- Clone 'cima864117' >
- Clone 'ciad066l16' >
- Transcript 'KH2012:KH.C11.386.v1...'
Transcript Model
Transcript Id
KH2012:KH.C11.386.v1.A.SL1-1
Possible name(s)
LDLRAD3; LRP11; ST14
Gene model
Location
KhC11 [2,450,937 / 2,459,142]
Amino acid sequence
Length: 478
>KH.C11.386.v1.A.SL1-1
SSEMLATPFNIWHVAGVVLVLAKSLEAGLLPDRGSNSNSSVGLFTPNQHGECKMLQTNLF
LLDLACVLKKKARATAHELTSPSLAACKRVCCEWSEGPCDLVYWNRYHKCVVMNYYVLSL
CPLMSPTLTYPGSYTFTLLLSITQRVSPALKQHLLLKGYSSRIAEFLGCGANSFVCNNWQ
CIEKGQVCDGIQHCVDNSDENQCPQIIVASQGDKCIDFKGNFVDNGAEYTPFGKADECQM
CICGNNSQPSYCYSPTCNSRMLTDCEGPNPDICCRCDKSGRNHPDEPTDSEENDMFVNLS
GTQRLIVSCMSVLVVVTLLLFFSRNLMHRARGAIIPSRHRRDRSHNTWMSQQSLPPTRAF
MGRYCSSSDRMSFVDPNDSEDMSEPPPSYSSLKPATRNERGSRSSSGESPPSYNASITLP
PASPEATSSSSANNRDDQVTQSTVSEHVIQSEPIRNEEPISPVSTTSCSPLLVEEHDQ
Nucleotide sequence
Length: 2,277
>KH2012:KH.C11.386.v1.A.SL1-1
ACTCTTCCGAAATGTTAGCAACACCTTTTAATATATGGCATGTGGCTGGAGTGGTTTTAG
TCTTGGCAAAATCCCTGGAAGCAGGACTGTTGCCAGATAGAGGAAGCAATTCGAATAGCT
CTGTCGGATTATTCACCCCAAATCAGCATGGCGAATGCAAGATGCTGCAGACCAATCTTT
TCCTGCTCGATCTGGCTTGTGTTTTGAAGAAAAAGGCCAGGGCAACCGCTCACGAGTTGA
CCTCCCCCTCACTGGCTGCTTGTAAAAGAGTCTGCTGTGAATGGTCAGAGGGGCCATGTG
ACTTGGTGTATTGGAATAGGTACCACAAGTGCGTTGTGATGAACTATTACGTGCTAAGCT
TGTGTCCGCTCATGTCACCAACTCTAACCTACCCAGGAAGCTACACTTTCACTTTACTGT
TGAGCATCACCCAGAGAGTTTCACCTGCACTTAAGCAGCATTTGCTGTTAAAAGGATACA
GTTCTCGAATTGCTGAATTCCTGGGATGTGGAGCTAATTCCTTTGTATGTAACAACTGGC
AATGTATTGAGAAGGGACAAGTATGTGATGGTATTCAGCATTGTGTTGATAATTCTGATG
AAAATCAATGTCCCCAAATTATTGTAGCTTCGCAAGGGGATAAATGCATCGACTTCAAGG
GAAACTTTGTTGATAATGGTGCTGAGTACACACCTTTCGGGAAAGCAGACGAATGCCAGA
TGTGTATTTGCGGCAACAACAGCCAACCCTCCTACTGTTATTCCCCCACATGCAACAGCA
GGATGTTGACGGATTGCGAGGGCCCAAACCCAGATATTTGCTGTCGTTGTGACAAATCGG
GACGAAATCACCCAGATGAACCAACGGACTCGGAAGAAAATGACATGTTTGTCAACCTAT
CTGGAACTCAACGTCTTATAGTGAGTTGTATGTCAGTGCTTGTGGTCGTCACTCTTTTGC
TCTTTTTCTCTCGGAATCTGATGCACAGAGCACGAGGTGCAATTATCCCGAGTCGACATA
GAAGAGATAGATCCCATAACACATGGATGTCACAACAGTCACTTCCACCTACAAGAGCCT
TCATGGGACGTTACTGTAGCAGCAGTGATCGTATGAGTTTTGTTGACCCCAATGATAGCG
AAGACATGTCCGAACCCCCACCCTCGTACAGTTCGTTGAAACCAGCCACCCGGAACGAAC
GTGGGTCAAGGTCTTCAAGCGGGGAATCACCCCCCTCGTACAACGCAAGCATCACCTTAC
CACCAGCAAGTCCAGAAGCTACGTCATCGTCGAGTGCGAACAACCGCGACGACCAGGTCA
CGCAGTCAACCGTGTCCGAACACGTGATACAATCCGAGCCAATCAGAAACGAGGAACCAA
TCAGCCCCGTTAGTACAACTTCATGCAGTCCACTACTCGTCGAGGAACACGACCAGTGAC
GTCATCACGACGTTAGAAACGATTTAGTGACGTCAGAAATAATACGTGACGTCATCCAGG
TTTAGTTTGTCTGGTTTCCCCATTTTCGTTGTTAAATTTATTGTTTAAAATTTCGGCAAC
TGATATACCGGGTTTTTGAACCTGCTGTATTTAAATAGATGCGTTCATTTTATCAGTGTT
TTTTATCGCCCGATACTTTGTTTCGCCATTTTTGATCTGTTTTTGATCAAAATATGGTCT
TCAAAGATTTATCTAGCAATTGTATCACACGTCGCATAGGTTCTTTAACACGCGTATGTG
TCGCTTTAAACTAGTTTAAACCAGTTTAAACCAGTTACAGGCGGCGCGTAATTGTGGTTT
AACCTTCAGGAGTTCGTTTGTTGAAGCGTTAAGATTCGCGGTTCTTACTGTAATTTTAGT
TGCGATTTCTTGGTTTACGCTGCGTGGTATAAAGACCTGTGTAATAGTATTACTAAGTAT
GAAACGCGTGTTAAGAAAAAAAAGAGTATATTTATTCTTTTTTTATACTGTGAATTGAGT
TGTGCTGTTTTTTTAGCACAAAGCTACGTATCTGTTGCGTAAAACTACAACGAACGATAA
AAAATCACCCAACTAGTTTTGTATGAAGTAATTGACGTTCGTTTACAGTTTACAGTTATT
TCCTAATTGCCACCATTTTTTATTTCCCACATGGTTTGTTTTCCCGCACTTTTTGCTTAA
AGCGTTCATTGTACATTCCTGTTAATTGTGAAGTTTTAAAGCCGCTGCAGAGAGAAGCTT
ATTAATAAAACTATAAACTGCAAAATAAAGGTTTTTAACAGTGGAGTTTTACACAAA
| SUPERFAMILY |
LDL_receptor-like_sf (IPR036055) - T[167-205] 2.09E-10 |
| ProSiteProfiles |
LDrepeatLR_classA_rpt (IPR002172) - T[168-204] 11.875 |
| SMART |
LDrepeatLR_classA_rpt (IPR002172) - T[168-205] 3.1E-7 |
| Pfam |
LDrepeatLR_classA_rpt (IPR002172) - T[169-203] 2.7E-8 |
| CDD |
LDrepeatLR_classA_rpt (IPR002172) - T[169-203] 2.37443E-9 |
| ProSitePatterns |
LDLR_class-A_CS (IPR023415) - T[181-203] . |
| Protein Name | Identity | Bit Score | e-value |
|---|