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TRANSCRIPT CARD

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  1. Transcript 'Cisavi.CG.ENS81.R3.1...' > 
  2. Transcript 'KH2012:KH.C12.116.v2...' > 
  3. Region 'REG00001594' > 
  4. Transcript 'KH2012:KH.C2.422.v1....' > 
  5. Transcript 'KH2012:KH.C12.173.v1...'

Transcript Model

Transcript Id

KH2012:KH.C12.173.v1.A.ND1-1

Possible name(s)

TRAPPC11

Gene model

KH2012:KH.C12.173

Location

KhC12 [3,111,616 / 3,114,788]

Sequences

Amino acid sequence

Length: 939

>KH.C12.173.v1.A.ND1-1
AFYELSQVYYRTEARRVKAHKEFLNKTTHQLLFPRHQFKIGFFNEMIQDPTSALKHYRHA
YTHVHELRTYESNNLEIKLVGGFVNYKICKLCFLKLNAPLDAITQFRQHVEQFKSMCGSQ
DLLFEHSAWLSHQYQVFADLFSEAISKGLSAIQTQHPGFYYNQAAYYAKIRKQCAQKLKA
SLQDQTYPSEDPLKVEVLEFYGQRPWRQGQQRIDPADHSKEKDGIMALQLEETKQDHSLQ
IISLLGSAISIFKNYHCHRLKRQLTVQMGEEYYHAGDYMKVVALLTRATADYRTGRCWLI
LSKILWMLLHCSYLTADLESFLIHSTQLLSRHLSIPHDDKITVQHSLMNLLMRQIPLPIL
LPASFDHVPEHHTSAYNDAEEKWKTLLSSPKSFPVYSLQVTDAIPFVECKFQFSKPQFTM
EEVIALHVFTRVTCPAPCKISKLLVLLNNGTELSVEENAEKDAKKSDLKQYTPFEIKEHV
LKFLCSPHEKQNVLEVRQLSVLLGSSNGLSIDLIWSDQFVDAATDPKPSSPFSMAQLGGE
KCWDDISNITSTEIVECPSRLKVNILHKTPAFVGEAYAIDIKINSSESNDFTAENVTAVL
SLKQNENSETEAHLSEKCSDLHTSKAKSLQLALGNMETNQTIERTVYVQTTQASVLHFSL
HVSYQMQKPSELPKTGVLTCTSSESIDFAVEVLTPFNFTAHVTSLNLDSVSTVNQNQPFI
VLVNVSSENFSPIQINSFSLHLNENDGFKTAGEQSPALDGKVLQQRECAVGAFTVLCDKS
HDPSTSFLIGSCTFEWSRFESENPAQKVTLQRKLPSILVKSSPVSITAAVPAFGHLRQKL
TITYSLKSHISEPQTIEISCEGSDAFMFSGTKNSTGFLAPGEAHNYSYNFFPLAIGYQEL
PRFMVSCTKHAEDEKAAQKVDQYPQNRFIFVKPLTEKQL

Nucleotide sequence

Length: 3,172

>KH2012:KH.C12.173.v1.A.ND1-1
GCTTTTTACGAGCTATCGCAGGTCTACTATAGAACAGAGGCACGCAGAGTTAAAGCACAT
AAGGAGTTTCTAAATAAAACAACACACCAGCTTTTATTTCCAAGGCACCAATTTAAAATC
GGATTTTTCAATGAAATGATTCAAGATCCAACGAGTGCCCTGAAGCATTACCGTCACGCA
TACACTCATGTCCATGAACTACGCACTTACGAAAGCAACAACCTTGAAATTAAGCTAGTA
GGGGGCTTTGTAAACTACAAAATCTGCAAATTGTGTTTTTTGAAGCTAAACGCCCCTCTA
GATGCAATAACCCAGTTCAGACAGCATGTTGAGCAGTTCAAATCAATGTGTGGCTCACAG
GATCTCTTATTTGAACACAGTGCTTGGCTAAGCCACCAGTATCAGGTGTTTGCTGACCTT
TTCAGTGAAGCAATTTCAAAAGGCCTGTCTGCCATTCAAACCCAGCACCCTGGCTTCTAC
TACAACCAGGCAGCTTACTATGCGAAAATCCGAAAGCAATGCGCCCAGAAATTAAAGGCT
TCTTTACAAGATCAAACATACCCCTCAGAAGACCCTTTGAAAGTGGAAGTGCTTGAGTTT
TACGGCCAACGGCCTTGGCGGCAAGGACAGCAAAGGATTGACCCTGCTGATCACAGCAAA
GAAAAAGATGGCATAATGGCTTTGCAGTTAGAGGAGACAAAACAAGACCATTCACTGCAA
ATTATTTCCCTTCTTGGCTCCGCTATCTCTATATTTAAGAACTATCACTGTCATCGGCTT
AAACGGCAACTCACAGTGCAGATGGGAGAAGAATATTACCACGCTGGGGATTACATGAAA
GTAGTTGCTCTACTGACACGCGCAACTGCTGACTATCGTACCGGACGCTGCTGGTTGATC
CTATCGAAAATCCTCTGGATGTTGCTCCACTGTTCCTACCTCACAGCAGATCTTGAGTCA
TTTTTGATCCATTCAACTCAACTATTAAGCCGCCATCTAAGTATCCCGCATGATGATAAA
ATCACAGTCCAGCACAGCTTAATGAATCTTCTCATGAGGCAGATCCCTCTTCCGATTCTG
CTCCCAGCATCTTTCGATCATGTCCCGGAGCACCATACCTCCGCCTACAACGACGCAGAA
GAAAAATGGAAAACTCTTTTGTCATCACCAAAATCGTTTCCTGTCTACTCTCTACAAGTA
ACAGATGCAATTCCGTTCGTGGAATGCAAGTTCCAGTTTTCCAAGCCTCAGTTTACAATG
GAAGAGGTAATAGCACTGCATGTGTTCACACGTGTTACATGCCCTGCCCCATGCAAAATC
TCCAAGCTCTTAGTTCTACTCAACAACGGTACAGAGCTCTCTGTCGAAGAAAATGCAGAA
AAAGATGCGAAAAAATCAGACCTAAAACAGTATACACCATTTGAAATTAAAGAACACGTT
TTGAAATTTTTATGCAGCCCACACGAGAAACAGAATGTTCTAGAAGTCCGACAATTATCC
GTTCTGCTTGGCTCCAGTAATGGTCTAAGTATTGACCTGATATGGTCTGATCAGTTTGTG
GATGCCGCCACTGATCCAAAGCCTTCTTCCCCTTTCAGTATGGCTCAACTTGGAGGCGAG
AAATGCTGGGATGACATCTCTAACATCACTTCAACTGAGATTGTAGAGTGTCCCTCTCGC
TTGAAAGTAAATATCCTTCACAAAACTCCAGCTTTTGTGGGAGAGGCATACGCGATAGAC
ATCAAAATAAACTCATCAGAAAGCAATGATTTCACTGCAGAGAATGTTACAGCCGTTTTA
TCACTTAAACAAAATGAGAATTCTGAAACAGAAGCTCATCTTTCTGAAAAATGCTCTGAT
TTACACACTTCCAAAGCCAAATCTCTGCAATTAGCTTTAGGAAACATGGAAACCAACCAA
ACAATTGAAAGAACAGTATACGTACAGACCACGCAAGCATCTGTGCTCCACTTTTCCCTC
CACGTTTCTTACCAGATGCAAAAACCTTCAGAACTCCCCAAAACTGGTGTTCTGACCTGC
ACGAGCTCAGAGAGCATTGATTTTGCTGTTGAGGTTCTAACTCCATTCAATTTCACGGCA
CATGTCACTTCCTTGAACCTGGACTCGGTTTCAACTGTCAATCAAAATCAACCTTTTATA
GTTTTGGTCAATGTGTCGTCGGAAAATTTCTCTCCTATTCAAATTAATTCATTTTCTTTG
CACCTTAACGAAAATGATGGTTTCAAAACTGCAGGTGAACAGAGTCCAGCGTTGGATGGA
AAAGTACTTCAACAGCGAGAATGCGCTGTAGGAGCCTTTACAGTCCTCTGTGACAAGTCC
CACGACCCTAGTACTTCGTTTTTAATCGGTTCTTGTACTTTTGAATGGTCTCGTTTCGAA
TCCGAAAACCCTGCTCAAAAAGTGACACTCCAGCGAAAACTTCCAAGCATTTTAGTCAAA
TCCAGCCCAGTTTCTATAACCGCCGCTGTTCCCGCTTTCGGGCACCTGCGACAGAAGCTG
ACCATTACATATTCGTTAAAAAGCCACATCTCGGAGCCTCAGACTATAGAAATCAGCTGT
GAGGGCTCTGACGCTTTCATGTTTTCCGGTACGAAAAATTCCACAGGTTTTCTTGCACCA
GGTGAAGCTCACAACTATTCATACAACTTTTTCCCGCTAGCTATCGGCTACCAAGAGCTC
CCCAGGTTCATGGTTTCATGCACCAAGCATGCTGAAGATGAAAAAGCAGCGCAAAAAGTT
GACCAATATCCACAAAACCGATTTATTTTTGTTAAACCGCTCACTGAAAAGCAATTGTAG
TTTTTTGACGCATTCTTTTTTTTCGCTAATTTTTACTTAAAAAATAAAATGCAAATATAT
ATATATATAGATATCATTCTAGATTACATAGTGATTTCGTAATGATCGCAATTCGCTAAT
ATATTGAGTAACACATATAATATAGACGTAGATAAATATTTTAAATGTTATTCTTTTAAG
CTATTACGGTCTTTTGAATTACTTCAAAAATTCTGTCTTTCTGATTTATTTCTAAATATT
TTGCTTGTAATTAAACCATTGTCACAGCCAGGCTTTTAAACAACCCTTTGATAAACTTTA
GGTGCCAAAACTAGGCTGGTAAAATTTTTTACACTACATTTATCAGTAAACA

InterProScan

Pfam
Foie-gras_1 (IPR021773) - T[75-331] 3.4E-57
Pfam
TRAPPC11_C (IPR025876) - T[858-903] 3.2E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TPC11_HUMAN 36.638 % 564 0