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  1. Transcript 'KH2012:KH.C12.128.v1...'

Transcript Model

Transcript Id

KH2012:KH.C12.128.v1.A.SL1-1

Possible name(s)

ATG2A; ATG2B; VPS13C

Location

KhC12 [89,926 / 105,846]

Sequences

Amino acid sequence

Length: 1,875

>KH.C12.128.v1.A.SL1-1
LVYFLCLFNLRPTMPWLPFPESIKKRACRYLLQHYLGKFLQEKLRLDQLSLDLYSGKGCV
ENVMLDVYSVNELLTQFHVPIEMVSGDIASISVMIPWSNLLSENCIVEIKGLHIKVAMNH
QRPANFADMTDSFYESYGSMSTSMQLAQECFKQQEEDIKQNKDSGSMFEGLELFAKTIEN
ILSRVKIKFSDVKFGFEHFNYQSNKRIRLELSINELQYFDEVTMNSQQTNQPTFNEGTEH
LTNLLNQTITNSCKRFQISGLDLHMTSIIDQEGEEMIYDMSPTLIASCYGKHELKVRIKH
KEQIPGPKMELDFFIGSCFIHLLINVLQEISEPLGGGISHRDSAFSLDRNIQAPDVAPPG
RGREERFYLMSASSTLYQVNGDSQCGEMSGTSCGSSCSSAGESVDPAQFNMERKKRGRRK
GRTSESAGVDCVSFQSQLDFSLLVVTVLHVDPIFRGQKVGKDDLKGACGASSYLSEIASK
YFKKAETGVDGDLFENRAKMSGWCETHDHLRFVGRPVHVQHQQKEGGASHLASLHVSASL
GDVDFVECLRRTEEDQGSSWKFNQILAFNERNPSEKSLQINIDREELKHSIHNDVKIQLA
DCTCEVDISIVDRLSTLLNYPCSGMGSAGQYSLYRTSGNNQSIFQKVLDEDAERKIILLF
PIPDLRSEMDRRPWFKQSIREEQMHCMLHELQLSTQFVNQGVYAGVEFVQEICCVTITLV
VTQVTIQPPQPPDFNPNFTLYETTNNSTFPPSDQNTGSYWQNTSVFGLGENGLNEEISPF
SKRKVVYVNEDVVMPGNCDEIQTFTSHATQTSSLSLDVYLPHVVATLHSKDFLENIYNRI
GNDLLLWRPAAPQPFGASTFTSTILPTTLPHQPIFDPNMRPKFFACNSRWVHGSDSDYSD
DAVPPYKETLRESFSKKESSIAVTLNINQGSVTANCAKGQLILGETSAMVYTHTTLYPQI
ENGSLFYVGGYEGDSNLDYVCIDMEGCWLFYKENGRTSFNLPSTSTPSNMETIIFPTSSM
VNMCFNKGRHSSGDGRDRMVTMVVKLDYEQPSLKHCVLSTLLSGATLHHKFVQQDVNWLN
QITDFFDLTDHEVLGYKPPSIITQLHLHFDRCCVKYHPPSCPVGALATLHSFSLSSNMVA
GSPSSLLHILIDNASLFLTKSDAREVRSMKDYVCVVEVGLLEVCLKINNSTKQTDNGKMM
KHPLIDLSIFNNKVKIQTCSDSFGALFTIIKKFVEEMEASMNKQTNVMTSQSIHTSHDDV
IIKSTEEVCLHTVSDLLADAMVDVETDDVITSVQSVSQYLFHPLHRSPEHVLLTSHATDQ
VRCGFKIMTPDEFMTSTSFEPDDTQFCIIEDPGFGGFNENEPEVRYIIDDDVISYHENHF
TPVLGKTDQLSAPDSFSPPEMRYSVKDLTCVWMMYGGCDFTTIDGKTKDTKMKLRDENTL
MEFHLSKVRFRHEIYGEESKEAARTVLIVTEFEIRDRLQTSQINKFLYQFHSEASPKQSQ
ANMLIVKALQYKPEKSGSSIECKLKVSLQPLRLNVDQDALDFITKFFDSVSILISKSDSD
VTEHTVPHELVANPPVIKTATDDAHEAVEGEGEDTTDASQTPLFFREIIFSPEVPIRLDY
HGKHIDTDQVGTLAGLLMGLGQLNCSQLKLKKIIHRHGILGVDKMVTFMLNEWAGDIRKN
QLPSILGGVGPLHSVVQFFQGVHDLVVMPVEQYKRDGRIVRGLQRGTSSFGASATMATLE
LTNRMVWLVQKAAETTYDVVSPPQLHRQQNWRNLGPHASRHKQPNDIREGFNNALTVVRS
GVSDAAYSIARVAQEEHEQKGITGAVGGVLRHLPPTLVKPVIIASEATSNVLSGMRNQIL
PDAKREDDEKWRNAS

Nucleotide sequence

Length: 6,419

>KH2012:KH.C12.128.v1.A.SL1-1
ATTAACTCGTTTATTTTCTTTGTTTGTTTAACTTACGCCCTACGATGCCTTGGTTGCCGT
TTCCCGAGTCAATCAAGAAGAGAGCGTGTCGGTATTTACTTCAGCATTATCTGGGAAAGT
TTCTACAGGAGAAACTCCGTCTTGATCAACTTAGCTTGGACCTCTACAGTGGGAAAGGTT
GTGTTGAAAACGTGATGCTAGATGTTTATTCAGTGAATGAATTGCTCACACAGTTTCATG
TTCCTATTGAGATGGTATCAGGAGATATTGCGTCAATATCTGTGATGATACCATGGTCTA
ATTTATTAAGTGAGAACTGCATAGTAGAGATAAAGGGACTTCATATAAAGGTAGCTATGA
ACCACCAACGGCCCGCCAACTTTGCTGACATGACTGACTCGTTCTACGAATCATACGGCA
GCATGTCAACCTCGATGCAGCTTGCACAGGAATGTTTCAAACAACAGGAAGAAGATATTA
AACAGAACAAAGACAGCGGTTCAATGTTCGAAGGGTTGGAATTATTCGCAAAAACAATCG
AAAATATTTTGTCTCGGGTGAAAATCAAGTTTTCTGATGTAAAGTTTGGGTTCGAACATT
TTAATTATCAATCAAATAAACGGATCAGACTGGAGTTATCCATCAACGAACTTCAGTATT
TTGATGAAGTGACAATGAACAGCCAACAAACCAACCAACCCACATTTAACGAGGGAACCG
AACACCTCACCAACTTATTAAACCAAACCATCACCAACTCATGCAAGAGATTCCAAATAT
CGGGCCTTGACCTTCATATGACCTCCATTATTGACCAGGAGGGCGAAGAGATGATATACG
ACATGTCACCAACATTAATTGCATCGTGTTATGGTAAACACGAGTTGAAGGTTCGTATAA
AACATAAAGAACAAATACCTGGACCAAAGATGGAGTTGGATTTCTTTATCGGGTCGTGTT
TCATCCACCTTCTTATCAACGTCCTCCAAGAAATATCCGAGCCACTTGGTGGCGGTATAT
CACACAGGGACAGCGCGTTTAGTCTGGATCGGAACATCCAAGCCCCTGATGTTGCTCCCC
CTGGTCGTGGAAGGGAGGAGAGGTTTTACTTGATGTCGGCGTCATCCACGTTGTACCAAG
TTAACGGTGACTCACAGTGCGGGGAAATGTCGGGCACGAGTTGTGGAAGTAGTTGTAGTT
CAGCTGGTGAGTCCGTAGACCCCGCGCAGTTTAATATGGAGCGCAAGAAGCGGGGTAGAA
GAAAAGGCAGGACATCGGAGTCAGCGGGGGTGGATTGTGTTTCGTTTCAATCGCAGTTGG
ACTTCAGCTTGCTTGTTGTTACCGTGTTACATGTAGACCCAATATTTCGTGGCCAGAAAG
TTGGTAAAGATGACTTGAAAGGGGCGTGTGGTGCGAGCTCGTATTTATCGGAAATTGCGT
CAAAGTATTTCAAGAAAGCTGAGACGGGTGTGGACGGTGATCTGTTTGAAAACCGAGCGA
AAATGTCAGGTTGGTGTGAGACGCACGATCATCTAAGGTTTGTGGGACGTCCTGTGCATG
TACAACACCAACAGAAGGAAGGAGGAGCGTCCCATCTTGCATCCCTCCATGTATCAGCAT
CCCTGGGTGATGTGGACTTCGTGGAGTGTCTACGGCGGACCGAGGAAGATCAAGGATCCT
CGTGGAAGTTTAATCAAATCCTTGCATTTAACGAAAGAAATCCTTCGGAGAAATCCCTTC
AAATAAATATCGATCGTGAAGAATTGAAACACTCGATACACAACGATGTTAAGATTCAAC
TTGCAGATTGCACATGCGAAGTTGACATCAGCATCGTGGATAGGTTAAGCACATTATTGA
ACTATCCATGCAGTGGTATGGGCTCGGCCGGTCAATACTCATTATACAGAACATCAGGAA
ACAATCAGTCGATATTCCAGAAGGTTTTAGATGAGGATGCTGAACGTAAAATCATCCTGT
TGTTCCCGATCCCTGACTTACGATCGGAGATGGATCGCAGACCTTGGTTCAAACAATCCA
TTAGAGAGGAACAAATGCATTGTATGTTGCACGAGTTGCAACTATCAACACAGTTTGTTA
ACCAAGGTGTGTATGCTGGTGTGGAGTTTGTACAAGAAATATGTTGTGTTACCATCACTC
TTGTTGTTACCCAGGTGACCATCCAACCCCCACAACCCCCCGACTTCAACCCAAACTTTA
CTTTATACGAAACAACCAACAACTCCACGTTTCCACCTAGTGACCAAAACACGGGCTCAT
ATTGGCAGAATACTTCGGTGTTTGGGTTGGGAGAAAACGGGTTGAATGAAGAGATTTCAC
CTTTTTCTAAACGGAAAGTTGTTTATGTGAACGAGGACGTGGTGATGCCGGGCAACTGTG
ATGAAATCCAAACTTTTACATCGCACGCCACACAAACCTCATCCTTATCATTGGATGTCT
ACCTCCCTCATGTGGTGGCTACTCTGCATTCAAAAGATTTCCTCGAGAATATTTACAACA
GGATCGGCAACGACTTGTTGTTATGGCGACCCGCAGCCCCCCAACCTTTTGGAGCATCTA
CCTTCACCTCAACCATCCTCCCAACCACACTTCCACACCAACCAATATTCGACCCAAACA
TGAGGCCGAAGTTCTTCGCTTGCAACTCAAGGTGGGTACATGGTTCAGACTCGGATTATT
CCGACGATGCAGTTCCTCCATATAAGGAAACATTGCGTGAAAGTTTCAGTAAAAAGGAAA
GTTCGATTGCCGTCACATTGAACATCAACCAAGGGAGCGTGACGGCTAACTGCGCTAAGG
GACAACTTATACTTGGTGAAACATCTGCTATGGTATATACTCACACTACATTATATCCAC
AGATTGAAAACGGAAGTTTATTTTATGTTGGTGGATACGAAGGGGATTCCAACCTTGATT
ATGTTTGTATTGATATGGAAGGCTGTTGGTTGTTTTACAAGGAAAACGGTCGAACTTCAT
TTAATCTTCCATCGACGTCCACACCAAGCAACATGGAGACCATCATATTTCCCACTTCAT
CTATGGTTAATATGTGTTTCAACAAAGGTCGGCACAGTAGCGGTGATGGGAGGGACCGTA
TGGTCACCATGGTTGTCAAGTTAGATTATGAACAACCCAGCCTCAAACACTGTGTGTTGT
CAACCTTACTATCGGGGGCGACACTTCATCATAAGTTTGTGCAGCAAGATGTTAATTGGT
TGAATCAGATCACGGACTTCTTCGATCTCACCGACCACGAGGTGCTTGGCTACAAACCAC
CATCCATTATCACACAACTTCATCTCCATTTTGATCGATGTTGTGTCAAGTATCATCCCC
CATCGTGCCCAGTTGGTGCGCTCGCCACTCTTCATTCCTTCTCTCTATCATCGAACATGG
TGGCGGGATCTCCTTCATCATTACTTCATATACTCATCGATAATGCTTCATTGTTCCTCA
CTAAAAGTGACGCACGTGAAGTTAGATCTATGAAGGATTACGTTTGTGTGGTTGAAGTTG
GATTGTTGGAAGTTTGTTTGAAAATCAACAACTCAACAAAACAAACGGATAATGGTAAGA
TGATGAAACACCCCCTGATAGATTTATCCATCTTCAACAACAAGGTAAAGATTCAAACAT
GTTCCGATTCATTTGGAGCGTTATTCACCATCATAAAGAAGTTTGTGGAGGAAATGGAGG
CTTCTATGAACAAACAAACAAATGTTATGACATCACAATCCATTCATACATCGCATGATG
ATGTCATAATCAAATCCACAGAAGAGGTTTGTTTACACACGGTGAGTGACTTACTTGCTG
ACGCCATGGTTGACGTGGAAACCGATGATGTCATCACATCTGTACAAAGTGTTTCCCAAT
ATTTATTCCACCCATTACACAGGTCACCTGAGCACGTCCTACTCACCTCTCATGCAACAG
ACCAAGTAAGATGTGGATTTAAAATAATGACCCCTGATGAGTTCATGACCTCGACCTCAT
TCGAACCCGACGACACCCAGTTCTGCATCATCGAGGACCCCGGGTTTGGGGGGTTTAACG
AGAACGAGCCTGAGGTGCGTTACATCATCGATGATGATGTCATCAGTTACCATGAAAACC
ACTTTACCCCCGTCCTGGGGAAGACGGATCAACTCAGCGCTCCGGATTCCTTTTCCCCCC
CTGAGATGAGATACTCAGTGAAGGACCTCACATGTGTATGGATGATGTATGGGGGTTGCG
ACTTCACAACTATTGACGGGAAAACTAAAGACACAAAGATGAAGTTGAGAGATGAAAATA
CTTTGATGGAATTTCATTTATCAAAGGTTCGATTCCGACACGAGATATACGGGGAGGAAA
GCAAGGAAGCCGCTCGTACCGTGCTCATCGTGACAGAGTTCGAGATCAGAGATCGACTCC
AAACATCACAGATAAATAAGTTCCTTTACCAGTTCCATAGTGAAGCAAGTCCCAAGCAAT
CACAAGCAAACATGCTTATTGTGAAAGCTCTACAATATAAACCCGAGAAGTCGGGAAGTT
CCATTGAATGCAAGTTGAAGGTCTCCCTCCAACCACTGAGGTTAAATGTTGATCAAGATG
CCTTGGATTTCATCACAAAGTTTTTCGACTCAGTTTCGATTCTGATCTCAAAGTCAGATA
GTGATGTCACAGAGCATACTGTTCCTCATGAATTGGTGGCCAATCCTCCAGTGATAAAGA
CGGCGACAGACGATGCGCATGAGGCAGTGGAAGGTGAGGGTGAGGACACCACTGACGCAT
CACAAACACCTTTATTCTTCCGTGAAATTATTTTCTCCCCTGAAGTTCCAATCCGACTTG
ATTACCACGGGAAGCATATCGATACTGACCAGGTAGGTACATTAGCAGGGTTGTTGATGG
GGTTGGGGCAGCTTAATTGCTCACAACTTAAACTAAAGAAGATCATCCATCGACATGGGA
TCCTTGGTGTGGATAAGATGGTAACCTTCATGTTGAATGAATGGGCGGGAGACATCAGGA
AGAATCAACTGCCTTCCATACTTGGTGGGGTTGGTCCTCTACATTCGGTGGTTCAATTCT
TCCAAGGCGTGCATGACCTTGTTGTGATGCCAGTTGAACAATACAAGAGAGATGGGAGGA
TTGTGAGGGGGTTGCAACGTGGAACATCTTCCTTTGGTGCTTCAGCTACGATGGCAACAT
TAGAATTAACCAACAGGATGGTATGGTTGGTGCAGAAGGCTGCAGAGACGACGTACGATG
TTGTTTCACCCCCTCAACTTCATCGTCAACAAAACTGGCGTAACCTCGGCCCTCATGCGT
CGAGACATAAACAACCCAATGATATTCGTGAAGGTTTCAACAACGCGCTTACTGTGGTTA
GGAGTGGGGTGTCAGATGCTGCGTATTCTATCGCACGAGTCGCACAAGAGGAACACGAAC
AGAAAGGCATCACGGGTGCGGTGGGCGGTGTGTTGCGTCATCTACCCCCCACCCTGGTTA
AACCAGTGATCATCGCATCGGAGGCAACATCCAATGTTCTGAGTGGGATGCGGAACCAGA
TCCTTCCTGATGCTAAAAGGGAGGACGATGAAAAGTGGAGGAATGCGTCGTGATCTTGTG
CTGGCTGTTGGAATAAGCCAAACTTTTGCAACTGCTTCACTTGACTTTGAACGCCTCCTC
CTTTATTTTACAACTGGTGGAATCAAGCGAACTTTGGGAAACACGTTGCTGATTTTCGTG
CAATTCGTTTAACACTGTGACGATACACTGTTTGTGATGTCACTGTTACAAACAATCACC
TCCATCCAGATTGGAAAGAAGCACGGGGGATTTCAAATTCTGCAGAATATTGCTAACCAG
GAAGGCAATCTACTCACAGGTCGTTTGTAATCAATACCGGATAAAACTTTAATCAATCAG
CGCAAAAATTGGTGCAAATCCATCATTTCGAAAGGAAAACTGTGCAAGAAATAAATCTTT
TCAGTCTGAACCATCATTATTTATGATGTCACAATAGGGATTGTTTAAATCACAAACGGT
GCTGTTGTAACTTAAATAATACTAATACTGGAAGTTTGGAAATATCTGGCCATTCATAAA
ATAAAGTTACTTTCACTCCATGTTTTATGTTTGTTAGCAACTTATTCATGGTGACTTATC
TGTTTTGTATTTTGTTTCCATTTAATGCAGAACGATTGTTACTAAGTACACATTGGTAAA
TTATTATGTGGCAACTTTATATTCAGTACTGCAGTAGAAACGGCTGGCAACACTGTAAGA
TTGCAGTAACTAAAGGATTTCTAATGTGGAAGAGTGCACCTCCAAAATATAAGCATGACA
ACGCATAAATACTGAATGCGATAGTAAACCCACCGATCTTTGCCACTCAATCTAAAGGT

InterProScan

PANTHER
ATG2 (IPR026849) - T[18-1873] 0.0
Pfam
VPS13_N (IPR026854) - T[28-121] 1.4E-17
Pfam
ATG2_CAD_motif (IPR026885) - T[1108-1233] 5.3E-5
Pfam
Autophagy-rel_C (IPR015412) - T[1780-1872] 3.7E-27

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ATG2B_HUMAN 36.714 % 691 0
ATG2A_HUMAN 32.209 % 851 0