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TRANSCRIPT CARD

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  1. Clone 'cieg025n05' > 
  2. Transcript 'KH2012:KH.C1.165.v5....'

Transcript Model

Transcript Id

KH2012:KH.C1.165.v5.A.SL2-1

Possible name(s)

VAMP1; VAMP2; VAMP3

Gene model

KH2012:KH.C1.165

Location

KhC1 [126,601 / 137,334]

Sequences

Amino acid sequence

Length: 178

>KH.C1.165.v5.A.SL2-1
HNCIKMSYGGTSNYGGPAAPTGGSSQASKKLQQTQAQVDDVVDIMRTNVDKVLERDQKLS
ELDDRADALQQGASQFETQAAKLKRKYWWKNCKMIIMLSVVILVIVAVIINVGDPHHRYT
CYYHYYSCLLLHEIIPSIRCHPNTEENLSINMDTILMTVAGSLPRIIQLSPATLLSLT

Nucleotide sequence

Length: 1,395

>KH2012:KH.C1.165.v5.A.SL2-1
AAGTAACTGTTCAGTAGAAAGTTCCAGTATTTCAATAATTGTAAAGATCAGCTTGATAAC
TAAGTTGGGTTTTTGATACTGATTGTTTTGTGTCATATATATCTGGATTGGAGTACATCT
CATAGTACCAACTGAATAACATAACTGCATAAAAATGTCTTACGGAGGTACATCTAACTA
TGGAGGTCCAGCTGCACCAACTGGAGGTTCATCCCAAGCTTCCAAGAAACTCCAGCAAAC
ACAAGCACAAGTGGATGATGTTGTGGACATCATGAGGACAAATGTGGACAAAGTGCTCGA
GAGGGATCAGAAGTTATCTGAGCTAGATGACAGGGCAGATGCATTACAGCAAGGCGCGTC
CCAGTTTGAGACTCAAGCTGCAAAACTGAAGAGAAAGTACTGGTGGAAGAATTGCAAGAT
GATAATCATGCTATCAGTAGTTATACTGGTCATAGTTGCAGTTATTATTAATGTGGGCGA
TCCTCATCATCGTTATACTTGTTATTATCATTATTATAGTTGTTTACTTCTCCACGAAAT
AATCCCCAGTATCCGTTGTCACCCAAACACAGAAGAAAACTTAAGCATAAACATGGACAC
AATACTGATGACTGTTGCTGGCTCACTACCGAGAATCATTCAACTATCACCAGCAACATT
ATTATCTTTAACCTAAGTGTATTTTCCACTCAACATTCAATTGTAAAGTACAAGTGTATG
GTTTAGTTAGTGTCGTTTCCTTGTGCTTGCAGTGTATGCCCAAGATTGTATCTTTCATAC
TTTTACCCAAAAGTATCTATATAAACATGTTAATATTATTGTACTGACCATTCGTGCAAT
TTCGTTACGTTGCTAGGTATCTATGCTTACATTTGCACACAATTTCAACCAAGTCGAAAA
GCTTTAAAATCACTTAATGCAAATTCTATTTATAGATGAGAAAAAATCAATATTTTCCAT
TCGAGAGCACATACGCTTTGTGCTTTTATCAAGCAGGTAGAATAATCGTTGTGTTCAGTA
TAATTGTTACTCTGATAACATATGTAGTTAAAAACTTCTGTTTAAGTCAAGCTCCGCATA
GCGTAACAGTATTACTCGCAAAACATGTAGTGAACACTCATTGTAGTTATTATGCAGACG
ATTTTGTCGCTGGAGGTTCCATACCGGTTTCAAGCTGTTATTTCGAATCGGTAGTAACTT
CTTACTGACGTTAATTAGTTACGGTACACGGCAAGGCATGTTATTTTGCTTGTACATATG
AAGTTTACTTTGAGCAATCGTACTAAAACTAAACCTACAATTGTCTTGCAAATGTAGTTG
TGTGGCTAAATGTTCAGACTGTAATCTGTTACTTGAGTATTTTCGCTTCACTTACACTTA
CGTCAAATTACCAAA

InterProScan

Pfam
Synaptobrevin (IPR001388) - T[28-111] 1.1E-32
ProSiteProfiles
Synaptobrevin (IPR001388) - T[30-90] 18.683
PRINTS
Synaptobrevin (IPR001388) - T[35-54] 4.2E-30 - T[55-74] 4.2E-30 - T[91-110] 4.2E-30
ProSitePatterns
Synaptobrevin (IPR001388) - T[48-67] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
VAMP3_HUMAN 81.013 % 132 8.16E-41
VAMP2_HUMAN 83.784 % 132 1.41E-40
VAMP1_HUMAN 80 % 132 2.79E-40