- Transcript 'KH2012:KH.C11.439.v1...'
Transcript Model
Transcript Id
KH2012:KH.C11.439.v1.A.nonSL1-1
Possible name(s)
CLVS1; RLBP1; TTPAL
Gene model
Location
KhC11 [2,434,318 / 2,439,029]
Amino acid sequence
Length: 321
>KH.C11.439.v1.A.nonSL1-1
RLTQTTSAMAGTFRRISVSQEASFTPKDHGPICGNHPIPIHTVKKAERELNETPERRQAE
VAKLREIIETRFQEATEENKSEATGVRTRFASTGDAELIKFLRARKFDSEKAYQLMKGYV
KYSIKHPDVVSDVKAKDVRQWMEKGRPGVLPTRDSQGRVILFFRLDGWDPEDLPFTEVMQ
GFVYVLEKLLESEETQINGVCLVEDFSGYTLNHVSAVGINEYRQMIDMLQGSFPCRFKGI
HCIRQPWFFAKAFGIIQPFLKAKLFERIHVLGEDLEPFYNEFRKDILPEELGGSGSAYDG
KAVAEMVLGPKTEDEDEDTAL
Nucleotide sequence
Length: 1,192
>KH2012:KH.C11.439.v1.A.nonSL1-1
ACACATAAAGAAGAACGTTGGTTGGTTGTTGATATTAAAACTCCATATGTTCCCATTCAT
TTCCCTGCAACCATCTGAAGACTTACACAGACGACATCTGCAATGGCTGGAACTTTTCGC
CGTATTTCTGTCTCGCAAGAAGCCAGTTTTACCCCAAAGGATCATGGTCCAATCTGTGGC
AATCACCCTATCCCAATCCATACAGTTAAAAAGGCCGAACGGGAATTGAATGAGACTCCG
GAACGAAGACAGGCAGAAGTCGCAAAACTTAGGGAAATCATCGAAACAAGATTTCAAGAA
GCGACAGAAGAAAACAAAAGTGAGGCGACCGGGGTTCGAACCCGGTTCGCAAGCACCGGT
GATGCCGAACTTATCAAGTTTTTGCGAGCGAGAAAATTCGACTCCGAGAAAGCTTATCAA
CTCATGAAAGGTTACGTAAAGTACAGCATCAAGCACCCAGACGTAGTGAGTGACGTGAAA
GCGAAGGACGTTCGCCAATGGATGGAAAAAGGACGACCAGGCGTTTTACCTACCCGGGAC
TCCCAGGGCAGAGTAATTCTCTTCTTCCGTTTGGATGGCTGGGACCCTGAAGATCTTCCA
TTCACTGAAGTCATGCAAGGTTTCGTATACGTACTCGAGAAACTGCTGGAAAGTGAGGAA
ACTCAAATTAATGGGGTTTGTCTCGTTGAAGATTTTAGTGGCTACACACTCAACCATGTG
TCCGCTGTTGGAATTAATGAATATCGTCAAATGATCGATATGTTGCAGGGATCTTTTCCA
TGTCGTTTCAAAGGCATTCACTGCATTCGACAGCCGTGGTTTTTTGCCAAGGCTTTCGGT
ATCATTCAACCTTTTCTTAAAGCAAAACTCTTTGAAAGGATCCACGTACTCGGTGAGGAT
CTTGAACCGTTCTACAACGAATTCCGTAAAGATATCTTGCCAGAAGAACTTGGGGGTAGC
GGTTCTGCCTACGATGGAAAAGCTGTTGCAGAAATGGTGCTAGGACCGAAAACGGAGGAC
GAAGACGAGGATACGGCATTGTAATTGGAAAGATTTGATTAATAAACCTGGTTTCAAGCG
TTATTTCCACCCTACACGTTGTCTGTACACATCAGTATTCGTATTTGTCGTCTCGATATA
TAGGCCTACACACATTCCTGAAAATAAATGTTATCCTGTATGTACCACAAAA
| PANTHER |
RLBP1 (IPR032941) - T[32-317] 4.7E-128 |
| SUPERFAMILY |
CRAL/TRIO_N_dom_sf (IPR036273) - T[43-130] 2.09E-13 |
| Pfam |
CRAL/TRIO_N_dom (IPR011074) - T[90-117] 1.2E-5 |
| SMART |
CRAL/TRIO_N_dom (IPR011074) - T[94-119] 2.0E-6 |
| Gene3D |
CRAL-TRIO_dom_sf (IPR036865) - T[126-307] 1.1E-59 |
| SMART |
CRAL-TRIO_dom (IPR001251) - T[134-296] 7.3E-23 |
| SUPERFAMILY |
CRAL-TRIO_dom_sf (IPR036865) - T[137-299] 4.71E-45 |
| ProSiteProfiles |
CRAL-TRIO_dom (IPR001251) - T[138-299] 19.51 |
| Pfam |
CRAL-TRIO_dom (IPR001251) - T[142-294] 1.6E-34 |
| CDD |
CRAL-TRIO_dom (IPR001251) - T[148-293] 4.35749E-35 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TTPAL_HUMAN | 33.7 % | 167 | 3.71E-49 |
| RLBP1_HUMAN | 41.64 % | 280 | 1.97E-93 |
| CLVS1_HUMAN | 34.286 % | 174 | 4.71E-52 |
