- Transcript 'KH2012:KH.C4.531.v2....' >
- Transcript 'KH2012:KH.C5.81.v2.A...' >
- Transcript 'KH2012:KH.C1.878.v1....' >
- Transcript 'KH2012:KH.L18.39.v2....' >
- Transcript 'KH2012:KH.C12.169.v1...'
Transcript Model
Transcript Id
KH2012:KH.C12.169.v1.R.ND1-1
Possible name(s)
MATR3; RBM20
Gene model
Location
KhC12 [3,796,684 / 3,807,092]
Amino acid sequence
Length: 1,194
>KH.C12.169.v1.R.ND1-1
MNPPVKSKFNALAAVRLMVQSDEDDDDDDKYGKDDIIFTDSCTPSVPCGSSTGKPLKSIL
KPSKIYTPPEIHERNIKAEEENQPNVVSLSVTGAPKLNRGIGQLLAQLKCEPNPIKTEVQ
HNDGFQNTAAISIKQEPLFKSALNTVQNKELRNNSPAPNNVNELLHVDKKDSSITKINVA
SNDLHNIVKISGLPEEFSKNKLISFLGIWPSNGQDGIRVIHGSSTGYAYVLLENHNNKMD
ILKANGMKFDDVFPLNMVVCKFSDMEKDWKRTCLIKMHIEGSPFVCISGLGSNTTKDHLL
EELNAYHRSMEDIFYIPESSESAYVVFDSVELAVDFLKDAFCIRGRRVKTHQCHPLIVQR
WCRKNNIVFALPPGNKCDLKDLSPLYGSEQEIKELLVPKRAASVRTMEKQIPKLDTAYAD
RIKSEPNSQAHVPNPDKQMVDPLTLERKQFRNQILNQLHDGMVLPPPVNNANRFPIFGQP
FQRESRDIRQVRDRTPPMEIQRRMGMGYPRHMGPMGERWMPPREFSPGRHQSQQFVRDRS
PGRGWHHPDDMTFGIGMDVMNFDHGRDPQVDLGLRRGPPRYLSPRRDFPNESSLRREHLR
DLSPRRNFPRDSSPRREPPRDTGSRRDLIRDLSPNRGPPRDLRGDLSRDLSPRKRRSLSR
DLGSKRRRRRSLSRHSSPRRGQPRDLSPRRRGSPSRDSLPRRGLSPRREISRDLGPKRRR
SLSRHSSPRRSQPRDLSPRRRKRSLSIDSNPRRSPPRDLRRSSPSRRRAGSLGPRRDKSP
SKSRYFSREERQHRDLDQRSTKLNSRESLQRRRKCSGSPKRERKPYHDLSPRRRRRYSRE
TSPRREHGASREKHLRERSPTRDRIIVIKKEENKNFQKKKIQLKEKSPEKKINKIIESTV
KEVKPKVKKSLNNMNFMGPGHPFGPHMPPMGMGPMVMGARGPMPFMGPMMPPPNFRPRPM
NMRPPMGMIRPGIPPNMRHLRPPAPGMMMSIYIRAFNIPDQASTEDIREFFAPVLPAKIA
QNIGYNIYDIDFYSPADASMALQKSGMLIRKNKIQLQMLPGPPIPLPPRPFKKKKKRTSS
SPPPEGKDTNSQTDSLPPKTTIKQEPTDADTVKADEEQIPVEPFPDDPFKYRLPPFDPDV
PAGQCAIEPMEGFYCQLCRKFYRSRITAFSAHCKSKQHYDNLKAEMKKIKQEVS
Nucleotide sequence
Length: 3,815
>KH2012:KH.C12.169.v1.R.ND1-1
ATGAACCCTCCTGTTAAATCGAAATTTAATGCTCTTGCGGCTGTGCGTTTGATGGTGCAG
TCGGACGAAGACGACGACGACGATGATAAATACGGCAAAGACGATATCATTTTCACGGAT
AGTTGCACACCTTCCGTTCCTTGTGGTTCTTCCACTGGAAAACCTTTGAAAAGTATTTTA
AAACCTTCAAAGATCTATACACCACCAGAAATACATGAACGAAACATCAAAGCAGAAGAG
GAAAATCAACCAAATGTAGTAAGCCTGTCAGTAACAGGTGCCCCAAAACTAAATCGTGGT
ATTGGTCAACTGCTGGCTCAATTAAAATGTGAACCGAATCCAATAAAAACAGAAGTACAG
CATAATGATGGATTTCAGAATACCGCCGCTATATCGATCAAACAAGAACCTCTCTTTAAA
TCAGCATTAAACACAGTACAAAACAAAGAATTACGCAACAACAGTCCTGCACCAAACAAT
GTAAATGAACTTTTGCACGTTGATAAAAAGGACAGTTCAATTACCAAGATCAATGTGGCA
TCAAATGATTTACACAACATAGTAAAGATCTCTGGATTACCTGAAGAGTTTTCAAAAAAC
AAATTGATATCATTTTTAGGAATATGGCCTTCTAATGGACAAGATGGTATCAGAGTCATT
CATGGCTCATCTACTGGCTATGCTTATGTTTTGCTGGAAAATCATAACAACAAAATGGAT
ATATTAAAAGCAAATGGAATGAAGTTTGATGATGTTTTCCCACTAAATATGGTTGTATGC
AAATTCTCTGATATGGAAAAAGATTGGAAACGTACATGCTTGATCAAAATGCACATAGAA
GGATCACCGTTTGTCTGCATATCTGGGTTGGGATCAAACACCACTAAAGATCATCTGCTT
GAAGAGTTAAATGCTTACCACAGATCCATGGAAGATATCTTCTATATACCTGAGTCTTCT
GAATCAGCGTACGTGGTGTTTGACTCAGTTGAGCTGGCTGTTGACTTTCTTAAAGATGCT
TTCTGCATTCGAGGAAGGAGAGTCAAAACACACCAATGCCACCCTCTTATAGTTCAACGT
TGGTGTAGAAAGAACAATATTGTGTTTGCATTACCACCTGGTAATAAATGTGATCTTAAG
GATCTCTCTCCTTTATATGGATCAGAACAAGAAATAAAAGAATTGCTGGTACCCAAGCGT
GCTGCATCGGTACGAACTATGGAAAAGCAAATACCAAAATTGGATACAGCGTATGCAGAT
AGAATTAAGTCTGAGCCAAACTCACAAGCTCATGTTCCGAATCCTGATAAACAAATGGTG
GATCCCCTGACTTTGGAAAGAAAACAATTTCGGAATCAGATTTTAAACCAGCTGCATGAT
GGAATGGTTTTACCTCCACCTGTTAATAATGCCAACAGGTTTCCAATTTTTGGTCAACCA
TTTCAAAGAGAATCGAGAGATATTCGGCAGGTTAGAGACCGCACCCCACCGATGGAGATT
CAGCGTAGAATGGGTATGGGTTACCCAAGACATATGGGGCCAATGGGCGAGAGATGGATG
CCTCCAAGAGAGTTCTCACCTGGAAGACATCAGAGTCAACAGTTTGTAAGAGACCGTAGT
CCAGGAAGAGGATGGCATCATCCGGATGATATGACCTTTGGAATAGGTATGGATGTCATG
AATTTTGATCATGGGAGAGACCCACAAGTGGATTTGGGTCTAAGAAGGGGTCCTCCAAGA
TATTTAAGTCCTAGAAGAGATTTTCCAAATGAATCAAGTTTAAGAAGAGAACATCTGAGA
GACTTAAGTCCAAGAAGAAACTTTCCAAGGGATTCAAGTCCAAGAAGAGAACCTCCAAGA
GATACAGGTTCAAGAAGAGACCTTATAAGAGACTTAAGCCCAAACCGTGGTCCTCCAAGG
GATTTAAGAGGAGATCTTTCAAGAGATCTAAGTCCCAGAAAAAGAAGAAGTCTTTCAAGA
GATTTGGGCTCAAAAAGAAGAAGAAGAAGAAGTCTTTCACGACATTCAAGTCCTAGAAGA
GGTCAGCCAAGAGATTTAAGTCCCAGAAGAAGAGGAAGCCCTTCAAGAGATTCACTTCCT
AGAAGAGGTTTAAGTCCAAGAAGAGAAATTTCCAGAGATTTGGGCCCAAAAAGAAGAAGA
AGTCTTTCTAGGCATTCAAGTCCTAGAAGAAGTCAACCAAGAGATTTAAGTCCAAGAAGA
AGAAAAAGAAGTTTGTCAATTGATTCAAATCCTAGGCGAAGTCCTCCACGAGATTTAAGA
AGAAGTTCTCCAAGTAGAAGAAGAGCTGGTAGTCTAGGTCCAAGAAGAGACAAAAGTCCT
TCCAAAAGCAGGTACTTCAGTAGGGAAGAAAGACAACATAGAGATCTGGACCAAAGAAGC
ACTAAACTAAATTCCAGAGAATCTCTACAACGGAGGAGGAAGTGTTCAGGAAGTCCTAAA
CGTGAAAGAAAACCTTATCATGATCTAAGTCCTCGCAGACGTCGGAGGTACTCTAGGGAA
ACCAGTCCTAGAAGAGAACATGGAGCATCAAGGGAAAAGCATTTAAGGGAAAGGTCCCCA
ACAAGGGATAGGATAATTGTGATAAAGAAGGAGGAAAACAAGAATTTCCAGAAAAAAAAG
ATTCAGTTGAAAGAGAAAAGTCCCGAAAAGAAAATTAATAAAATAATAGAGTCTACTGTT
AAAGAAGTCAAACCAAAAGTAAAAAAATCTTTGAATAATATGAATTTTATGGGTCCAGGA
CACCCTTTTGGCCCGCATATGCCTCCAATGGGCATGGGCCCTATGGTTATGGGAGCAAGA
GGACCTATGCCTTTCATGGGCCCAATGATGCCACCCCCAAATTTCAGGCCAAGACCAATG
AACATGAGGCCACCAATGGGTATGATAAGGCCAGGCATACCACCAAATATGAGGCATTTA
AGACCACCAGCTCCAGGTATGATGATGAGTATATACATCCGAGCATTTAATATTCCTGAC
CAAGCATCTACAGAGGACATACGAGAATTCTTTGCACCTGTACTGCCAGCAAAAATCGCT
CAGAACATCGGATATAATATTTACGACATTGATTTCTACTCGCCTGCTGATGCAAGCATG
GCTCTTCAGAAGAGTGGAATGCTGATCAGGAAGAACAAGATTCAGCTTCAGATGCTCCCA
GGTCCTCCAATCCCCTTGCCTCCTCGTCCATTTAAGAAAAAGAAGAAAAGAACGAGCTCC
AGCCCTCCTCCAGAGGGCAAAGACACAAATTCACAGACAGATTCATTGCCTCCTAAAACA
ACTATTAAGCAAGAACCAACTGATGCTGACACAGTTAAAGCAGATGAAGAACAAATTCCG
GTTGAACCTTTTCCTGATGACCCTTTCAAGTACAGACTACCACCATTTGATCCAGATGTA
CCTGCTGGTCAGTGTGCTATTGAACCCATGGAGGGCTTTTATTGTCAATTGTGCCGCAAG
TTCTACCGCTCAAGAATCACTGCGTTTTCAGCGCATTGTAAATCCAAGCAGCATTATGAC
AACTTGAAAGCTGAGATGAAAAAAATAAAGCAAGAAGTTTCATAAACACTGTAAAAGCTT
ACCATAACTGCCATGCGAAATGTGAAAGTACTCTAATATCTAGGTGCACACTTCCTCTGT
TCAATGCTGCGTTCAATGCTGCTTCCTTTGTTCAATGCTGCAAGGACATTTAATAAAGAG
ACAAAATGTTCTAATATGGTACAAATCGAAATGAATCTCTAAGCAGTTGACAGTCTGGTT
CGCAATCAACAAAATCATATTTAAATACAAAAACA
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[284-352] 7.08E-5 - T[949-1067] 9.92E-6 |
| PANTHER |
CIZ1 (IPR026811) - T[451-1192] 2.0E-145 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[1148-1192] 2.62E-6 |
| SMART |
Matrin/U1-like-C_Znf_C2H2 (IPR003604) - T[1150-1185] 2.8E-6 |
| ProSiteProfiles |
Matrin/U1-C_Znf_C2H2 (IPR000690) - T[1153-1184] 9.283 |
| Protein Name | Identity | Bit Score | e-value |
|---|