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  1. Transcript 'KH2012:KH.C1.29.v1.A...' > 
  2. Transcript 'KH2012:KH.C11.385.v3...'

Transcript Model

Transcript Id

KH2012:KH.C11.385.v3.B.ND1-1

Possible name(s)

CARMIL1; CARMIL2; CARMIL3

Gene model

KH2012:KH.C11.385

Location

KhC11 [5,087,091 / 5,098,136]

Sequences

Amino acid sequence

Length: 847

>KH.C11.385.v3.B.ND1-1
LIFYGFEVQCCANLIVTTDTGKIYFMQMIGTDDADHIIGRVALSLRTIFPNVALSRIIKA
SLEPLGRQKIIQSMLNQGDQSEPGPCGNFSEMYRCICDYLGAPVREEVEWDVDTIYLSQN
CKEINTKDFDLPDTKDIIPIISVMIYSQWFDGLVVRNTKLSFEVLEFILKVTRNSHNLKE
LSLEGVGIKGEFAHRLSINMIENKECRIEVLDLSGNSIEDKGLVHLSGSLPVIKHGKVNI
ITYDTGITGKSINVLCQALRSSQRIMTTLTHLNLSGNNIRPEEAEGLLNFLSTENQITDL
DLSATEGAVELYLSAIAKGCTKYLENVSLGKNVFQTNKDTAIPPSVMHYFHKTTSLKNMD
ISHTKMPPEAIRYIMDGILANKTPGLRVALNLSSCELKSMGCHIIQSCVASLTNLVSLDL
TDNMLDGDLLPLLGCMQQNRSITEFKIGRNFFGVKPKYMRQVMEGIVELMQEEDSVLQTF
CIADSKLREHLHILLGCLGSNTSLTSIDISGNYMGDNGARVLSKSLQINSKLQVVKLDRN
SLTSLGFHEVANAMEKNYTLRYMPYPVNDAVIAIKMHPERTQRSLARIQDLLLRNANATG
GSNDQQFRLQQVVTNTAQQVLDRVAEKVDDTVNALEILVEDSASNDSVITAKKLVKDAKN
SKQLLSDIYGIGMEKCSGDESPLVSKIRETAKNLNKIVEENITKTIESMMKTVEAQCPHI
FMDIREELERSIETKCQLPKDSVKDYVMHTSGSVIVNQVSELNLSMATLMSDRIADRLLG
ALSQSNLTLTDQLNRHKQKENVGKRATEDVVQVDEDGALLPDMRRNRAASIAKRKQRPDV
QSSLMT+

Nucleotide sequence

Length: 2,685

>KH2012:KH.C11.385.v3.B.ND1-1
GTAATTACTAGATTAATATTGAAATGAAACTACCTGCATTAGTTATTGAGCACGGTGTGT
TTATACATGGAGGGTAGTAGAGTGGGTGGGAGGTGTCACATCATGTACTGTTGTGCATGG
ATATAACCGGCTCTGTGGTTGAATAATTGATCTTCTATGGTTTTGAGGTTCAATGCTGCG
CGAATTTAATCGTCACCACGGACACAGGAAAGATATACTTCATGCAGATGATCGGGACGG
ATGATGCCGATCACATCATTGGGAGGGTGGCGTTGTCGCTTCGAACAATCTTCCCCAATG
TCGCGCTTTCTCGGATCATCAAAGCATCGTTGGAACCACTGGGCCGGCAGAAGATCATCC
AATCCATGCTCAACCAGGGTGACCAATCGGAACCCGGGCCGTGTGGAAACTTCTCCGAGA
TGTATCGTTGTATTTGTGACTACTTGGGGGCGCCAGTGAGGGAAGAGGTTGAATGGGATG
TAGACACGATATATTTGTCGCAAAACTGCAAGGAAATTAACACCAAGGATTTTGACTTAC
CTGATACTAAAGACATCATTCCCATTATATCAGTGATGATTTACAGCCAGTGGTTTGATG
GGTTGGTGGTCAGGAATACTAAACTGAGTTTCGAAGTGTTGGAGTTCATATTAAAAGTGA
CGCGGAACTCGCATAACTTGAAGGAGTTGTCGTTGGAGGGTGTTGGAATAAAAGGCGAGT
TTGCGCACCGTCTTTCAATCAACATGATTGAGAATAAGGAATGTAGAATCGAGGTTTTGG
ATTTATCTGGGAATTCCATTGAAGACAAAGGGCTGGTACATCTGAGTGGTTCACTCCCTG
TAATTAAACATGGAAAGGTTAATATTATCACGTATGACACAGGTATCACAGGCAAGTCAA
TCAACGTTTTATGCCAAGCTTTGCGTTCAAGTCAGCGGATTATGACAACGCTGACTCATC
TTAACTTATCGGGGAATAATATTCGTCCTGAGGAAGCTGAGGGACTTCTCAATTTCTTAT
CGACCGAAAACCAGATCACTGACCTTGACCTTTCTGCCACCGAAGGCGCTGTTGAGCTGT
ACCTCAGTGCGATAGCGAAAGGTTGCACAAAATATTTGGAAAACGTTTCGCTCGGAAAGA
ATGTTTTCCAAACAAACAAAGACACGGCCATCCCACCCTCGGTCATGCATTATTTCCACA
AAACAACTTCATTGAAAAACATGGATATCTCCCACACAAAGATGCCACCCGAAGCTATTA
GGTACATCATGGATGGGATACTTGCGAACAAAACACCCGGGTTACGAGTTGCGTTGAATC
TATCAAGTTGTGAGTTGAAATCCATGGGTTGCCACATCATCCAATCTTGCGTGGCAAGTT
TAACGAACCTCGTTTCCCTCGATCTAACCGACAATATGTTGGATGGTGACTTACTGCCTT
TACTTGGTTGTATGCAGCAAAACCGTTCGATCACTGAGTTTAAGATTGGTCGTAATTTCT
TTGGTGTGAAACCAAAGTATATGAGGCAAGTAATGGAGGGGATCGTTGAGTTGATGCAAG
AAGAAGATTCCGTCCTACAAACGTTCTGCATCGCCGATTCCAAACTCCGAGAACATCTTC
ATATTTTACTCGGATGTCTTGGGAGCAACACCTCGCTCACAAGCATCGACATCAGTGGCA
ACTACATGGGGGACAACGGGGCACGAGTGTTGTCCAAATCCCTTCAAATCAACAGCAAAC
TACAAGTTGTTAAGTTAGATAGAAACAGTCTCACATCACTGGGTTTCCATGAGGTGGCAA
ATGCTATGGAAAAGAACTACACACTACGATACATGCCGTACCCCGTCAACGATGCCGTCA
TCGCCATCAAGATGCATCCGGAACGGACACAAAGATCTCTCGCTCGCATCCAGGATTTGT
TGCTGAGGAACGCCAATGCCACCGGAGGCAGCAACGATCAGCAGTTCCGTCTTCAACAAG
TTGTAACGAACACTGCTCAACAAGTGCTCGATAGAGTGGCAGAGAAAGTCGACGACACGG
TAAACGCCCTTGAGATTTTGGTTGAAGATTCGGCTTCCAATGATTCCGTCATTACTGCTA
AGAAACTTGTCAAGGATGCAAAGAATTCCAAACAGCTTTTATCAGATATCTATGGCATTG
GGATGGAGAAGTGCTCGGGTGACGAGAGCCCTCTAGTGTCCAAGATCAGGGAAACTGCGA
AAAACTTGAATAAAATCGTCGAAGAAAATATCACGAAAACAATTGAAAGTATGATGAAAA
CAGTGGAAGCTCAATGTCCTCATATATTTATGGATATAAGGGAAGAGTTGGAAAGATCAA
TTGAAACAAAATGTCAACTCCCCAAAGATTCGGTGAAGGATTACGTGATGCATACTTCAG
GGAGTGTTATTGTTAACCAAGTCAGTGAATTAAACTTATCAATGGCAACCTTGATGTCGG
ACAGGATCGCCGATAGATTGTTGGGAGCTTTGTCGCAAAGTAATCTTACATTGACGGATC
AACTGAACAGACACAAACAGAAGGAGAATGTTGGGAAAAGAGCAACAGAGGATGTTGTTC
AAGTTGACGAGGATGGTGCGTTGCTCCCCGATATGAGGAGGAACAGGGCTGCAAGCATCG
CGAAGAGGAAACAACGACCTGATGTCCAGTCTTCCCTCATGACAG

InterProScan

PANTHER
CARMIL1 (IPR029764) - T[5-799] 4.5E-217
Gene3D
LRR_dom_sf (IPR032675) - T[89-595] 7.2E-126
Pfam
Leu-rich_rpt (IPR001611) - T[207-227] 0.024 - T[267-282] 0.019 - T[500-522] 0.018
Pfam
CARMIL_C (IPR031943) - T[714-839] 2.8E-18

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CARL1_HUMAN 39.179 % 600 0
CARL3_HUMAN 35.196 % 455 2.15E-142
CARL2_HUMAN 30.596 % 377 2.44E-113