- Transcript 'KH2012:KH.C11.313.v2...'
Transcript Model
Transcript Id
KH2012:KH.C11.313.v2.A.SL1-2
Possible name(s)
FOXA1; FOXA2; FOXA3
Gene model
Location
KhC11 [4,402,423 / 4,404,794]
Amino acid sequence
Length: 596
>KH.C11.313.v2.A.SL1-2
NRITFASTKMMLSSPPSKYQPFQQSYATGMNNMTNGMQPSYVNQMNPMSLTAAGNQVGFN
QALPQGYGGVSFNGMGTSAMNGHSPHSVQIAAAAAAAVGSPPMGTAYAGMPTGVGITPNM
ALMLNRRTEKQYRRNYTHAKPPYSYISLITMALQSSPNKMMTLSEIYNWIMDLFPFYRQN
QQRWQNSIRHSLSFNDCFVKVPRSADKPGKGSYWSLHPDAGNMFENGCYLRRQKRFKSNK
KSKGAGPSSDEHSPLELVPNDAVSPPPSMSNPGSTHNSPHNSHETYADSDTDNKSPDLAS
STAITSHDQLYNQQHTSLGHGMLQQIPAPTHDNSSANHPSQTNNPAYPSQTDHNDKLQHH
HTQQQSAVEVSSPSNTPTSENMALNTHSLHELVPAGDKTDERTHHSIPHPMNQEHHLVGH
EQDPSHHLYSHYAQATAYAAAVQHNSFAAVAAAHSFAPHPFSISSLMNVSDPQQQHYQQH
PHHQSYTQAKDLRAYQDAVQYYNNGMNSLTGLMPPPSVNDTIPQCSIAPSGSPVNSASSS
SVSTPSPSSSSSASHYSSALHYPLHQQQQLHIPSDHLNHQPDHTESAYYPGCVPAS
Nucleotide sequence
Length: 2,371
>KH2012:KH.C11.313.v2.A.SL1-2
CTTTCTATTTGAAATATTATACACAACTGCTGCTGTAATTTCTGAGAAAGCTTTTGAAAT
CGGATTACTTTTGCAAGTACAAAAATGATGTTGTCGTCTCCACCGTCAAAGTACCAACCC
TTCCAACAGTCTTATGCTACTGGTATGAACAATATGACCAACGGTATGCAGCCTTCATAC
GTCAACCAGATGAACCCAATGTCGCTTACAGCTGCTGGCAACCAGGTCGGATTTAACCAA
GCTTTACCGCAAGGATATGGCGGCGTATCGTTTAATGGTATGGGCACAAGTGCGATGAAC
GGCCACTCACCCCACAGCGTTCAAATTGCTGCCGCGGCCGCTGCTGCTGTCGGATCCCCG
CCTATGGGCACTGCGTATGCCGGCATGCCGACGGGCGTTGGAATCACGCCGAATATGGCG
CTCATGTTAAACAGAAGGACCGAGAAGCAATACAGAAGAAACTACACCCATGCTAAGCCA
CCATACAGTTATATTTCACTCATTACAATGGCCCTACAGTCATCGCCCAACAAAATGATG
ACCTTAAGTGAAATATACAACTGGATCATGGACCTTTTTCCATTCTACCGACAAAACCAA
CAAAGATGGCAAAATTCAATCCGCCATAGCTTGTCATTCAACGATTGCTTCGTTAAAGTA
CCGAGATCGGCAGACAAACCTGGCAAAGGTTCATATTGGTCGCTACACCCAGACGCTGGA
AACATGTTCGAAAATGGCTGCTATTTGCGTCGCCAGAAAAGATTCAAAAGCAATAAGAAA
TCAAAGGGCGCTGGACCAAGCTCAGATGAACACTCACCGCTAGAACTTGTCCCCAACGAT
GCTGTCAGCCCTCCACCATCGATGTCAAACCCAGGATCCACCCACAACAGTCCACACAAC
AGTCATGAAACTTACGCAGATTCAGACACGGACAACAAGTCGCCCGACCTTGCTTCATCG
ACGGCCATAACCTCCCACGATCAGTTATACAACCAACAACACACATCGCTTGGGCATGGG
ATGCTTCAACAAATTCCAGCACCTACGCACGATAATTCCTCAGCTAACCACCCCAGCCAA
ACAAACAACCCAGCTTACCCCAGCCAAACAGATCACAACGACAAGCTTCAACACCACCAC
ACTCAACAGCAATCTGCCGTTGAAGTTAGTTCGCCATCCAACACCCCAACCTCAGAGAAC
ATGGCATTGAACACGCATTCCTTGCATGAGTTGGTTCCAGCTGGGGATAAAACCGACGAG
AGAACCCACCATAGCATTCCACACCCCATGAACCAGGAGCATCATTTAGTCGGCCATGAA
CAAGACCCATCACATCACCTGTATTCTCATTACGCCCAAGCAACAGCATATGCCGCTGCA
GTTCAACACAACTCGTTCGCTGCTGTAGCCGCCGCGCATTCTTTTGCACCACACCCATTT
TCGATCAGCAGTCTTATGAATGTTTCAGACCCTCAGCAACAGCATTATCAGCAGCACCCT
CACCACCAGAGCTACACCCAAGCAAAAGACCTACGAGCTTACCAAGACGCAGTGCAATAT
TACAACAACGGAATGAACTCTCTCACTGGCTTGATGCCACCACCATCAGTGAATGACACT
ATCCCTCAGTGTTCTATCGCGCCCTCAGGCTCGCCGGTAAATTCAGCTTCCTCGTCATCA
GTGTCCACTCCGTCTCCTTCGTCGTCTTCATCAGCTTCCCATTATTCCAGTGCTTTACAC
TACCCGCTCCACCAACAGCAGCAACTTCACATACCCAGTGACCACCTCAACCACCAGCCC
GACCACACCGAATCTGCATACTACCCAGGGTGCGTACCAGCAAGCTAAGGCAAGCCAGCA
CGTACTAAGCTGTACTAATACTATAAAAACGGTGCATGCCAGTAACTGTATACACAGCAT
GGAGCCCAAGGCTTCTCGCATGCATTTCGTGCCAAAACCCTCAGTGTCGAAGATTTGGTT
TGATACGAATCATAAACACTGTGTATTGGCATCTCTACCGATATAGTTTCTTTTCTTTGT
GCTTGCTTTTGTCTATTTATTGTTTTGTTTGTTTGCCCGCTTTTTCTAACTGTTAAAGCA
ATATACCAATTGCATCTCACTCCCAAATAACACAAATGTTGCATTAAATACACAATAACT
GCTGCAAAAATTTGTCTCTTTCAATTCTAACACTTTCGCTCAACTGCTATATAAATACCG
GCCAACACAAAACTGTGCAATTTCTTTGCATGTTTTCGTTTCTCATTCGCTCATAGTTTC
TCAATATACACCTTTCGTCGGCCGCTTAAAAGCAATATTTGCCACATTGAATACTGTGCA
CATCAATTTTGTAAATAAACCTTGTTTTTGT
| Pfam |
Fork-head_N (IPR013638) - T[17-139] 8.3E-18 |
| SMART |
Fork_head_dom (IPR001766) - T[138-228] 6.1E-61 |
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[138-239] 6.0E-47 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[140-234] 2.68E-40 |
| Pfam |
Fork_head_dom (IPR001766) - T[140-224] 4.0E-38 |
| ProSitePatterns |
TF_fork_head_CS_1 (IPR018122) - T[140-153] . |
| ProSiteProfiles |
Fork_head_dom (IPR001766) - T[140-234] 39.348 |
| PRINTS |
Fork_head_dom (IPR001766) - T[140-153] 3.1E-23 - T[161-178] 3.1E-23 - T[184-201] 3.1E-23 |
| CDD |
Fork_head_dom (IPR001766) - T[140-217] 1.03292E-49 |
| ProSitePatterns |
TF_fork_head_CS_2 (IPR030456) - T[184-190] . |
| Pfam |
Forkhead_box_C (IPR018533) - T[459-557] 5.9E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FOXA3_HUMAN | 75.397 % | 217 | 2.59E-65 |
| FOXA2_HUMAN | 86.087 % | 233 | 5.87E-70 |
| FOXA1_HUMAN | 57.767 % | 224 | 1.91E-66 |