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TRANSCRIPT CARD

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  1. Clone 'cien89754'
  2. Transcript 'KH2012:KH.C12.142.v1...'

Transcript Model

Transcript Id

KH2012:KH.C12.142.v1.A.SL1-1

Possible name(s)

KH.C12.142

Location

KhC12 [2,526,494 / 2,529,989]

Sequences

Amino acid sequence

Length: 302

>KH.C12.142.v1.A.SL1-1
INNKMAENHVTGSFTLKTGFAKMMKGGLIMDVINAEQAKIAEAAGACAVMALERVPADIR
KMGGVSRMSDPKMIKEIIAAVSIPVLAKVRIGHMAEAQILEALGVDMVDESEVLTMADEE
NHIDKHQFKTPFVCGARNLGEALRRISEGAAMIRTKGEAGTGNVVEAVRHARAISRQIRL
AQAMDASELYSFAKEIQAPVELLRETAKLGRLPVVNFAAGGLATPADVSMLMQLGVDGVF
VGSGIFKSNCPKKRADAMVQAVIHYKDPKTLAAISEDLGEAMVGINCEDLKEVWATREAK
TN

Nucleotide sequence

Length: 1,325

>KH2012:KH.C12.142.v1.A.SL1-1
GTTTTACATTAGTTTTTGTATAGCTCTCTAGTAAATAAACAACAAGATGGCAGAAAACCA
CGTAACTGGCTCTTTCACATTGAAAACTGGTTTCGCTAAGATGATGAAAGGCGGTCTTAT
CATGGATGTAATAAACGCCGAGCAGGCAAAGATTGCAGAAGCTGCAGGCGCATGTGCGGT
TATGGCTCTCGAGCGCGTTCCAGCGGATATTCGCAAAATGGGAGGTGTTTCGAGAATGAG
CGACCCAAAGATGATTAAAGAGATAATAGCAGCCGTATCAATACCTGTCCTGGCAAAAGT
ACGAATCGGGCATATGGCCGAAGCACAAATTCTTGAAGCGCTTGGAGTTGACATGGTTGA
TGAATCGGAGGTGTTGACCATGGCTGACGAGGAAAATCACATCGACAAACACCAGTTTAA
AACTCCATTTGTTTGCGGAGCAAGAAACTTGGGGGAAGCACTGCGCCGTATCTCAGAGGG
AGCGGCTATGATTCGTACCAAGGGCGAAGCTGGGACAGGAAACGTAGTTGAAGCTGTACG
TCACGCGCGCGCAATTTCGAGACAGATACGTCTAGCACAGGCGATGGATGCGTCAGAGTT
GTATTCATTTGCTAAGGAAATTCAGGCTCCTGTAGAACTTCTAAGAGAAACCGCAAAGCT
TGGGCGCCTCCCAGTGGTGAATTTCGCCGCCGGGGGACTTGCGACACCTGCCGACGTATC
GATGCTGATGCAACTTGGGGTAGATGGCGTCTTTGTCGGATCAGGAATCTTTAAGAGTAA
CTGCCCTAAAAAACGTGCTGATGCAATGGTACAAGCTGTCATTCATTATAAAGATCCCAA
GACGCTTGCAGCGATCAGTGAGGACCTCGGAGAGGCCATGGTTGGAATTAATTGCGAGGA
TTTGAAAGAAGTTTGGGCAACACGTGAGGCAAAGACCAACTGAAAACCTTTCGAATGAAA
ATGGTGTAGAATACGCGCTAACTGGGTACATTCTAACGGTCTACTTCAACGTAACTTCGC
TTTGTAAATGCTTCAATAAAAGTGTACCATAAGCCTCAATGGACTTAGTGTACAAACTTT
CAGTACATGTTTATCACTTTGATCCCTACATTACTAAATGCAGGGCGACAGTTTATAGAA
ATTTAAACCATCAAATATTTACCAATTTAAACAACCAAGAAGTTATTTTCTTACTTGTAA
ATACAATTCTGACGAATTAAAAGCAAGCTTTTGTAACAGGATAGGGGTGCGTGGAACTCC
TTTTCGTTCCATATTTGTTAGCATAAAACATACAAAGAATTACAAAACCTTATCCTTACG
ACTCC

InterProScan

PIRSF
PdxS/SNZ (IPR001852) - T[2-300] 3.6E-148
Gene3D
Aldolase_TIM (IPR013785) - T[5-301] 1.3E-144
PANTHER
PdxS/SNZ (IPR001852) - T[6-292] 1.3E-151
Hamap
PdxS/SNZ (IPR001852) - T[11-299] 48.89
Pfam
PdxS/SNZ_N (IPR033755) - T[14-219] 8.7E-108
TIGRFAM
PdxS/SNZ (IPR001852) - T[16-292] 5.9E-141
ProSiteProfiles
PdxS/SNZ (IPR001852) - T[16-299] 145.652
CDD
PdxS/SNZ (IPR001852) - T[18-292] 0.0
SUPERFAMILY
RibuloseP-bd_barrel (IPR011060) - T[25-274] 4.0E-65
ProSitePatterns
PdxS/SNZ (IPR001852) - T[212-230] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value