- Transcript 'KH2012:KH.C1.165.v2....'
Transcript Model
Transcript Id
KH2012:KH.C1.165.v2.A.SL1-1
Possible name(s)
VAMP1; VAMP2; VAMP3
Gene model
Location
KhC1 [126,615 / 137,334]
Amino acid sequence
Length: 116
>KH.C1.165.v2.A.SL1-1
HNCIKMSYGGTSNYGGPAAPTGGSSQASKKLQQTQAQVDDVVDIMRTNVDKVLERDQKLS
ELDDRADALQQGASQFETQAAKLKRKYWWKNCKMIIMLSVVILVIVAVIIIYFSTK
Nucleotide sequence
Length: 1,329
>KH2012:KH.C1.165.v2.A.SL1-1
TAGAAAGTTCCAGTATTTCAATAATTGTAAAGATCAGCTTGATAACTAAGTTGGGTTTTT
GATACTGATTGTTTTGTGTCATATATATCTGGATTGGAGTACATCTCATAGTACCAACTG
AATAACATAACTGCATAAAAATGTCTTACGGAGGTACATCTAACTATGGAGGTCCAGCTG
CACCAACTGGAGGTTCATCCCAAGCTTCCAAGAAACTCCAGCAAACACAAGCACAAGTGG
ATGATGTTGTGGACATCATGAGGACAAATGTGGACAAAGTGCTCGAGAGGGATCAGAAGT
TATCTGAGCTAGATGACAGGGCAGATGCATTACAGCAAGGCGCGTCCCAGTTTGAGACTC
AAGCTGCAAAACTGAAGAGAAAGTACTGGTGGAAGAATTGCAAGATGATAATCATGCTAT
CAGTAGTTATACTGGTCATAGTTGCAGTTATTATTATTTACTTCTCCACGAAATAATCCC
CAGTATCCGTTGTCACCCAAACACAGAAGAAAACTTAAGCATAAACATGGACACAATACT
GATGACTGTTGCTGGCTCACTACCGAGAATCATTCAACTATCACCAGCAACATTATTATC
TTTAACCTAAGTGTATTTTCCACTCAACATTCAATTGTAAAGTACAAGTGTATGGTTTAG
TTAGTGTCGTTTCCTTGTGCTTGCAGTGTATGCCCAAGATTGTATCTTTCATACTTTTAC
CCAAAAGTATCTATATAAACATGTTAATATTATTGTACTGACCATTCGTGCAATTTCGTT
ACGTTGCTAGGTATCTATGCTTACATTTGCACACAATTTCAACCAAGTCGAAAAGCTTTA
AAATCACTTAATGCAAATTCTATTTATAGATGAGAAAAAATCAATATTTTCCATTCGAGA
GCACATACGCTTTGTGCTTTTATCAAGCAGGTAGAATAATCGTTGTGTTCAGTATAATTG
TTACTCTGATAACATATGTAGTTAAAAACTTCTGTTTAAGTCAAGCTCCGCATAGCGTAA
CAGTATTACTCGCAAAACATGTAGTGAACACTCATTGTAGTTATTATGCAGACGATTTTG
TCGCTGGAGGTTCCATACCGGTTTCAAGCTGTTATTTCGAATCGGTAGTAACTTCTTACT
GACGTTAATTAGTTACGGTACACGGCAAGGCATGTTATTTTGCTTGTACATATGAAGTTT
ACTTTGAGCAATCGTACTAAAACTAAACCTACAATTGTCTTGCAAATGTAGTTGTGTGGC
TAAATGTTCAGACTGTAATCTGTTACTTGAGTATTTTCGCTTCACTTACACTTACGTCAA
ATTACCAAA
| PIRSF |
Synaptobrevin/VAMP (IPR016444) - T[9-116] 1.0E-40 |
| Pfam |
Synaptobrevin (IPR001388) - T[28-113] 4.3E-34 |
| ProSiteProfiles |
Synaptobrevin (IPR001388) - T[30-90] 18.683 |
| PRINTS |
Synaptobrevin (IPR001388) - T[35-54] 1.8E-30 - T[55-74] 1.8E-30 - T[91-110] 1.8E-30 |
| ProSitePatterns |
Synaptobrevin (IPR001388) - T[48-67] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| VAMP3_HUMAN | 81.013 % | 131 | 3.04E-41 |
| VAMP2_HUMAN | 77.528 % | 137 | 3.68E-43 |
| VAMP1_HUMAN | 76.404 % | 134 | 3.16E-42 |