTACTGGTTTTGTGCATTTGGACAGCGGTAACATGTGCATGATCACTGGAGGTCACA
ACTTGGGGCGAGTAGGAACAGTTATGCATAGAGAGAGACATCCAGGATCATTTGACATCA
TCCACGTAAAAGATGCGCTCGGCCACACCTTTGCTACCCGTCTATCGAATGTTTTCATCA
TAGGCCAGGCCAACAAACCAATGGTTTCCCTTCCACGAGGAAAAGGAATCAAACTGACGA
TCGCTGAAGAGAGAGACCGTCGGTTGGCAACAAAGTAAATGCCATTGAATTGAGCATTTC
AATAAATATTGAAATCGGATTTA
| PANTHER |
Ribosomal_S4e (IPR000876) - T[10-268] 4.0E-143 |
| PIRSF |
Ribosomal_S4e (IPR000876) - T[10-250] 3.9E-96 |
| Pfam |
Ribosomal_S4e_N (IPR013843) - T[12-48] 4.2E-22 |
| Hamap |
Ribosomal_S4e (IPR000876) - T[16-247] 35.469 |
| ProSitePatterns |
Ribosomal_S4e_N_CS (IPR018199) - T[17-31] . |
| ProSiteProfiles |
S4_RNA-bd (IPR002942) - T[51-114] 9.298 |
| Pfam |
S4_RNA-bd (IPR002942) - T[55-99] 2.2E-5 |
| CDD |
S4_RNA-bd (IPR002942) - T[71-121] 5.39948E-4 |
| ProDom |
Ribosomal_S4e_central_region (IPR013845) - T[96-190] 1.0E-36 |
| Pfam |
Ribosomal_S4e_central_region (IPR013845) - T[104-178] 4.2E-37 |
| Gene3D |
Ribosomal_S4e_central_sf (IPR038237) - T[131-180] 7.9E-26 |
| Gene3D |
Rib_L2_dom2 (IPR014722) - T[184-254] 6.7E-36 |
| Pfam |
KOW (IPR005824) - T[187-220] 2.5E-5 |
| Pfam |
40S_S4_C (IPR032277) - T[221-268] 9.0E-28 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RS4X_HUMAN | 76.062 % | 429 | 5.14E-154 |
| RS4Y1_HUMAN | 74.517 % | 425 | 1.7E-152 |
| RS4Y2_HUMAN | 72.201 % | 409 | 3.31E-146 |