- Transcript 'KH2012:KH.L116.85.v1...' >
- Transcript 'KH2012:KH.C11.385.v1...'
Transcript Model
Transcript Id
KH2012:KH.C11.385.v1.B.nonSL8-1
Possible name(s)
CARMIL1; CARMIL2; CARMIL3
Gene model
Location
KhC11 [5,087,091 / 5,101,679]
Amino acid sequence
Length: 1,073
>KH.C11.385.v1.B.nonSL8-1
CCCVDIAMEGVEIITDDGGGVYDKEAEANKPRSRPVSGEDRPLSGESLNLSGTVKRGYKM
SHIDQDAVSLSATLKRGMRNQGMLEAIPTGKTDSPGSPRGSKRFSFKSPKKSKKLSSKND
DTISIMSSAESHFNYPRGLRIEDVRGTPFDDTVSMIGGYIMDAGPFQQQDGIRDTIGRKN
IVTLKKMVKLERGNVAVDPKVLVLTPYRFQILSTKAPFKMEADIHFLEIKALDSPTPERL
IVTTDTGKIYFMQMIGTDDADHIIGRVALSLRTIFPNVALSRIIKASLEPLGRQKIIQSM
LNQGDQSEPGPCGNFSEMYRCICDYLGAPVREEVEWDVDTIYLSQNCKEINTKDFDLPDT
KDIIPIISVMIYSQWFDGLVVRNTKLSFEVLEFILKVTRNSHNLKELSLEGVGIKGEFAH
RLSINMIENKECRIEVLDLSGNSIEDKGLVHLSGSLPVIKHGKVNIITYDTGITGKSINV
LCQALRSSQRIMTTLTHLNLSGNNIRPEEAEGLLNFLSTENQITDLDLSATEGAVELYLS
AIAKGCTKYLENVSLGKNVFQTNKDTAIPPSVMHYFHKTTSLKNMDISHTKMPPEAIRYI
MDGILANKTPGLRVALNLSSCELKSMGCHIIQSCVASLTNLVSLDLTDNMLDGDLLPLLG
CMQQNRSITEFKIGRNFFGVKPKYMRQVMEGIVELMQEEDSVLQTFCIADSKLREHLHIL
LGCLGSNTSLTSIDISGNYMGDNGARVLSKSLQINSKLQVVKLDRNSLTSLGFHEVANAM
EKNYTLRYMPYPVNDAVIAIKMHPERTQRSLARIQDLLLRNANATGGSNDQQFRLQQVVT
NTAQQVLDRVAEKVDDTVNALEILVEDSASNDSVITAKKLVKDAKNSKQLLSDIYGIGME
KCSGDESPLVSKIRETAKNLNKIVEENITKTIESMMKTVEAQCPHIFMDIREELERSIET
KCQLPKDSVKDYVMHTSGSVIVNQVSELNLSMATLMSDRIADRLLGALSQSNLTLTDQLN
RHKQKENVGKRATEDVVQVDEDGALLPDMRRNRAASIAKRKQRPDVQSSLMT+
Nucleotide sequence
Length: 3,266
>KH2012:KH.C11.385.v1.B.nonSL8-1
ACTGTATACGCTTTCGCGAGTTTATAACTCAGCTTATTTGAGGCCTTAATGTTGTTGTGT
AGATATTGCTATGGAAGGGGTTGAGATTATTACAGACGATGGCGGGGGGGTGTACGACAA
GGAAGCGGAAGCTAACAAGCCAAGATCTCGCCCAGTAAGTGGGGAGGACCGCCCGCTATC
GGGGGAATCCCTCAATTTAAGCGGGACAGTTAAACGAGGTTACAAGATGTCCCACATCGA
TCAAGATGCTGTTAGTTTGAGCGCAACGTTAAAGAGAGGGATGCGGAACCAGGGCATGCT
TGAAGCGATCCCCACCGGCAAGACTGACTCTCCTGGATCACCACGTGGTTCTAAAAGGTT
CAGTTTCAAATCACCAAAGAAATCAAAGAAACTATCAAGCAAAAATGATGACACAATTAG
CATTATGAGCTCGGCAGAGTCTCATTTCAACTACCCACGAGGATTACGAATAGAGGACGT
ACGGGGAACCCCCTTCGATGATACCGTGAGCATGATCGGAGGTTACATCATGGACGCTGG
GCCTTTCCAACAGCAAGATGGAATCCGAGACACAATTGGAAGAAAGAACATTGTGACGTT
GAAGAAGATGGTTAAACTTGAACGTGGTAACGTCGCTGTGGATCCTAAAGTTCTGGTCCT
TACACCCTATAGATTCCAAATCCTTTCAACCAAAGCTCCGTTCAAGATGGAAGCTGACAT
TCACTTCTTGGAGATCAAAGCACTGGATAGCCCGACACCTGAACGGTTAATCGTCACCAC
GGACACAGGAAAGATATACTTCATGCAGATGATCGGGACGGATGATGCCGATCACATCAT
TGGGAGGGTGGCGTTGTCGCTTCGAACAATCTTCCCCAATGTCGCGCTTTCTCGGATCAT
CAAAGCATCGTTGGAACCACTGGGCCGGCAGAAGATCATCCAATCCATGCTCAACCAGGG
TGACCAATCGGAACCCGGGCCGTGTGGAAACTTCTCCGAGATGTATCGTTGTATTTGTGA
CTACTTGGGGGCGCCAGTGAGGGAAGAGGTTGAATGGGATGTAGACACGATATATTTGTC
GCAAAACTGCAAGGAAATTAACACCAAGGATTTTGACTTACCTGATACTAAAGACATCAT
TCCCATTATATCAGTGATGATTTACAGCCAGTGGTTTGATGGGTTGGTGGTCAGGAATAC
TAAACTGAGTTTCGAAGTGTTGGAGTTCATATTAAAAGTGACGCGGAACTCGCATAACTT
GAAGGAGTTGTCGTTGGAGGGTGTTGGAATAAAAGGCGAGTTTGCGCACCGTCTTTCAAT
CAACATGATTGAGAATAAGGAATGTAGAATCGAGGTTTTGGATTTATCTGGGAATTCCAT
TGAAGACAAAGGGCTGGTACATCTGAGTGGTTCACTCCCTGTAATTAAACATGGAAAGGT
TAATATTATCACGTATGACACAGGTATCACAGGCAAGTCAATCAACGTTTTATGCCAAGC
TTTGCGTTCAAGTCAGCGGATTATGACAACGCTGACTCATCTTAACTTATCGGGGAATAA
TATTCGTCCTGAGGAAGCTGAGGGACTTCTCAATTTCTTATCGACCGAAAACCAGATCAC
TGACCTTGACCTTTCTGCCACCGAAGGCGCTGTTGAGCTGTACCTCAGTGCGATAGCGAA
AGGTTGCACAAAATATTTGGAAAACGTTTCGCTCGGAAAGAATGTTTTCCAAACAAACAA
AGACACGGCCATCCCACCCTCGGTCATGCATTATTTCCACAAAACAACTTCATTGAAAAA
CATGGATATCTCCCACACAAAGATGCCACCCGAAGCTATTAGGTACATCATGGATGGGAT
ACTTGCGAACAAAACACCCGGGTTACGAGTTGCGTTGAATCTATCAAGTTGTGAGTTGAA
ATCCATGGGTTGCCACATCATCCAATCTTGCGTGGCAAGTTTAACGAACCTCGTTTCCCT
CGATCTAACCGACAATATGTTGGATGGTGACTTACTGCCTTTACTTGGTTGTATGCAGCA
AAACCGTTCGATCACTGAGTTTAAGATTGGTCGTAATTTCTTTGGTGTGAAACCAAAGTA
TATGAGGCAAGTAATGGAGGGGATCGTTGAGTTGATGCAAGAAGAAGATTCCGTCCTACA
AACGTTCTGCATCGCCGATTCCAAACTCCGAGAACATCTTCATATTTTACTCGGATGTCT
TGGGAGCAACACCTCGCTCACAAGCATCGACATCAGTGGCAACTACATGGGGGACAACGG
GGCACGAGTGTTGTCCAAATCCCTTCAAATCAACAGCAAACTACAAGTTGTTAAGTTAGA
TAGAAACAGTCTCACATCACTGGGTTTCCATGAGGTGGCAAATGCTATGGAAAAGAACTA
CACACTACGATACATGCCGTACCCCGTCAACGATGCCGTCATCGCCATCAAGATGCATCC
GGAACGGACACAAAGATCTCTCGCTCGCATCCAGGATTTGTTGCTGAGGAACGCCAATGC
CACCGGAGGCAGCAACGATCAGCAGTTCCGTCTTCAACAAGTTGTAACGAACACTGCTCA
ACAAGTGCTCGATAGAGTGGCAGAGAAAGTCGACGACACGGTAAACGCCCTTGAGATTTT
GGTTGAAGATTCGGCTTCCAATGATTCCGTCATTACTGCTAAGAAACTTGTCAAGGATGC
AAAGAATTCCAAACAGCTTTTATCAGATATCTATGGCATTGGGATGGAGAAGTGCTCGGG
TGACGAGAGCCCTCTAGTGTCCAAGATCAGGGAAACTGCGAAAAACTTGAATAAAATCGT
CGAAGAAAATATCACGAAAACAATTGAAAGTATGATGAAAACAGTGGAAGCTCAATGTCC
TCATATATTTATGGATATAAGGGAAGAGTTGGAAAGATCAATTGAAACAAAATGTCAACT
CCCCAAAGATTCGGTGAAGGATTACGTGATGCATACTTCAGGGAGTGTTATTGTTAACCA
AGTCAGTGAATTAAACTTATCAATGGCAACCTTGATGTCGGACAGGATCGCCGATAGATT
GTTGGGAGCTTTGTCGCAAAGTAATCTTACATTGACGGATCAACTGAACAGACACAAACA
GAAGGAGAATGTTGGGAAAAGAGCAACAGAGGATGTTGTTCAAGTTGACGAGGATGGTGC
GTTGCTCCCCGATATGAGGAGGAACAGGGCTGCAAGCATCGCGAAGAGGAAACAACGACC
TGATGTCCAGTCTTCCCTCATGACAG
| Gene3D |
PH-like_dom_sf (IPR011993) - T[162-271] 9.7E-27 |
| PANTHER |
CARMIL1 (IPR029764) - T[169-1025] 3.3E-234 |
| Gene3D |
LRR_dom_sf (IPR032675) - T[315-821] 1.3E-125 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[433-453] 0.031 - T[493-508] 0.025 - T[726-748] 0.023 |
| Pfam |
CARMIL_C (IPR031943) - T[940-1065] 4.0E-18 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CARL1_HUMAN | 39.145 % | 627 | 0 |
| CARL3_HUMAN | 32.497 % | 490 | 5.27E-153 |
| CARL2_HUMAN | 30.147 % | 398 | 1.09E-118 |