- Transcript 'KH2012:KH.C12.118.v1...'
Transcript Model
Transcript Id
KH2012:KH.C12.118.v1.A.SL1-1
Possible name(s)
FBXL2; FBXL20; FBXL4
Gene model
Location
KhC12 [4,122,238 / 4,127,679]
Amino acid sequence
Length: 656
>KH.C12.118.v1.A.SL1-1
LSGDNSRKNNEHSLKMKQHGPKYIKQYAVGIIDYSSQYGGENRRSFSYSVSNIMGEPQIF
PKYGDFTQAAVMRTYGPWWEKCSSPSFKKDHRPRAFPFTSQDYIDVVFDQAVYPWSIAIY
ETYNPGSLVRILALCQRFPKQTAKSDKNNNVGTDPDIQGKAIPLPLTNGFTHWEVLWDNP
HPQSNLPNEARMFAPILREIKHRSRIIRLEFCHSHLDYYAELDAVELTGTLEFSGSSAVD
PPSGSLSNMRITQPSTSTMTPSFSSEDLIFSESKIDYSLSSNVDPEPPSESDASCSEEEE
PIQFSHPGGMFSLLPAELTSKIFSYLPFPDICRAAQVCSVFHDHSYDPSQLTCLNLHTYW
HMVNENTLKGIVNRCQNGCTVQTLNMRWVGGGDIISPDHFNWFFRSCNLSSLSYLDVGSS
PCITDEVLTTMTAVLPGLNHLNIESCDKPSSEGLRVLHKLKQLETLNLYRTKVDDAGIIC
VLHSNNNLQSLNLGSCQQITDYDRVFCEIAAHCKQMRIIDAWRARSLTSRGLNELAKNCQ
FLEELDFGWCGTLQSSTGCFTYLARCCPNLKKLFLTANRTVADAEIRMLAEYCIKLRQLD
ILGTRQVSVAAVELLLHQCKDLQFLDLSFCFSFTVDVVNRLRTMFPGVAIKRSFQE
Nucleotide sequence
Length: 2,255
>KH2012:KH.C12.118.v1.A.SL1-1
TTTTTGGCACCTAGTCAGGGAATTTAGCTCTCTGGGGATAATAGTAGAAAAAACAATGAA
CATAGTTTGAAAATGAAGCAACACGGTCCGAAATATATCAAACAATACGCTGTCGGAATT
ATCGACTACAGTTCCCAATATGGCGGGGAAAATCGGCGTAGCTTTTCCTACTCAGTCAGC
AACATAATGGGAGAACCTCAGATCTTCCCTAAGTATGGTGACTTCACACAAGCCGCTGTT
ATGAGAACTTATGGGCCTTGGTGGGAGAAATGTAGCTCGCCAAGTTTTAAGAAAGATCAT
AGGCCGAGAGCTTTCCCATTCACAAGTCAGGATTACATTGATGTTGTATTTGACCAAGCT
GTCTACCCATGGTCCATAGCAATATATGAAACCTACAACCCAGGATCCTTGGTCAGAATA
TTAGCATTATGTCAACGATTTCCAAAACAAACAGCTAAAAGTGATAAAAACAACAACGTG
GGTACGGATCCGGACATACAAGGGAAAGCAATTCCTCTTCCTTTAACCAATGGTTTCACG
CATTGGGAGGTTCTATGGGACAACCCGCATCCACAGTCCAACCTTCCTAATGAAGCTCGG
ATGTTCGCTCCCATCCTCCGAGAGATTAAACATCGGAGCAGGATTATAAGACTCGAGTTC
TGCCATTCTCATCTTGATTATTACGCTGAGTTGGATGCAGTTGAACTCACAGGCACGCTT
GAGTTCAGCGGCTCATCTGCCGTTGATCCCCCTAGTGGCTCGTTAAGTAACATGAGGATC
ACTCAACCATCAACATCCACGATGACTCCATCCTTTAGCTCCGAGGATCTTATTTTCTCC
GAATCAAAGATTGATTATTCACTTTCCTCCAATGTTGATCCTGAACCTCCATCAGAAAGT
GATGCTTCATGTTCAGAAGAGGAAGAGCCAATCCAATTCTCTCATCCTGGAGGAATGTTT
AGTCTCCTCCCTGCTGAGCTGACGAGCAAGATCTTTAGCTACCTCCCGTTTCCGGACATT
TGTCGAGCTGCTCAAGTCTGCTCCGTCTTCCACGACCATAGCTACGACCCCTCACAACTC
ACCTGCCTTAATCTTCACACCTACTGGCACATGGTTAATGAGAACACACTCAAAGGCATC
GTGAACCGTTGTCAAAATGGCTGCACGGTTCAGACCCTCAACATGCGTTGGGTTGGTGGT
GGAGATATCATTTCTCCCGACCATTTTAACTGGTTCTTTAGGTCATGTAACTTGTCCTCT
CTCTCCTACCTAGATGTTGGCTCTTCTCCGTGCATCACTGACGAGGTTCTTACTACAATG
ACAGCAGTGTTGCCAGGTTTAAATCACCTTAATATTGAATCTTGTGATAAACCAAGCTCC
GAAGGTCTTCGAGTGTTACACAAATTAAAACAACTGGAAACACTGAATTTATACAGAACA
AAGGTTGATGATGCGGGCATCATATGTGTTCTACACTCCAACAATAATCTTCAAAGCTTA
AACCTGGGCAGCTGTCAACAGATAACGGATTATGATAGGGTGTTCTGTGAGATAGCTGCC
CATTGTAAACAGATGCGAATAATCGATGCATGGCGAGCTCGTAGTTTAACAAGTCGCGGT
TTGAATGAGTTGGCGAAAAATTGTCAATTCTTGGAAGAACTTGACTTTGGATGGTGTGGA
ACTCTTCAGAGCTCCACTGGTTGTTTCACATACCTTGCAAGATGTTGCCCTAATCTTAAG
AAGTTGTTTCTTACTGCGAATCGTACTGTGGCTGATGCAGAGATAAGAATGTTAGCTGAG
TATTGCATCAAATTAAGACAACTTGATATTTTGGGTACGCGACAAGTGTCAGTTGCCGCT
GTAGAGTTGCTCCTCCACCAGTGCAAAGATCTTCAATTTCTTGATCTTTCCTTCTGTTTT
TCTTTCACTGTGGACGTCGTGAACCGTCTGCGAACGATGTTTCCTGGCGTGGCGATCAAA
CGCAGTTTTCAGGAGTGATATTTTACACCCCTATATTATTTTTACCTTTTTTTAGACAAA
CTAGTGAAATGTAGGAAAAGATACGGCCGTGTTGCGTTTAACTTCTGCCTTATTTGTGTT
TGTAAAGACAACTTGTTGTCGGTGTTTGTTGTCTTTCTGTTTTCATGGTGAGTTTTTTTT
TGTGAGATTTTATCTTGGTTTTGCACACGCCGCCAGTTTCAGTATTTTTCTGCAAGAAAA
TATATTTTAGTTTAAAATAAATACCCTATACCTCG
| ProSiteProfiles |
F-box_dom (IPR001810) - T[308-363] 8.994 |
| SUPERFAMILY |
F-box-like_dom_sf (IPR036047) - T[311-348] 6.21E-7 |
| Pfam |
F-box_dom (IPR001810) - T[312-350] 8.5E-9 |
| Gene3D |
LRR_dom_sf (IPR032675) - T[373-481] 1.3E-10 - T[502-652] 5.4E-21 |
| SMART |
Leu-rich_rpt_Cys-con_subtyp (IPR006553) - T[409-437] 120.0 - T[460-484] 56.0 - T[485-512] 32.0 - T[513-538] 14.0 - T[539-559] 310.0 - T[567-592] 260.0 - T[593-618] 280.0 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FXL20_HUMAN | 26.515 % | 107 | 1.27E-24 |
| FBXL4_HUMAN | 39.494 % | 419 | 3.93E-139 |
| FBXL2_HUMAN | 25.823 % | 97.4 | 1.38E-21 |
