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  1. Transcript 'KH2012:KH.L149.21.v2...' > 
  2. Transcript 'KH2012:KH.C11.385.v2...'

Transcript Model

Transcript Id

KH2012:KH.C11.385.v2.B.ND3-1

Possible name(s)

CARMIL1; CARMIL2; CARMIL3

Gene model

KH2012:KH.C11.385

Location

KhC11 [5,087,091 / 5,098,387]

Sequences

Amino acid sequence

Length: 848

>KH.C11.385.v2.B.ND3-1
KIKIFMENYRLFNKLIVTTDTGKIYFMQMIGTDDADHIIGRVALSLRTIFPNVALSRIIK
ASLEPLGRQKIIQSMLNQGDQSEPGPCGNFSEMYRCICDYLGAPVREEVEWDVDTIYLSQ
NCKEINTKDFDLPDTKDIIPIISVMIYSQWFDGLVVRNTKLSFEVLEFILKVTRNSHNLK
ELSLEGVGIKGEFAHRLSINMIENKECRIEVLDLSGNSIEDKGLVHLSGSLPVIKHGKVN
IITYDTGITGKSINVLCQALRSSQRIMTTLTHLNLSGNNIRPEEAEGLLNFLSTENQITD
LDLSATEGAVELYLSAIAKGCTKYLENVSLGKNVFQTNKDTAIPPSVMHYFHKTTSLKNM
DISHTKMPPEAIRYIMDGILANKTPGLRVALNLSSCELKSMGCHIIQSCVASLTNLVSLD
LTDNMLDGDLLPLLGCMQQNRSITEFKIGRNFFGVKPKYMRQVMEGIVELMQEEDSVLQT
FCIADSKLREHLHILLGCLGSNTSLTSIDISGNYMGDNGARVLSKSLQINSKLQVVKLDR
NSLTSLGFHEVANAMEKNYTLRYMPYPVNDAVIAIKMHPERTQRSLARIQDLLLRNANAT
GGSNDQQFRLQQVVTNTAQQVLDRVAEKVDDTVNALEILVEDSASNDSVITAKKLVKDAK
NSKQLLSDIYGIGMEKCSGDESPLVSKIRETAKNLNKIVEENITKTIESMMKTVEAQCPH
IFMDIREELERSIETKCQLPKDSVKDYVMHTSGSVIVNQVSELNLSMATLMSDRIADRLL
GALSQSNLTLTDQLNRHKQKENVGKRATEDVVQVDEDGALLPDMRRNRAASIAKRKQRPD
VQSSLMT+

Nucleotide sequence

Length: 2,648

>KH2012:KH.C11.385.v2.B.ND3-1
AACATAAACTTTATACATCTACAAATATGATTGTGAAGATTAATTAAAACAACAAAGAGA
CGAAATTATCAGCAAAACAACAGTTATTAAAACATGCTATAGATAAAAAATAAAGATATT
TATGGAAAACTATCGGCTGTTTAACAAATTAATCGTCACCACGGACACAGGAAAGATATA
CTTCATGCAGATGATCGGGACGGATGATGCCGATCACATCATTGGGAGGGTGGCGTTGTC
GCTTCGAACAATCTTCCCCAATGTCGCGCTTTCTCGGATCATCAAAGCATCGTTGGAACC
ACTGGGCCGGCAGAAGATCATCCAATCCATGCTCAACCAGGGTGACCAATCGGAACCCGG
GCCGTGTGGAAACTTCTCCGAGATGTATCGTTGTATTTGTGACTACTTGGGGGCGCCAGT
GAGGGAAGAGGTTGAATGGGATGTAGACACGATATATTTGTCGCAAAACTGCAAGGAAAT
TAACACCAAGGATTTTGACTTACCTGATACTAAAGACATCATTCCCATTATATCAGTGAT
GATTTACAGCCAGTGGTTTGATGGGTTGGTGGTCAGGAATACTAAACTGAGTTTCGAAGT
GTTGGAGTTCATATTAAAAGTGACGCGGAACTCGCATAACTTGAAGGAGTTGTCGTTGGA
GGGTGTTGGAATAAAAGGCGAGTTTGCGCACCGTCTTTCAATCAACATGATTGAGAATAA
GGAATGTAGAATCGAGGTTTTGGATTTATCTGGGAATTCCATTGAAGACAAAGGGCTGGT
ACATCTGAGTGGTTCACTCCCTGTAATTAAACATGGAAAGGTTAATATTATCACGTATGA
CACAGGTATCACAGGCAAGTCAATCAACGTTTTATGCCAAGCTTTGCGTTCAAGTCAGCG
GATTATGACAACGCTGACTCATCTTAACTTATCGGGGAATAATATTCGTCCTGAGGAAGC
TGAGGGACTTCTCAATTTCTTATCGACCGAAAACCAGATCACTGACCTTGACCTTTCTGC
CACCGAAGGCGCTGTTGAGCTGTACCTCAGTGCGATAGCGAAAGGTTGCACAAAATATTT
GGAAAACGTTTCGCTCGGAAAGAATGTTTTCCAAACAAACAAAGACACGGCCATCCCACC
CTCGGTCATGCATTATTTCCACAAAACAACTTCATTGAAAAACATGGATATCTCCCACAC
AAAGATGCCACCCGAAGCTATTAGGTACATCATGGATGGGATACTTGCGAACAAAACACC
CGGGTTACGAGTTGCGTTGAATCTATCAAGTTGTGAGTTGAAATCCATGGGTTGCCACAT
CATCCAATCTTGCGTGGCAAGTTTAACGAACCTCGTTTCCCTCGATCTAACCGACAATAT
GTTGGATGGTGACTTACTGCCTTTACTTGGTTGTATGCAGCAAAACCGTTCGATCACTGA
GTTTAAGATTGGTCGTAATTTCTTTGGTGTGAAACCAAAGTATATGAGGCAAGTAATGGA
GGGGATCGTTGAGTTGATGCAAGAAGAAGATTCCGTCCTACAAACGTTCTGCATCGCCGA
TTCCAAACTCCGAGAACATCTTCATATTTTACTCGGATGTCTTGGGAGCAACACCTCGCT
CACAAGCATCGACATCAGTGGCAACTACATGGGGGACAACGGGGCACGAGTGTTGTCCAA
ATCCCTTCAAATCAACAGCAAACTACAAGTTGTTAAGTTAGATAGAAACAGTCTCACATC
ACTGGGTTTCCATGAGGTGGCAAATGCTATGGAAAAGAACTACACACTACGATACATGCC
GTACCCCGTCAACGATGCCGTCATCGCCATCAAGATGCATCCGGAACGGACACAAAGATC
TCTCGCTCGCATCCAGGATTTGTTGCTGAGGAACGCCAATGCCACCGGAGGCAGCAACGA
TCAGCAGTTCCGTCTTCAACAAGTTGTAACGAACACTGCTCAACAAGTGCTCGATAGAGT
GGCAGAGAAAGTCGACGACACGGTAAACGCCCTTGAGATTTTGGTTGAAGATTCGGCTTC
CAATGATTCCGTCATTACTGCTAAGAAACTTGTCAAGGATGCAAAGAATTCCAAACAGCT
TTTATCAGATATCTATGGCATTGGGATGGAGAAGTGCTCGGGTGACGAGAGCCCTCTAGT
GTCCAAGATCAGGGAAACTGCGAAAAACTTGAATAAAATCGTCGAAGAAAATATCACGAA
AACAATTGAAAGTATGATGAAAACAGTGGAAGCTCAATGTCCTCATATATTTATGGATAT
AAGGGAAGAGTTGGAAAGATCAATTGAAACAAAATGTCAACTCCCCAAAGATTCGGTGAA
GGATTACGTGATGCATACTTCAGGGAGTGTTATTGTTAACCAAGTCAGTGAATTAAACTT
ATCAATGGCAACCTTGATGTCGGACAGGATCGCCGATAGATTGTTGGGAGCTTTGTCGCA
AAGTAATCTTACATTGACGGATCAACTGAACAGACACAAACAGAAGGAGAATGTTGGGAA
AAGAGCAACAGAGGATGTTGTTCAAGTTGACGAGGATGGTGCGTTGCTCCCCGATATGAG
GAGGAACAGGGCTGCAAGCATCGCGAAGAGGAAACAACGACCTGATGTCCAGTCTTCCCT
CATGACAG

InterProScan

PANTHER
CARMIL1 (IPR029764) - T[14-800] 2.3E-216
Gene3D
LRR_dom_sf (IPR032675) - T[90-596] 7.2E-126
Pfam
Leu-rich_rpt (IPR001611) - T[208-228] 0.024 - T[268-283] 0.019 - T[501-523] 0.018
Pfam
CARMIL_C (IPR031943) - T[715-840] 2.8E-18

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CARL1_HUMAN 39.394 % 598 0
CARL3_HUMAN 35.196 % 455 1.42E-142
CARL2_HUMAN 30.596 % 377 1.93E-113