- Transcript 'KH2012:KH.C5.392.v2....' >
- Transcript 'KH2012:KH.C11.112.v3...' >
- Transcript 'KH2012:KH.C14.5.v2.A...' >
- Transcript 'Phfumi.CG.MTP2014.S3...' >
- Transcript 'KH2012:KH.C1.165.v4....'
Transcript Model
Transcript Id
KH2012:KH.C1.165.v4.A.SL1-1
Possible name(s)
VAMP1; VAMP2; VAMP3
Gene model
Location
KhC1 [126,615 / 137,334]
Amino acid sequence
Length: 134
>KH.C1.165.v4.A.SL1-1
HNCIKIIEMSGYDAVPNPRSYGGTSNYGGPAAPTGGSSQASKKLQQTQAQVDDVVDIMRT
NVDKVLERDQKLSELDDRADALQQGASQFETQAAKLKRKYWWKNCKMIIMLSVVILVIVA
VIIISVVTQTQKKT
Nucleotide sequence
Length: 1,341
>KH2012:KH.C1.165.v4.A.SL1-1
TAGAAAGTTCCAGTATTTCAATAATTGTAAAGATCAGCTTGATAACTAAGTTGGGTTTTT
GATACTGATTGTTTTGTGTCATATATATCTGGATTGGAGTACATCTCATAGTACCAACTG
AATAACATAACTGCATAAAAATAATTGAAATGTCTGGATACGACGCGGTCCCAAACCCAA
GGTCTTACGGAGGTACATCTAACTATGGAGGTCCAGCTGCACCAACTGGAGGTTCATCCC
AAGCTTCCAAGAAACTCCAGCAAACACAAGCACAAGTGGATGATGTTGTGGACATCATGA
GGACAAATGTGGACAAAGTGCTCGAGAGGGATCAGAAGTTATCTGAGCTAGATGACAGGG
CAGATGCATTACAGCAAGGCGCGTCCCAGTTTGAGACTCAAGCTGCAAAACTGAAGAGAA
AGTACTGGTGGAAGAATTGCAAGATGATAATCATGCTATCAGTAGTTATACTGGTCATAG
TTGCAGTTATTATTATATCCGTTGTCACCCAAACACAGAAGAAAACTTAAGCATAAACAT
GGACACAATACTGATGACTGTTGCTGGCTCACTACCGAGAATCATTCAACTATCACCAGC
AACATTATTATCTTTAACCTAAGTGTATTTTCCACTCAACATTCAATTGTAAAGTACAAG
TGTATGGTTTAGTTAGTGTCGTTTCCTTGTGCTTGCAGTGTATGCCCAAGATTGTATCTT
TCATACTTTTACCCAAAAGTATCTATATAAACATGTTAATATTATTGTACTGACCATTCG
TGCAATTTCGTTACGTTGCTAGGTATCTATGCTTACATTTGCACACAATTTCAACCAAGT
CGAAAAGCTTTAAAATCACTTAATGCAAATTCTATTTATAGATGAGAAAAAATCAATATT
TTCCATTCGAGAGCACATACGCTTTGTGCTTTTATCAAGCAGGTAGAATAATCGTTGTGT
TCAGTATAATTGTTACTCTGATAACATATGTAGTTAAAAACTTCTGTTTAAGTCAAGCTC
CGCATAGCGTAACAGTATTACTCGCAAAACATGTAGTGAACACTCATTGTAGTTATTATG
CAGACGATTTTGTCGCTGGAGGTTCCATACCGGTTTCAAGCTGTTATTTCGAATCGGTAG
TAACTTCTTACTGACGTTAATTAGTTACGGTACACGGCAAGGCATGTTATTTTGCTTGTA
CATATGAAGTTTACTTTGAGCAATCGTACTAAAACTAAACCTACAATTGTCTTGCAAATG
TAGTTGTGTGGCTAAATGTTCAGACTGTAATCTGTTACTTGAGTATTTTCGCTTCACTTA
CACTTACGTCAAATTACCAAA
| PIRSF |
Synaptobrevin/VAMP (IPR016444) - T[20-133] 1.5E-41 |
| Pfam |
Synaptobrevin (IPR001388) - T[41-127] 8.4E-34 |
| ProSiteProfiles |
Synaptobrevin (IPR001388) - T[43-103] 18.683 |
| PRINTS |
Synaptobrevin (IPR001388) - T[48-67] 2.3E-30 - T[68-87] 2.3E-30 - T[104-123] 2.3E-30 |
| ProSitePatterns |
Synaptobrevin (IPR001388) - T[61-80] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| VAMP3_HUMAN | 81.013 % | 132 | 4.39E-41 |
| VAMP2_HUMAN | 83.784 % | 131 | 1.32E-40 |
| VAMP1_HUMAN | 80 % | 131 | 1.09E-40 |