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- Transcript 'KH2012:KH.C11.451.v1...'
Transcript Model
Transcript Id
KH2012:KH.C11.451.v1.B.ND1-1
Possible name(s)
PTPRD; PTPRF; PTPRQ
Gene model
Location
KhC11 [2,828,936 / 2,839,539]
Amino acid sequence
Length: 1,032
>KH.C11.451.v1.B.ND1-1
MEQIAPKTIQVFKLYKLLFNLILSLRFPQVFFNLILSLRLPLFQTYIFVAVPTTAVTSLQ
VVPSARSAAVTFDAPVPVTGVFVYTVQYYVTSAGVGTAQSVTLNTNSGTVPALTPNSAYT
FVVTPRTGATGAGPTATATNTTLEDTPGMVSSLVVSSSRFDQIDVTWGAPTMPNGVITQY
HITPLTSNLDYTVTVYAYTAIGRGVSNSAVQRTLESVPIDPVTSVVIATAATSVNVSFNQ
PATVTGMLSYEVKYYVTSAGPSTAVEQNFTSTADTITGLMPNTAYTVIVTPQTTAGKGGA
ATVVTQTFMTDEAAAAAVASVTEGTKTADSITVNWAPPAVNNGVITQYRVTWNSGAGNQV
VTSGTSHTITGLSAFTDYTVTVYASTAVGEGPGVNQVIRTNEAVPTDPVTSVNVVPQATS
VGVSFNQPATVTGMLSYEVRYYVTSAGTSTAVDQNFTSTTDTITGLMPNTAYTVTPQTSA
GKGGAATATTQTFTTLEDVAAAVASVTEGTKTADSITVNWAPPAVNNGVITQYRVTWSPG
AGSQVVTGATSYTITGLSAFTDYTVTVYASTAVGEGPGVNQVIQTNEAVPAQIGAFVAVG
RTNTIRVTITPPVPANGVLLRYEATLNQDQAECTRFGDTSCTQNRVQSVTANGNTPGVIV
FGNLTSFRSYEITVRASTSAGFGPVSVILTSRTTTPQGVPTNVQITSLSDTSAIVTWDSA
KPVPGNSTYIVTLTAVSNSSDVRTITIIPSTVSLNNSVVFTNLQAGHGYSGSVVQSTSVG
MSDPSTSATLYRAPTLIAGAAPPTAGPTTNALGVSPTVAFQVENPCLRKAQLFSEIGGTI
NQIQLIVWQIQAPTPTTNANVWANVINQNPIVAYQAGTITCTGTASGRKKRALTANNDGY
VVGADSTCTTTTVAVCNGPLPSGRQFNVSYIGVNGGGQTSGMTAPGGPFSTSTPTGLEAG
EIAAIVISCIVVLLLIISLIYYCVKRRRASGMHTVSGRDNRSFDDTQKQRYQVEASETPS
TTYSTTQKKGEI
Nucleotide sequence
Length: 3,612
>KH2012:KH.C11.451.v1.B.ND1-1
ATGGAACAAATTGCTCCCAAAACTATACAAGTTTTTAAACTTTATAAATTACTTTTTAAC
CTAATACTTTCCCTACGGTTCCCACAAGTTTTTTTTAACCTAATACTTTCCCTACGGCTC
CCACTATTTCAAACCTATATTTTTGTTGCAGTTCCGACTACTGCTGTCACAAGCTTACAG
GTAGTTCCTTCAGCAAGAAGCGCTGCTGTTACCTTTGACGCCCCTGTTCCCGTTACTGGC
GTGTTTGTATACACGGTGCAATACTACGTAACATCTGCCGGTGTGGGTACAGCACAATCA
GTCACCTTGAATACAAACTCTGGTACAGTTCCAGCGCTCACACCAAACAGCGCATACACT
TTCGTGGTAACACCAAGAACTGGGGCCACAGGTGCGGGGCCCACTGCCACTGCTACAAAT
ACAACTTTAGAAGATACCCCTGGTATGGTGTCTAGCCTGGTGGTCTCTTCAAGTCGTTTC
GATCAAATTGATGTAACATGGGGTGCACCTACTATGCCCAATGGCGTAATCACACAGTAT
CACATTACCCCTCTCACTTCCAATCTTGACTACACGGTCACCGTGTATGCCTATACTGCT
ATTGGTAGAGGTGTAAGCAATTCTGCTGTGCAAAGAACCTTGGAATCAGTTCCAATTGAT
CCGGTTACAAGTGTTGTGATAGCAACTGCTGCTACGTCAGTAAATGTGAGTTTCAACCAA
CCAGCCACAGTCACTGGCATGCTCTCATATGAAGTTAAGTATTACGTGACTTCTGCTGGA
CCAAGCACTGCTGTTGAACAAAACTTTACATCTACAGCTGATACAATTACTGGACTCATG
CCCAACACAGCTTACACTGTTATAGTTACTCCACAGACCACAGCAGGCAAGGGGGGTGCT
GCAACTGTAGTGACGCAAACTTTTATGACTGATGAAGCCGCAGCAGCAGCCGTGGCAAGC
GTCACAGAAGGCACAAAAACTGCCGACTCCATAACTGTCAACTGGGCACCGCCAGCTGTT
AATAATGGAGTCATTACTCAGTACAGAGTTACATGGAATTCAGGTGCTGGAAATCAAGTT
GTCACTAGTGGTACAAGCCACACCATTACAGGACTCTCTGCTTTTACTGACTACACTGTA
ACTGTATATGCGTCAACTGCTGTTGGTGAGGGGCCTGGTGTCAATCAAGTAATACGAACA
AATGAAGCCGTACCAACCGATCCAGTTACAAGTGTGAATGTTGTACCACAAGCAACTTCA
GTAGGTGTGAGTTTCAACCAACCAGCCACAGTCACTGGCATGCTCTCATATGAAGTTAGG
TATTATGTGACTTCTGCTGGAACAAGCACTGCTGTTGATCAAAACTTTACGTCTACAACG
GATACAATTACTGGACTCATGCCCAACACAGCATACACTGTTACTCCACAGACCTCAGCA
GGCAAGGGAGGTGCTGCAACTGCAACGACACAAACATTTACAACTCTTGAAGACGTGGCA
GCAGCCGTGGCAAGCGTCACAGAAGGCACAAAAACTGCCGACTCTATAACTGTCAACTGG
GCACCGCCAGCTGTTAATAATGGAGTCATTACTCAGTACAGAGTTACATGGAGTCCAGGT
GCTGGATCTCAAGTAGTCACTGGTGCTACAAGCTACACCATTACAGGACTCTCTGCTTTT
ACTGACTACACAGTAACTGTATATGCATCAACTGCTGTTGGTGAGGGGCCTGGTGTCAAT
CAAGTAATACAAACAAATGAAGCCGTTCCAGCTCAGATCGGTGCTTTTGTAGCAGTGGGA
AGGACTAATACTATTAGGGTGACCATCACACCACCAGTGCCTGCCAATGGTGTTTTATTG
CGATATGAAGCAACTCTTAACCAAGACCAAGCAGAATGCACAAGATTTGGGGACACCAGC
TGCACACAGAATAGAGTGCAATCAGTAACTGCTAATGGAAATACCCCAGGAGTTATTGTA
TTTGGAAACCTAACATCTTTCAGGTCTTATGAAATAACTGTGAGAGCGAGTACCTCTGCC
GGATTTGGTCCAGTGAGTGTAATACTAACTAGCAGAACAACAACCCCTCAAGGCGTGCCC
ACCAACGTTCAAATTACATCTCTCTCTGATACTTCAGCAATTGTAACATGGGACTCCGCT
AAACCTGTACCTGGCAACAGTACTTATATTGTCACTCTGACTGCTGTTAGCAATTCTAGT
GACGTTCGCACAATAACAATTATTCCGAGCACTGTGTCTCTGAACAACAGCGTTGTATTT
ACAAACTTACAAGCTGGCCATGGGTACTCAGGTAGTGTGGTACAATCTACCAGTGTTGGA
ATGAGTGACCCATCAACAAGTGCCACACTTTACAGAGCTCCTACATTAATTGCTGGAGCT
GCCCCCCCTACTGCTGGCCCCACAACAAACGCTCTTGGAGTTTCACCCACAGTTGCCTTC
CAAGTTGAAAACCCATGCCTCAGAAAAGCGCAGTTATTTTCAGAAATAGGCGGCACTATT
AATCAAATCCAACTTATTGTTTGGCAAATTCAAGCACCTACTCCAACAACTAACGCCAAC
GTTTGGGCAAATGTTATCAATCAGAATCCTATTGTTGCATACCAAGCTGGCACTATAACA
TGCACTGGAACAGCGAGTGGTAGAAAGAAGAGAGCTTTAACTGCTAACAATGATGGCTAT
GTTGTTGGTGCTGATTCCACATGTACAACAACAACTGTAGCCGTTTGTAATGGCCCGCTT
CCTAGTGGTCGTCAGTTCAATGTCAGCTACATAGGAGTTAATGGTGGTGGTCAAACCTCA
GGGATGACTGCACCAGGTGGTCCCTTTTCAACAAGCACCCCAACTGGATTGGAAGCTGGC
GAAATTGCTGCTATTGTCATTTCTTGCATTGTAGTTTTGTTGCTAATCATATCACTTATT
TACTACTGCGTGAAAAGGAGGCGTGCTTCTGGTATGCATACAGTGAGTGGTCGCGACAAT
CGCTCTTTCGACGACACGCAAAAACAACGTTACCAAGTTGAGGCATCAGAGACGCCTTCT
ACTACATACAGCACCACCCAGAAAAAGGGTGAAATATGAAAACTCATTGGATACTGAAAG
CATGAAATCAAATGACAACATTTATTTATTCATGCCAACTGTTTGCACTCACTTTTGTAT
TTAGTTTACCAATACCATTGTAAATTCACAAGTATTTACTTGCTGCCTAAATCGCATTGT
CGAAAATGCCTGTGACACCCGATGGCTTATACAAAAAACATAAATTCTGCCAAAATAGAT
ACAAAAATGAAGTTATGGCAGATTGTACTTTTACCTGTGTTGTATTTTCTCATTATATGC
ACTATATATGTAACTTAACTAACGATTTTGAGTTCCGTTATTATTAATCTTCTGTTGCCT
ATCTCTGCCCCGTGTGAAGTCCTATTATTGAATGATAATGCGATGCTATGACGATCTGCC
GTCTACGCCTGGGCATCTTAAACAATATCATGATCAATTATTTCTGCCATTAAAGACTTA
CAACTAATCGACATTAACTGTATCCGACGCATGTTTTATCATTCGTGTAAATAAACTAAA
GATTATTAGGAA
| ProSiteProfiles |
FN3_dom (IPR003961) - T[52-145] 12.521 - T[218-313] 13.854 - T[317-406] 16.71 - T[408-498] 11.417 - T[502-591] 17.168 - T[592-698] 9.342 - T[699-795] 17.562 |
| SMART |
FN3_dom (IPR003961) - T[53-133] 0.19 - T[147-204] 0.0011 - T[218-298] 1.9E-4 - T[315-391] 4.7E-10 - T[402-483] 0.52 - T[500-576] 4.2E-10 - T[590-683] 0.0013 - T[697-782] 0.053 |
| CDD |
FN3_dom (IPR003961) - T[55-142] 0.0031685 - T[218-307] 1.64241E-5 - T[327-392] 2.65157E-11 - T[407-483] 0.00591809 - T[512-577] 6.26542E-12 - T[597-693] 0.00719394 - T[698-789] 5.04068E-6 |
| Gene3D |
Ig-like_fold (IPR013783) - T[56-137] 3.4E-5 - T[138-183] 6.0E-5 - T[205-309] 1.7E-9 - T[322-406] 1.7E-17 - T[407-498] 3.0E-7 - T[507-591] 8.0E-18 - T[594-699] 5.1E-10 - T[700-795] 9.8E-10 |
| SUPERFAMILY |
FN3_sf (IPR036116) - T[62-218] 1.2E-19 - T[220-394] 4.79E-27 - T[397-500] 2.76E-9 - T[510-693] 8.78E-27 - T[687-791] 2.54E-11 |
| Pfam |
FN3_dom (IPR003961) - T[226-299] 1.7E-5 - T[326-392] 1.8E-11 - T[511-577] 1.6E-12 - T[700-785] 1.0E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PTPRQ_HUMAN | 26.068 % | 140 | 2.05E-33 |
| PTPRF_HUMAN | 26.154 % | 139 | 4.18E-33 |
| PTPRD_HUMAN | 25.581 % | 135 | 5.32E-32 |