- Transcript 'KH2012:KH.C11.385.v1...'
Transcript Model
Transcript Id
KH2012:KH.C11.385.v1.B.nonSL4-1
Possible name(s)
CARMIL1; CARMIL2; CARMIL3
Gene model
Location
KhC11 [5,087,091 / 5,101,674]
Amino acid sequence
Length: 1,073
>KH.C11.385.v1.B.nonSL4-1
CCCVDIAMEGVEIITDDGGGVYDKEAEANKPRSRPVSGEDRPLSGESLNLSGTVKRGYKM
SHIDQDAVSLSATLKRGMRNQGMLEAIPTGKTDSPGSPRGSKRFSFKSPKKSKKLSSKND
DTISIMSSAESHFNYPRGLRIEDVRGTPFDDTVSMIGGYIMDAGPFQQQDGIRDTIGRKN
IVTLKKMVKLERGNVAVDPKVLVLTPYRFQILSTKAPFKMEADIHFLEIKALDSPTPERL
IVTTDTGKIYFMQMIGTDDADHIIGRVALSLRTIFPNVALSRIIKASLEPLGRQKIIQSM
LNQGDQSEPGPCGNFSEMYRCICDYLGAPVREEVEWDVDTIYLSQNCKEINTKDFDLPDT
KDIIPIISVMIYSQWFDGLVVRNTKLSFEVLEFILKVTRNSHNLKELSLEGVGIKGEFAH
RLSINMIENKECRIEVLDLSGNSIEDKGLVHLSGSLPVIKHGKVNIITYDTGITGKSINV
LCQALRSSQRIMTTLTHLNLSGNNIRPEEAEGLLNFLSTENQITDLDLSATEGAVELYLS
AIAKGCTKYLENVSLGKNVFQTNKDTAIPPSVMHYFHKTTSLKNMDISHTKMPPEAIRYI
MDGILANKTPGLRVALNLSSCELKSMGCHIIQSCVASLTNLVSLDLTDNMLDGDLLPLLG
CMQQNRSITEFKIGRNFFGVKPKYMRQVMEGIVELMQEEDSVLQTFCIADSKLREHLHIL
LGCLGSNTSLTSIDISGNYMGDNGARVLSKSLQINSKLQVVKLDRNSLTSLGFHEVANAM
EKNYTLRYMPYPVNDAVIAIKMHPERTQRSLARIQDLLLRNANATGGSNDQQFRLQQVVT
NTAQQVLDRVAEKVDDTVNALEILVEDSASNDSVITAKKLVKDAKNSKQLLSDIYGIGME
KCSGDESPLVSKIRETAKNLNKIVEENITKTIESMMKTVEAQCPHIFMDIREELERSIET
KCQLPKDSVKDYVMHTSGSVIVNQVSELNLSMATLMSDRIADRLLGALSQSNLTLTDQLN
RHKQKENVGKRATEDVVQVDEDGALLPDMRRNRAASIAKRKQRPDVQSSLMT+
Nucleotide sequence
Length: 3,261
>KH2012:KH.C11.385.v1.B.nonSL4-1
ATACGCTTTCGCGAGTTTATAACTCAGCTTATTTGAGGCCTTAATGTTGTTGTGTAGATA
TTGCTATGGAAGGGGTTGAGATTATTACAGACGATGGCGGGGGGGTGTACGACAAGGAAG
CGGAAGCTAACAAGCCAAGATCTCGCCCAGTAAGTGGGGAGGACCGCCCGCTATCGGGGG
AATCCCTCAATTTAAGCGGGACAGTTAAACGAGGTTACAAGATGTCCCACATCGATCAAG
ATGCTGTTAGTTTGAGCGCAACGTTAAAGAGAGGGATGCGGAACCAGGGCATGCTTGAAG
CGATCCCCACCGGCAAGACTGACTCTCCTGGATCACCACGTGGTTCTAAAAGGTTCAGTT
TCAAATCACCAAAGAAATCAAAGAAACTATCAAGCAAAAATGATGACACAATTAGCATTA
TGAGCTCGGCAGAGTCTCATTTCAACTACCCACGAGGATTACGAATAGAGGACGTACGGG
GAACCCCCTTCGATGATACCGTGAGCATGATCGGAGGTTACATCATGGACGCTGGGCCTT
TCCAACAGCAAGATGGAATCCGAGACACAATTGGAAGAAAGAACATTGTGACGTTGAAGA
AGATGGTTAAACTTGAACGTGGTAACGTCGCTGTGGATCCTAAAGTTCTGGTCCTTACAC
CCTATAGATTCCAAATCCTTTCAACCAAAGCTCCGTTCAAGATGGAAGCTGACATTCACT
TCTTGGAGATCAAAGCACTGGATAGCCCGACACCTGAACGGTTAATCGTCACCACGGACA
CAGGAAAGATATACTTCATGCAGATGATCGGGACGGATGATGCCGATCACATCATTGGGA
GGGTGGCGTTGTCGCTTCGAACAATCTTCCCCAATGTCGCGCTTTCTCGGATCATCAAAG
CATCGTTGGAACCACTGGGCCGGCAGAAGATCATCCAATCCATGCTCAACCAGGGTGACC
AATCGGAACCCGGGCCGTGTGGAAACTTCTCCGAGATGTATCGTTGTATTTGTGACTACT
TGGGGGCGCCAGTGAGGGAAGAGGTTGAATGGGATGTAGACACGATATATTTGTCGCAAA
ACTGCAAGGAAATTAACACCAAGGATTTTGACTTACCTGATACTAAAGACATCATTCCCA
TTATATCAGTGATGATTTACAGCCAGTGGTTTGATGGGTTGGTGGTCAGGAATACTAAAC
TGAGTTTCGAAGTGTTGGAGTTCATATTAAAAGTGACGCGGAACTCGCATAACTTGAAGG
AGTTGTCGTTGGAGGGTGTTGGAATAAAAGGCGAGTTTGCGCACCGTCTTTCAATCAACA
TGATTGAGAATAAGGAATGTAGAATCGAGGTTTTGGATTTATCTGGGAATTCCATTGAAG
ACAAAGGGCTGGTACATCTGAGTGGTTCACTCCCTGTAATTAAACATGGAAAGGTTAATA
TTATCACGTATGACACAGGTATCACAGGCAAGTCAATCAACGTTTTATGCCAAGCTTTGC
GTTCAAGTCAGCGGATTATGACAACGCTGACTCATCTTAACTTATCGGGGAATAATATTC
GTCCTGAGGAAGCTGAGGGACTTCTCAATTTCTTATCGACCGAAAACCAGATCACTGACC
TTGACCTTTCTGCCACCGAAGGCGCTGTTGAGCTGTACCTCAGTGCGATAGCGAAAGGTT
GCACAAAATATTTGGAAAACGTTTCGCTCGGAAAGAATGTTTTCCAAACAAACAAAGACA
CGGCCATCCCACCCTCGGTCATGCATTATTTCCACAAAACAACTTCATTGAAAAACATGG
ATATCTCCCACACAAAGATGCCACCCGAAGCTATTAGGTACATCATGGATGGGATACTTG
CGAACAAAACACCCGGGTTACGAGTTGCGTTGAATCTATCAAGTTGTGAGTTGAAATCCA
TGGGTTGCCACATCATCCAATCTTGCGTGGCAAGTTTAACGAACCTCGTTTCCCTCGATC
TAACCGACAATATGTTGGATGGTGACTTACTGCCTTTACTTGGTTGTATGCAGCAAAACC
GTTCGATCACTGAGTTTAAGATTGGTCGTAATTTCTTTGGTGTGAAACCAAAGTATATGA
GGCAAGTAATGGAGGGGATCGTTGAGTTGATGCAAGAAGAAGATTCCGTCCTACAAACGT
TCTGCATCGCCGATTCCAAACTCCGAGAACATCTTCATATTTTACTCGGATGTCTTGGGA
GCAACACCTCGCTCACAAGCATCGACATCAGTGGCAACTACATGGGGGACAACGGGGCAC
GAGTGTTGTCCAAATCCCTTCAAATCAACAGCAAACTACAAGTTGTTAAGTTAGATAGAA
ACAGTCTCACATCACTGGGTTTCCATGAGGTGGCAAATGCTATGGAAAAGAACTACACAC
TACGATACATGCCGTACCCCGTCAACGATGCCGTCATCGCCATCAAGATGCATCCGGAAC
GGACACAAAGATCTCTCGCTCGCATCCAGGATTTGTTGCTGAGGAACGCCAATGCCACCG
GAGGCAGCAACGATCAGCAGTTCCGTCTTCAACAAGTTGTAACGAACACTGCTCAACAAG
TGCTCGATAGAGTGGCAGAGAAAGTCGACGACACGGTAAACGCCCTTGAGATTTTGGTTG
AAGATTCGGCTTCCAATGATTCCGTCATTACTGCTAAGAAACTTGTCAAGGATGCAAAGA
ATTCCAAACAGCTTTTATCAGATATCTATGGCATTGGGATGGAGAAGTGCTCGGGTGACG
AGAGCCCTCTAGTGTCCAAGATCAGGGAAACTGCGAAAAACTTGAATAAAATCGTCGAAG
AAAATATCACGAAAACAATTGAAAGTATGATGAAAACAGTGGAAGCTCAATGTCCTCATA
TATTTATGGATATAAGGGAAGAGTTGGAAAGATCAATTGAAACAAAATGTCAACTCCCCA
AAGATTCGGTGAAGGATTACGTGATGCATACTTCAGGGAGTGTTATTGTTAACCAAGTCA
GTGAATTAAACTTATCAATGGCAACCTTGATGTCGGACAGGATCGCCGATAGATTGTTGG
GAGCTTTGTCGCAAAGTAATCTTACATTGACGGATCAACTGAACAGACACAAACAGAAGG
AGAATGTTGGGAAAAGAGCAACAGAGGATGTTGTTCAAGTTGACGAGGATGGTGCGTTGC
TCCCCGATATGAGGAGGAACAGGGCTGCAAGCATCGCGAAGAGGAAACAACGACCTGATG
TCCAGTCTTCCCTCATGACAG
| Gene3D |
PH-like_dom_sf (IPR011993) - T[162-271] 9.7E-27 |
| PANTHER |
CARMIL1 (IPR029764) - T[169-1025] 3.3E-234 |
| Gene3D |
LRR_dom_sf (IPR032675) - T[315-821] 1.3E-125 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[433-453] 0.031 - T[493-508] 0.025 - T[726-748] 0.023 |
| Pfam |
CARMIL_C (IPR031943) - T[940-1065] 4.0E-18 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CARL1_HUMAN | 39.145 % | 627 | 0 |
| CARL3_HUMAN | 32.497 % | 490 | 5.27E-153 |
| CARL2_HUMAN | 30.147 % | 398 | 1.09E-118 |