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  1. Transcript 'KH2012:KH.C5.392.v2....'
  2. Transcript 'KH2012:KH.C11.112.v3...'
  3. Transcript 'KH2012:KH.C14.5.v2.A...'
  4. Transcript 'Phfumi.CG.MTP2014.S3...'
  5. Transcript 'KH2012:KH.C1.165.v4....'

Transcript Model

Transcript Id

KH2012:KH.C1.165.v4.A.SL1-1

Possible name(s)

VAMP1; VAMP2; VAMP3

Location

KhC1 [126,615 / 137,334]

Sequences

Amino acid sequence

Length: 134

>KH.C1.165.v4.A.SL1-1
HNCIKIIEMSGYDAVPNPRSYGGTSNYGGPAAPTGGSSQASKKLQQTQAQVDDVVDIMRT
NVDKVLERDQKLSELDDRADALQQGASQFETQAAKLKRKYWWKNCKMIIMLSVVILVIVA
VIIISVVTQTQKKT

Nucleotide sequence

Length: 1,341

>KH2012:KH.C1.165.v4.A.SL1-1
TAGAAAGTTCCAGTATTTCAATAATTGTAAAGATCAGCTTGATAACTAAGTTGGGTTTTT
GATACTGATTGTTTTGTGTCATATATATCTGGATTGGAGTACATCTCATAGTACCAACTG
AATAACATAACTGCATAAAAATAATTGAAATGTCTGGATACGACGCGGTCCCAAACCCAA
GGTCTTACGGAGGTACATCTAACTATGGAGGTCCAGCTGCACCAACTGGAGGTTCATCCC
AAGCTTCCAAGAAACTCCAGCAAACACAAGCACAAGTGGATGATGTTGTGGACATCATGA
GGACAAATGTGGACAAAGTGCTCGAGAGGGATCAGAAGTTATCTGAGCTAGATGACAGGG
CAGATGCATTACAGCAAGGCGCGTCCCAGTTTGAGACTCAAGCTGCAAAACTGAAGAGAA
AGTACTGGTGGAAGAATTGCAAGATGATAATCATGCTATCAGTAGTTATACTGGTCATAG
TTGCAGTTATTATTATATCCGTTGTCACCCAAACACAGAAGAAAACTTAAGCATAAACAT
GGACACAATACTGATGACTGTTGCTGGCTCACTACCGAGAATCATTCAACTATCACCAGC
AACATTATTATCTTTAACCTAAGTGTATTTTCCACTCAACATTCAATTGTAAAGTACAAG
TGTATGGTTTAGTTAGTGTCGTTTCCTTGTGCTTGCAGTGTATGCCCAAGATTGTATCTT
TCATACTTTTACCCAAAAGTATCTATATAAACATGTTAATATTATTGTACTGACCATTCG
TGCAATTTCGTTACGTTGCTAGGTATCTATGCTTACATTTGCACACAATTTCAACCAAGT
CGAAAAGCTTTAAAATCACTTAATGCAAATTCTATTTATAGATGAGAAAAAATCAATATT
TTCCATTCGAGAGCACATACGCTTTGTGCTTTTATCAAGCAGGTAGAATAATCGTTGTGT
TCAGTATAATTGTTACTCTGATAACATATGTAGTTAAAAACTTCTGTTTAAGTCAAGCTC
CGCATAGCGTAACAGTATTACTCGCAAAACATGTAGTGAACACTCATTGTAGTTATTATG
CAGACGATTTTGTCGCTGGAGGTTCCATACCGGTTTCAAGCTGTTATTTCGAATCGGTAG
TAACTTCTTACTGACGTTAATTAGTTACGGTACACGGCAAGGCATGTTATTTTGCTTGTA
CATATGAAGTTTACTTTGAGCAATCGTACTAAAACTAAACCTACAATTGTCTTGCAAATG
TAGTTGTGTGGCTAAATGTTCAGACTGTAATCTGTTACTTGAGTATTTTCGCTTCACTTA
CACTTACGTCAAATTACCAAA

InterProScan

PIRSF
Synaptobrevin/VAMP (IPR016444) - T[20-133] 1.5E-41
Pfam
Synaptobrevin (IPR001388) - T[41-127] 8.4E-34
ProSiteProfiles
Synaptobrevin (IPR001388) - T[43-103] 18.683
PRINTS
Synaptobrevin (IPR001388) - T[48-67] 2.3E-30 - T[68-87] 2.3E-30 - T[104-123] 2.3E-30
ProSitePatterns
Synaptobrevin (IPR001388) - T[61-80] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
VAMP3_HUMAN 81.013 % 132 4.39E-41
VAMP2_HUMAN 83.784 % 131 1.32E-40
VAMP1_HUMAN 80 % 131 1.09E-40