Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 642

>KH.C11.313.v1.A.nonSL2-1
NRITFASTKMMLSSPPSKYQPFQQSYATGMNNMTNGMQPSYVNQMNPMSLTAAGNQVGFN
QALPQGYGGVSFNGMGTSAMNGHSPHSVQIAAAAAAAVGSPPMGTAYAGMPTGVGITPNM
ALMLNRRTEKQYRRNYTHAKPPYSYISLITMALQSSPNKMMTLSEIYNWIMDLFPFYRQN
QQRWQNSIRHSLSFNDCFVKVPRSADKPGKGSYWSLHPDAGNMFENGCYLRRQKRFKSNK
KSKGAGPSSDEHSPLELVPNDAVSPPPSMSNPGSTHNSPHNSHETYADSDTDNKSPDLAS
STAITSHDQLYNQQHTSLGHGMLQQIPAPTHDNSSANHPSQTNNPAYPSQTDHNDKLQHH
HTQQQSAVEVSSPSNTPTSENMALNTHSLHELVPAGDKTDERTHHSIPHPMNQEHHLVGH
EQDPSHHLYSHYAQATAYAAAVQHNSFAAVAAAHSFAPHPFSISSLMNVSDPQQQHYQQH
PHHQSYTQAKDLRAYQDAVQYYNNGMNSLTGLMPPPSVNDTIPQCSIAPSGSPVNSASSS
SVSTPSPSSSSSASHYSSALHYPLHQQQQLHIPSDHLNHQPDHTESAYYPGNRSSCREAR
SNTENPRGLAYPGGPHRLHHVRSHIFGSKRSSKATAMNYMMR

Nucleotide sequence

Length: 2,528

>KH2012:KH.C11.313.v1.A.nonSL2-1
TTTCTATTTGAAATATTATACACAACTGCTGCTGTAATTTCTGAGAAAGCTTTTGAAATC
GGATTACTTTTGCAAGTACAAAAATGATGTTGTCGTCTCCACCGTCAAAGTACCAACCCT
TCCAACAGTCTTATGCTACTGGTATGAACAATATGACCAACGGTATGCAGCCTTCATACG
TCAACCAGATGAACCCAATGTCGCTTACAGCTGCTGGCAACCAGGTCGGATTTAACCAAG
CTTTACCGCAAGGATATGGCGGCGTATCGTTTAATGGTATGGGCACAAGTGCGATGAACG
GCCACTCACCCCACAGCGTTCAAATTGCTGCCGCGGCCGCTGCTGCTGTCGGATCCCCGC
CTATGGGCACTGCGTATGCCGGCATGCCGACGGGCGTTGGAATCACGCCGAATATGGCGC
TCATGTTAAACAGAAGGACCGAGAAGCAATACAGAAGAAACTACACCCATGCTAAGCCAC
CATACAGTTATATTTCACTCATTACAATGGCCCTACAGTCATCGCCCAACAAAATGATGA
CCTTAAGTGAAATATACAACTGGATCATGGACCTTTTTCCATTCTACCGACAAAACCAAC
AAAGATGGCAAAATTCAATCCGCCATAGCTTGTCATTCAACGATTGCTTCGTTAAAGTAC
CGAGATCGGCAGACAAACCTGGCAAAGGTTCATATTGGTCGCTACACCCAGACGCTGGAA
ACATGTTCGAAAATGGCTGCTATTTGCGTCGCCAGAAAAGATTCAAAAGCAATAAGAAAT
CAAAGGGCGCTGGACCAAGCTCAGATGAACACTCACCGCTAGAACTTGTCCCCAACGATG
CTGTCAGCCCTCCACCATCGATGTCAAACCCAGGATCCACCCACAACAGTCCACACAACA
GTCATGAAACTTACGCAGATTCAGACACGGACAACAAGTCGCCCGACCTTGCTTCATCGA
CGGCCATAACCTCCCACGATCAGTTATACAACCAACAACACACATCGCTTGGGCATGGGA
TGCTTCAACAAATTCCAGCACCTACGCACGATAATTCCTCAGCTAACCACCCCAGCCAAA
CAAACAACCCAGCTTACCCCAGCCAAACAGATCACAACGACAAGCTTCAACACCACCACA
CTCAACAGCAATCTGCCGTTGAAGTTAGTTCGCCATCCAACACCCCAACCTCAGAGAACA
TGGCATTGAACACGCATTCCTTGCATGAGTTGGTTCCAGCTGGGGATAAAACCGACGAGA
GAACCCACCATAGCATTCCACACCCCATGAACCAGGAGCATCATTTAGTCGGCCATGAAC
AAGACCCATCACATCACCTGTATTCTCATTACGCCCAAGCAACAGCATATGCCGCTGCAG
TTCAACACAACTCGTTCGCTGCTGTAGCCGCCGCGCATTCTTTTGCACCACACCCATTTT
CGATCAGCAGTCTTATGAATGTTTCAGACCCTCAGCAACAGCATTATCAGCAGCACCCTC
ACCACCAGAGCTACACCCAAGCAAAAGACCTACGAGCTTACCAAGACGCAGTGCAATATT
ACAACAACGGAATGAACTCTCTCACTGGCTTGATGCCACCACCATCAGTGAATGACACTA
TCCCTCAGTGTTCTATCGCGCCCTCAGGCTCGCCGGTAAATTCAGCTTCCTCGTCATCAG
TGTCCACTCCGTCTCCTTCGTCGTCTTCATCAGCTTCCCATTATTCCAGTGCTTTACACT
ACCCGCTCCACCAACAGCAGCAACTTCACATACCCAGTGACCACCTCAACCACCAGCCCG
ACCACACCGAATCTGCATACTACCCAGGAAATCGCTCATCGTGTAGAGAAGCAAGGTCAA
ATACTGAAAACCCACGAGGACTCGCCTACCCAGGGGGGCCCCATCGCTTACACCACGTTA
GAAGCCACATATTTGGCTCCAAACGATCCAGCAAAGCCACTGCCATGAATTATATGATGC
GATGACGCAAATATTGATCTGTGACAACAGATATTGTCATGTTTCTTTCCACCGTTGTTG
GACGAAGCCTTTAGCGTACAGCGGTGGCTGCATACCTCTACACACAGTACTTTCAAAGTA
ATTATAAATCAAAAAGGTAAAATTCAAATTAGGTTTCAGTTCTCATGTACTAAATAAATC
ATTACGAAAAAACTGCTTTTAAAACGTAAGGTTTTAAGTCCCTATTTAATATTATCCATC
GAAAAGCTAAATCTTAACGTTATCAGTTCATAAGTTCAACTTCTCATTCTTATTCCATGA
CTACTGCTTTCTTTTATGTCTACCCTATAAGAAGTATCCCTCCACGGGCATTGTATGAGT
TGGTCGAAGCGTCTTTGCATTTTATTTACAAAGTGTTTGGTAATATTGACAACAACGCCA
ATACGGGTAGTTACTTCCCTGCTTTTTTTCAATACGGTAGACTATTTCCAGCTTTTTGCG
TTGATTTTTATTCTTTTATTGTTGAATATGTTTCAAGTGTCTTAAATAAATAAACGAATC
AATAAAAA

InterProScan

Pfam	Fork-head_N (IPR013638) - T[17-139] 9.4E-18
SMART	Fork_head_dom (IPR001766) - T[138-228] 6.1E-61
Gene3D	WH-like_DNA-bd_sf (IPR036388) - T[138-239] 6.7E-47
ProSitePatterns	TF_fork_head_CS_1 (IPR018122) - T[140-153] .
SUPERFAMILY	WH_DNA-bd_sf (IPR036390) - T[140-234] 2.99E-40
Pfam	Fork_head_dom (IPR001766) - T[140-224] 4.5E-38
ProSiteProfiles	Fork_head_dom (IPR001766) - T[140-234] 39.348
PRINTS	Fork_head_dom (IPR001766) - T[140-153] 3.8E-23 - T[161-178] 3.8E-23 - T[184-201] 3.8E-23
CDD	Fork_head_dom (IPR001766) - T[140-217] 3.30843E-49
ProSitePatterns	TF_fork_head_CS_2 (IPR030456) - T[184-190] .
Pfam	Forkhead_box_C (IPR018533) - T[459-557] 6.6E-14