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- Transcript 'KH2012:KH.C11.313.v1...'
Transcript Model
Transcript Id
KH2012:KH.C11.313.v1.A.SL1-1
Possible name(s)
FOXA1; FOXA2; FOXA3
Gene model
Location
KhC11 [4,395,578 / 4,404,794]
Amino acid sequence
Length: 642
>KH.C11.313.v1.A.SL1-1
NRITFASTKMMLSSPPSKYQPFQQSYATGMNNMTNGMQPSYVNQMNPMSLTAAGNQVGFN
QALPQGYGGVSFNGMGTSAMNGHSPHSVQIAAAAAAAVGSPPMGTAYAGMPTGVGITPNM
ALMLNRRTEKQYRRNYTHAKPPYSYISLITMALQSSPNKMMTLSEIYNWIMDLFPFYRQN
QQRWQNSIRHSLSFNDCFVKVPRSADKPGKGSYWSLHPDAGNMFENGCYLRRQKRFKSNK
KSKGAGPSSDEHSPLELVPNDAVSPPPSMSNPGSTHNSPHNSHETYADSDTDNKSPDLAS
STAITSHDQLYNQQHTSLGHGMLQQIPAPTHDNSSANHPSQTNNPAYPSQTDHNDKLQHH
HTQQQSAVEVSSPSNTPTSENMALNTHSLHELVPAGDKTDERTHHSIPHPMNQEHHLVGH
EQDPSHHLYSHYAQATAYAAAVQHNSFAAVAAAHSFAPHPFSISSLMNVSDPQQQHYQQH
PHHQSYTQAKDLRAYQDAVQYYNNGMNSLTGLMPPPSVNDTIPQCSIAPSGSPVNSASSS
SVSTPSPSSSSSASHYSSALHYPLHQQQQLHIPSDHLNHQPDHTESAYYPGNRSSCREAR
SNTENPRGLAYPGGPHRLHHVRSHIFGSKRSSKATAMNYMMR
Nucleotide sequence
Length: 2,529
>KH2012:KH.C11.313.v1.A.SL1-1
CTTTCTATTTGAAATATTATACACAACTGCTGCTGTAATTTCTGAGAAAGCTTTTGAAAT
CGGATTACTTTTGCAAGTACAAAAATGATGTTGTCGTCTCCACCGTCAAAGTACCAACCC
TTCCAACAGTCTTATGCTACTGGTATGAACAATATGACCAACGGTATGCAGCCTTCATAC
GTCAACCAGATGAACCCAATGTCGCTTACAGCTGCTGGCAACCAGGTCGGATTTAACCAA
GCTTTACCGCAAGGATATGGCGGCGTATCGTTTAATGGTATGGGCACAAGTGCGATGAAC
GGCCACTCACCCCACAGCGTTCAAATTGCTGCCGCGGCCGCTGCTGCTGTCGGATCCCCG
CCTATGGGCACTGCGTATGCCGGCATGCCGACGGGCGTTGGAATCACGCCGAATATGGCG
CTCATGTTAAACAGAAGGACCGAGAAGCAATACAGAAGAAACTACACCCATGCTAAGCCA
CCATACAGTTATATTTCACTCATTACAATGGCCCTACAGTCATCGCCCAACAAAATGATG
ACCTTAAGTGAAATATACAACTGGATCATGGACCTTTTTCCATTCTACCGACAAAACCAA
CAAAGATGGCAAAATTCAATCCGCCATAGCTTGTCATTCAACGATTGCTTCGTTAAAGTA
CCGAGATCGGCAGACAAACCTGGCAAAGGTTCATATTGGTCGCTACACCCAGACGCTGGA
AACATGTTCGAAAATGGCTGCTATTTGCGTCGCCAGAAAAGATTCAAAAGCAATAAGAAA
TCAAAGGGCGCTGGACCAAGCTCAGATGAACACTCACCGCTAGAACTTGTCCCCAACGAT
GCTGTCAGCCCTCCACCATCGATGTCAAACCCAGGATCCACCCACAACAGTCCACACAAC
AGTCATGAAACTTACGCAGATTCAGACACGGACAACAAGTCGCCCGACCTTGCTTCATCG
ACGGCCATAACCTCCCACGATCAGTTATACAACCAACAACACACATCGCTTGGGCATGGG
ATGCTTCAACAAATTCCAGCACCTACGCACGATAATTCCTCAGCTAACCACCCCAGCCAA
ACAAACAACCCAGCTTACCCCAGCCAAACAGATCACAACGACAAGCTTCAACACCACCAC
ACTCAACAGCAATCTGCCGTTGAAGTTAGTTCGCCATCCAACACCCCAACCTCAGAGAAC
ATGGCATTGAACACGCATTCCTTGCATGAGTTGGTTCCAGCTGGGGATAAAACCGACGAG
AGAACCCACCATAGCATTCCACACCCCATGAACCAGGAGCATCATTTAGTCGGCCATGAA
CAAGACCCATCACATCACCTGTATTCTCATTACGCCCAAGCAACAGCATATGCCGCTGCA
GTTCAACACAACTCGTTCGCTGCTGTAGCCGCCGCGCATTCTTTTGCACCACACCCATTT
TCGATCAGCAGTCTTATGAATGTTTCAGACCCTCAGCAACAGCATTATCAGCAGCACCCT
CACCACCAGAGCTACACCCAAGCAAAAGACCTACGAGCTTACCAAGACGCAGTGCAATAT
TACAACAACGGAATGAACTCTCTCACTGGCTTGATGCCACCACCATCAGTGAATGACACT
ATCCCTCAGTGTTCTATCGCGCCCTCAGGCTCGCCGGTAAATTCAGCTTCCTCGTCATCA
GTGTCCACTCCGTCTCCTTCGTCGTCTTCATCAGCTTCCCATTATTCCAGTGCTTTACAC
TACCCGCTCCACCAACAGCAGCAACTTCACATACCCAGTGACCACCTCAACCACCAGCCC
GACCACACCGAATCTGCATACTACCCAGGAAATCGCTCATCGTGTAGAGAAGCAAGGTCA
AATACTGAAAACCCACGAGGACTCGCCTACCCAGGGGGGCCCCATCGCTTACACCACGTT
AGAAGCCACATATTTGGCTCCAAACGATCCAGCAAAGCCACTGCCATGAATTATATGATG
CGATGACGCAAATATTGATCTGTGACAACAGATATTGTCATGTTTCTTTCCACCGTTGTT
GGACGAAGCCTTTAGCGTACAGCGGTGGCTGCATACCTCTACACACAGTACTTTCAAAGT
AATTATAAATCAAAAAGGTAAAATTCAAATTAGGTTTCAGTTCTCATGTACTAAATAAAT
CATTACGAAAAAACTGCTTTTAAAACGTAAGGTTTTAAGTCCCTATTTAATATTATCCAT
CGAAAAGCTAAATCTTAACGTTATCAGTTCATAAGTTCAACTTCTCATTCTTATTCCATG
ACTACTGCTTTCTTTTATGTCTACCCTATAAGAAGTATCCCTCCACGGGCATTGTATGAG
TTGGTCGAAGCGTCTTTGCATTTTATTTACAAAGTGTTTGGTAATATTGACAACAACGCC
AATACGGGTAGTTACTTCCCTGCTTTTTTTCAATACGGTAGACTATTTCCAGCTTTTTGC
GTTGATTTTTATTCTTTTATTGTTGAATATGTTTCAAGTGTCTTAAATAAATAAACGAAT
CAATAAAAA
| Pfam |
Fork-head_N (IPR013638) - T[17-139] 9.4E-18 |
| SMART |
Fork_head_dom (IPR001766) - T[138-228] 6.1E-61 |
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[138-239] 6.7E-47 |
| ProSitePatterns |
TF_fork_head_CS_1 (IPR018122) - T[140-153] . |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[140-234] 2.99E-40 |
| Pfam |
Fork_head_dom (IPR001766) - T[140-224] 4.5E-38 |
| ProSiteProfiles |
Fork_head_dom (IPR001766) - T[140-234] 39.348 |
| PRINTS |
Fork_head_dom (IPR001766) - T[140-153] 3.8E-23 - T[161-178] 3.8E-23 - T[184-201] 3.8E-23 |
| CDD |
Fork_head_dom (IPR001766) - T[140-217] 3.30843E-49 |
| ProSitePatterns |
TF_fork_head_CS_2 (IPR030456) - T[184-190] . |
| Pfam |
Forkhead_box_C (IPR018533) - T[459-557] 6.6E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FOXA3_HUMAN | 75.397 % | 217 | 8.36E-65 |
| FOXA2_HUMAN | 86.087 % | 232 | 2.28E-69 |
| FOXA1_HUMAN | 57.767 % | 223 | 7.14E-66 |