- Transcript 'KH2012:KH.C9.53.v9.B...' >
- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'Phfumi.CG.MTP2014.S7...' >
- Transcript 'KH2012:KH.C9.53.v5.R...' >
- Transcript 'KH2012:KH.C1.188.v2....'
Transcript Model
Transcript Id
KH2012:KH.C1.188.v2.A.SL1-1
Possible name(s)
TFF1
Gene model
Location
KhC1 [9,306,589 / 9,313,249]
Amino acid sequence
Length: 613
>KH.C1.188.v2.A.SL1-1
TPQITPGPEDEGTVLPLVAMKEERGCKGGDIYSEYPVHENDTCRCNEQGDAMFWVSLFDR
FSRQINSSSVVQTYNTTTHQLVDRIVPDQMPIIMMMILDDMQCNGTLKVNPGSCTCNRVT
EGHQATLLQYAVTSEEVQASLTPEQRRAVRQAFGAPVPRQSTTLNDYFLASMAGTTSPQL
LSILVNRGESQSVMLRQLIMSSFGLDSSMVHLLLNGGFGNDANKVAMINYLASIGAVDPT
ILPLLLQVNQGRDFYISSLIQAGRINPLMGMIILAQQGGASQSQLLNYITQAVAGSSNPA
YFESLTRPYIPALPSGIFPGSKLYFAHFESLGVNTCALHDLRNRIQCGYLGITAAACETA
PYCCYNPIFLTDVEVRNATNNAILSATAVPWCYYNVFFVYHNSYYLEVKKPTKFASPIQC
LGLFKYGLTLDNTFYHLYDPANPDNGVGRLVNPRYECGFPGVTQFHCVAIRGCCWDENSP
YRVPQCYQPNGPSNLEFNFDQIPVAYKPANGSCNVNIHKIPMLYYSRVACHYTINYHIIG
YNILSIPNRVDCLTKLGCCYEDDETVVAQYPSIPRCYSREIGTIAGLPAIGSLIRSGSTS
PFGPEFPPVGGKK
Nucleotide sequence
Length: 2,683
>KH2012:KH.C1.188.v2.A.SL1-1
ATTCAGCCAGTTGATAGATAAGTTAGCGAGCTGGTAGCATACAAAAAAATGAAGGTTTGC
TGTGTTCTCCTTGCCGTTTTGGTAACAGCGTATATTGCTGATGCCAATGTCCCACCATCA
TACGATGTAGACAACCAAGTTATTCTTGTCTTTTCATTAATCAGCGCCCAAAGGTCGGGA
GTGAGCCCGAACTCTGTGCTTGAAATGATCTTCCCAACTTTAATGGACAATAGCATCGAC
CTTTCAAGAGAAATGCAACTCGCTCTTCTCGTCTCTGCTGGGTTTACCCGAGAGCTCGCC
CACGCAACTTTAAACGAAGTTATCCCCATGATGGCACGAGATGGCAAAAGCAATGAAGAA
CAAGTGATGACTTTGCTTCTTCTTACCCGACAATTCTGCCGAAAAAATAAGGGCAGCAGC
ACTACTTGTAAGTATATTACAGTCAACATGTTGCAGCCTCTGGTTTCTTATTTGAACGCC
ACAAATTACACCAGGCCCAGAGGATGAAGGCACAGTTCTCCCATTGGTAGCAATGAAGGA
GGAACGTGGCTGCAAGGGCGGAGATATCTACAGCGAGTACCCAGTCCATGAGAACGATAC
GTGCAGATGCAACGAACAAGGAGATGCCATGTTCTGGGTTTCACTCTTCGACCGATTCTC
GAGACAAATTAACTCCTCCTCTGTCGTCCAAACCTACAATACTACCACACACCAGCTTGT
TGATCGCATCGTACCCGACCAAATGCCAATCATTATGATGATGATTTTGGATGACATGCA
GTGCAATGGTACTTTGAAAGTCAACCCAGGAAGCTGTACATGCAACAGAGTTACCGAGGG
ACATCAGGCAACACTTCTCCAATATGCTGTTACATCCGAAGAAGTACAGGCCAGTCTTAC
ACCCGAACAACGCCGAGCAGTTCGACAAGCATTCGGTGCACCAGTGCCACGTCAGTCCAC
CACCCTCAACGATTACTTTTTGGCCAGCATGGCAGGAACCACAAGCCCACAGTTGCTCTC
TATCTTGGTAAACAGAGGCGAATCCCAATCCGTTATGCTTCGTCAACTCATTATGTCCAG
TTTCGGTCTTGACTCTAGCATGGTACATCTTCTATTAAACGGTGGATTTGGTAACGACGC
TAACAAAGTAGCAATGATCAACTACCTTGCCAGCATCGGTGCAGTCGACCCAACTATTCT
TCCATTGCTCTTGCAAGTAAACCAAGGACGGGATTTCTACATCAGCAGTCTCATTCAAGC
TGGCCGAATCAATCCTTTGATGGGCATGATCATTCTCGCACAACAAGGAGGCGCTTCCCA
GTCTCAACTCCTCAATTACATTACCCAAGCAGTTGCTGGCTCGTCAAACCCAGCTTACTT
TGAGAGTTTGACCCGTCCTTACATCCCCGCATTGCCTTCCGGTATTTTCCCTGGTTCTAA
GCTTTACTTTGCTCATTTCGAGAGCCTCGGTGTCAACACATGCGCTCTGCACGATCTCAG
AAACCGAATCCAATGCGGATACCTTGGTATCACTGCCGCTGCTTGTGAAACTGCACCATA
CTGTTGTTACAACCCCATTTTCCTTACTGACGTTGAAGTACGAAATGCAACCAACAATGC
TATTCTTTCCGCCACAGCAGTGCCATGGTGTTACTACAACGTTTTCTTTGTTTACCACAA
CAGCTACTACTTGGAGGTTAAGAAACCAACAAAATTCGCATCACCAATTCAATGTCTTGG
ACTATTCAAATACGGTTTAACCCTTGATAACACTTTCTACCACCTTTATGACCCAGCAAA
CCCAGACAATGGTGTTGGAAGACTTGTTAATCCTCGATATGAATGCGGTTTCCCCGGTGT
GACTCAATTCCACTGCGTTGCTATTAGAGGATGTTGTTGGGATGAGAACTCACCATACAG
AGTCCCACAATGCTACCAACCAAATGGACCATCAAACCTTGAATTCAACTTTGATCAAAT
CCCAGTTGCTTACAAACCAGCAAATGGATCCTGCAACGTAAACATTCACAAAATCCCAAT
GCTCTACTACTCAAGAGTGGCTTGCCACTACACCATAAATTACCACATTATTGGTTACAA
CATATTATCTATCCCCAATAGAGTGGATTGCCTTACTAAACTAGGATGTTGTTATGAAGA
TGACGAGACTGTCGTTGCTCAATACCCATCTATTCCACGATGCTATTCAAGAGAAATCGG
AACAATAGCCGGTTTGCCAGCAATAGGAAGTTTAATTCGTTCTGGCAGCACATCACCATT
TGGACCTGAATTCCCACCAGTTGGAGGCAAAAAGTGAATCTGAACTATATACTTGCCTAT
TTCTTGTATAATGTAACTTGTCGTATGTTGGGCGACTTCTTTCCTTTTCATTTTTATATG
TTAATGTCACAAGACAACTGAATGGCTGCACAATAAGAAAAATACTAGAAAAATTGTACA
GTTAATATTACTATTCAAAGCTTTGATTATTTATTCTGAGCAAAATGATAACCTGCTGTA
AACTAGCCCTCAGTCAAGTTATTGTACTGCCGTTACTGCCATGCCAATGTAGTATGCAGA
TTAATGTTAACTTTTTAACAAATATTACGAGCTTTACTAAATTTTGGTGATACACGCCCA
CTAACGCTGTACTGTTATGTAATAAAAAATATCACGAAAGGTT
| SMART |
P_trefoil_dom (IPR000519) - T[334-399] 3.8E-11 - T[445-493] 3.0E-12 |
| ProSiteProfiles |
P_trefoil_dom (IPR000519) - T[334-396] 10.318 - T[445-490] 10.438 |
| CDD |
P_trefoil_dom (IPR000519) - T[334-395] 1.74473E-7 - T[450-490] 2.52022E-11 |
| Pfam |
P_trefoil_dom (IPR000519) - T[336-395] 5.7E-11 - T[453-489] 3.7E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|