- Transcript 'KH2012:KH.C1.1265.v1...'
Transcript Model
Transcript Id
KH2012:KH.C1.1265.v1.A.SL1-1
Possible name(s)
AF241726.2; TSPAN6; TSPAN7
Gene model
Location
KhC1 [5,590,797 / 5,593,860]
Amino acid sequence
Length: 273
>KH.C1.1265.v1.A.SL1-1
VQLLATVTVIGTKFVKMVSRSMKTTPAVTCMKTLLAIFTLIFLVIGIALLVAGTYSKISL
TSYNLLSTTDFTSVPYVMIGVGAFIVVVGLAGCCATMKGNTCLLRTYAVCLGVVFLAEVV
GALAVIISRNKINNGFEAGMQNAMKKYKTDGAYKTAVDNAQKTLHCCGSNNYTDYYTLPG
WNPNTVPMSCCSNLTYCKEHLVDNKVEIVGLPTQDASEYVYNQGCPQLVFGVVNKNLGIV
IGSMFGVAFFQLVGLILSCCLASSINANKYELV
Nucleotide sequence
Length: 1,305
>KH2012:KH.C1.1265.v1.A.SL1-1
AAATAAATTGCACGTAGGTAAAATAAGTACAGCTGTTGGCTACTGTTACTGTTATAGGAA
CAAAGTTCGTCAAAATGGTGTCCAGATCAATGAAAACAACTCCTGCAGTTACTTGCATGA
AAACGCTACTTGCAATTTTTACATTGATATTCCTGGTTATTGGTATAGCATTGTTGGTGG
CTGGAACATACAGCAAGATCAGCCTCACAAGTTATAACTTGCTCTCGACAACTGATTTTA
CCAGTGTTCCCTATGTTATGATAGGTGTTGGCGCTTTCATAGTAGTTGTTGGGTTGGCTG
GATGCTGTGCTACTATGAAAGGAAACACTTGTTTACTGAGAACATATGCTGTATGCCTCG
GTGTAGTGTTCCTGGCCGAGGTTGTTGGAGCCCTTGCTGTAATAATTTCTCGAAACAAGA
TCAACAACGGCTTTGAGGCAGGCATGCAAAATGCGATGAAGAAGTACAAGACAGATGGGG
CATATAAAACTGCTGTGGATAATGCTCAAAAAACACTGCACTGCTGTGGTTCAAACAACT
ATACTGACTACTATACCCTGCCGGGTTGGAATCCAAATACTGTTCCAATGAGTTGTTGCT
CCAACCTAACCTACTGTAAGGAGCATTTGGTGGATAATAAGGTTGAAATTGTGGGACTTC
CAACACAAGATGCTTCAGAGTATGTCTACAATCAGGGATGTCCTCAGTTAGTCTTTGGAG
TTGTGAACAAAAACCTTGGAATAGTCATCGGCTCAATGTTTGGTGTTGCTTTCTTTCAGC
TGGTCGGCCTAATTTTGTCCTGCTGTCTTGCATCAAGCATCAACGCAAATAAATACGAGT
TAGTTTAGTTGGCAACCATCACTCTTCAATCGTCCGTCCCTGTTTGTTGCTTAGCAGCTG
TAACAGTTGTACGTTCACTAGACGTATACGGGCATTCGTAAATATAACAACCTCCATTAA
TTATAAATTGGCAACTGACTATATTGCACTTTCTGTTCCTTTTTTTCTTGCCGCAAGTGT
AATTGCCTGAAATTGTAATATGTTTCAAACCATTATTAGTACCTATGTATCGTATAATTT
CACTCAGTGTTGTTAATTCATTTTACTGGCCCCTATTGAACTGTTCTTTATAGTGCAGTG
TTGTTAGCGGAGTGTTTATATTAATTACACATTGCATCACCGATCTGTAAGATTCGTCTT
GCCATCCTAATTAATCCATCGTCATTTGTAAATAACCCAGTAACCACTTATGTAACCTGT
CGTGTGTTTATAATATACATTATAATAAACTGCATGTCTGTGAAA
| PIRSF |
Tetraspanin (IPR000301) - T[22-272] 2.5E-48 |
| Pfam |
Tetraspanin/Peripherin (IPR018499) - T[32-263] 1.9E-47 |
| PRINTS |
Tetraspanin (IPR000301) - T[33-56] 8.6E-33 - T[71-97] 8.6E-33 - T[98-126] 8.6E-33 - T[239-265] 8.6E-33 |
| ProSitePatterns |
Tetraspanin_CS (IPR018503) - T[82-104] . |
| Gene3D |
Tetraspanin_EC2_sf (IPR008952) - T[127-208] 1.3E-13 |
| SUPERFAMILY |
Tetraspanin_EC2_sf (IPR008952) - T[129-237] 6.28E-15 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TSN6_HUMAN | 37.891 % | 183 | 2.65E-57 |
| TSN7_HUMAN | 40.078 % | 200 | 5.19E-64 |
| CD63_HUMAN | 29.762 % | 140 | 1.69E-40 |